Cow genome map
| Conread name: | Pig1-129C12 |
| Conread position: | 37-191 |
| Cow position: | chr29:26898165-26898006 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 37-237 |
| Cow position: | chr29:40587684-40587882 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 136, 13 |
| Conread position: | 37-317 |
| Cow position: | chr29:16478667-16478384 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 128, 21 |
| Conread position: | 37-344 |
| Cow position: | chr29:32104031-32104319 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 131 |
| Conread position: | 37-480 |
| Cow position: | chr29:36638491-36638932 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 58 |
| Conread position: | 37-486 |
| Cow position: | chr29:26596609-26597060 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 305 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 106, 18 |
| Conread position: | 37-486 |
| Cow position: | chr29:28847477-28847005 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 38-196 |
| Cow position: | chr29:3366174-3366017 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 12 |
| Conread position: | 38-218 |
| Cow position: | chr29:31235922-31236105 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 166 |
| Conread position: | 38-225 |
| Cow position: | chr29:32294534-32294345 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 125, 12 |
| Conread position: | 38-237 |
| Cow position: | chr29:14499530-14499330 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 38-477 |
| Cow position: | chr29:5624292-5624751 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 16 |
| Conread position: | 38-486 |
| Cow position: | chr29:44693033-44693470 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 287 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 144, 16 |
| Conread position: | 40-486 |
| Cow position: | chr29:15852202-15852673 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 46-237 |
| Cow position: | chr29:17212040-17212229 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 47-455 |
| Cow position: | chr29:18183327-18182910 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 48 |
| Conread position: | 47-480 |
| Cow position: | chr29:5523030-5523467 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 312 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 47-488 |
| Cow position: | chr29:33434846-33435313 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 83 |
| Conread position: | 47-491 |
| Cow position: | chr29:28794458-28794925 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 47 |
| Conread position: | 47-491 |
| Cow position: | chr29:30723213-30723665 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 311 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 117, 156 |
| Conread position: | 50-240 |
| Cow position: | chr29:20705986-20706170 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 116, 51 |
| Conread position: | 54-232 |
| Cow position: | chr29:16898204-16898023 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 112, 149 |
| Conread position: | 58-477 |
| Cow position: | chr29:30651800-30651388 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 278 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 43, 145 |
| Conread position: | 58-486 |
| Cow position: | chr29:8941048-8940620 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 296 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 103, 141 |
| Conread position: | 68-355 |
| Cow position: | chr29:17102250-17102543 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 75-486 |
| Cow position: | chr29:12897454-12897039 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 127 |
| Conread position: | 130-491 |
| Cow position: | chr29:30691372-30690988 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 74 |
| Conread position: | 161-486 |
| Cow position: | chr29:6389666-6390010 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 56, 38 |
| Conread position: | 222-459 |
| Cow position: | chr29:31236299-31236557 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 256-376 |
| Cow position: | chr29:26897972-26897842 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 257-411 |
| Cow position: | chr29:30715011-30714849 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 258-420 |
| Cow position: | chr29:31218535-31218705 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 258-467 |
| Cow position: | chr29:2199129-2198918 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 91, 24 |
Show alignments to all cow chromosomes.