Cow genome map


           Conread name:
           Pig1-129C12
        

               Conread position:
               6-374
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               158, 28
               

               Conread position:
               15-344
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               75, 35
               

               Conread position:
               26-480
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               309
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               140, 28
               

               Conread position:
               37-237
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 168
               

               Conread position:
               37-244
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               124, 13
               

               Conread position:
               37-347
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 17
               

               Conread position:
               37-486
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               137, 43
               

               Conread position:
               38-151
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               38-226
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               38-232
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               38-234
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               120, 167
               

               Conread position:
               38-234
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               122, 16
               

               Conread position:
               38-237
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               38-240
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               136, 16
               

               Conread position:
               38-243
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               136, 12
               

               Conread position:
               38-344
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               19, 166
               

               Conread position:
               38-376
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               246
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               123, 159
               

               Conread position:
               38-476
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 19
               

               Conread position:
               38-485
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               322
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               38-486
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               144, 12
               

               Conread position:
               38-486
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               295
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               136, 200
               

               Conread position:
               38-487
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               303
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               105, 12
               

               Conread position:
               38-536
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 27
               

               Conread position:
               39-298
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               127, 15
               

               Conread position:
               39-390
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               124, 16
               

               Conread position:
               39-487
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               124, 16
               

               Conread position:
               39-506
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 168
               

               Conread position:
               42-239
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               121, 12
               

               Conread position:
               42-477
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 12
               

               Conread position:
               42-486
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 163
               

               Conread position:
               46-402
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 199
               

               Conread position:
               47-215
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               92, 148
               

               Conread position:
               47-234
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               116, 155
               

               Conread position:
               47-342
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               182, 66
               

               Conread position:
               47-464
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               304
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               102, 155
               

               Conread position:
               47-486
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 157
               

               Conread position:
               47-486
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 154
               

               Conread position:
               50-193
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               113, 139
               

               Conread position:
               50-240
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               110, 151
               

               Conread position:
               50-243
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               124, 188
               

               Conread position:
               51-234
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               112, 155
               

               Conread position:
               51-480
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               277
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               111, 82
               

               Conread position:
               56-240
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               120, 113
               

               Conread position:
               57-505
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 97
               

               Conread position:
               64-240
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               65-402
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               109, 61
               

               Conread position:
               66-233
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               100, 140
               

               Conread position:
               69-238
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               94, 111
               

               Conread position:
               71-486
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               9, 133
               

               Conread position:
               71-486
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               92, 104
               

               Conread position:
               76-486
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               296
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               151, 91
               

               Conread position:
               133-343
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               30, 72
               

               Conread position:
               138-486
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 119
               

               Conread position:
               153-491
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               186-486
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 15
               

               Conread position:
               206-480
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               18, 49
               

               Conread position:
               243-477
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               111, 11
               

               Conread position:
               248-486
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               50, 145
               

               Conread position:
               249-420
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 148
               

               Conread position:
               249-510
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               98, 37
               

               Conread position:
               257-480
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               73, 218
               

               Conread position:
               257-480
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               88, 145
               

               Conread position:
               257-485
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               56, 128
               

               Conread position:
               257-486
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 62
               

               Conread position:
               257-486
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               257-486
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 155
               

               Conread position:
               264-486
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               81, 215
               

               Conread position:
               287-500
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               58, 20
               

               Conread position:
               334-486
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 0
               
Show alignments to all cow chromosomes.