Cow genome map
| Conread name: | Pig1-129C12 |
| Conread position: | 7-240 |
| Cow position: | chr4:31596382-31596614 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 175, 15 |
| Conread position: | 26-486 |
| Cow position: | chr4:14423888-14424341 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 133, 11 |
| Conread position: | 32-240 |
| Cow position: | chr4:64152927-64152719 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 142, 15 |
| Conread position: | 37-148 |
| Cow position: | chr4:67562363-67562474 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-237 |
| Cow position: | chr4:7160268-7160470 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 145, 13 |
| Conread position: | 37-346 |
| Cow position: | chr4:32310431-32310130 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 126, 13 |
| Conread position: | 37-486 |
| Cow position: | chr4:43420387-43420834 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 37-486 |
| Cow position: | chr4:58431392-58431865 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 208 |
| Conread position: | 38-224 |
| Cow position: | chr4:45451743-45451560 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 126, 31 |
| Conread position: | 38-240 |
| Cow position: | chr4:7983734-7983531 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 125, 9 |
| Conread position: | 38-240 |
| Cow position: | chr4:36494006-36494214 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 167 |
| Conread position: | 38-240 |
| Cow position: | chr4:63585962-63586167 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 136, 12 |
| Conread position: | 38-244 |
| Cow position: | chr4:6654720-6654931 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 133 |
| Conread position: | 38-486 |
| Cow position: | chr4:14479949-14480407 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 38-486 |
| Cow position: | chr4:23122237-23122676 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 136, 210 |
| Conread position: | 38-486 |
| Cow position: | chr4:47132845-47132406 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 136, 205 |
| Conread position: | 38-486 |
| Cow position: | chr4:61152495-61152024 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 169 |
| Conread position: | 39-310 |
| Cow position: | chr4:10418983-10419252 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 127, 15 |
| Conread position: | 40-488 |
| Cow position: | chr4:54141710-54142173 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 39 |
| Conread position: | 42-416 |
| Cow position: | chr4:38925932-38925538 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 42-480 |
| Cow position: | chr4:29905347-29905773 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 309 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 13, 161 |
| Conread position: | 42-486 |
| Cow position: | chr4:59532002-59531555 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 12 |
| Conread position: | 42-505 |
| Cow position: | chr4:3464184-3463726 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 98, 12 |
| Conread position: | 47-218 |
| Cow position: | chr4:44622061-44621891 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 119, 131 |
| Conread position: | 47-480 |
| Cow position: | chr4:65944273-65944696 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 116, 10 |
| Conread position: | 47-486 |
| Cow position: | chr4:43465370-43465823 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 108 |
| Conread position: | 48-486 |
| Cow position: | chr4:44086359-44085927 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 6 |
| Conread position: | 48-488 |
| Cow position: | chr4:67568349-67567920 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 7 |
| Conread position: | 50-240 |
| Cow position: | chr4:13150739-13150549 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 116, 64 |
| Conread position: | 56-472 |
| Cow position: | chr4:66836139-66835701 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 219 |
| Conread position: | 56-480 |
| Cow position: | chr4:42981346-42980900 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 147 |
| Conread position: | 67-238 |
| Cow position: | chr4:41123007-41123181 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 67-480 |
| Cow position: | chr4:60093709-60094108 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 171, 115 |
| Conread position: | 180-484 |
| Cow position: | chr4:63393900-63394209 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 21 |
| Conread position: | 180-484 |
| Cow position: | chr4:63398493-63398806 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 231 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 228-488 |
| Cow position: | chr4:3868826-3868550 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 91, 26 |
| Conread position: | 229-480 |
| Cow position: | chr4:42485570-42485306 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 119, 10 |
| Conread position: | 246-344 |
| Cow position: | chr4:36494199-36494297 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 249-486 |
| Cow position: | chr4:44621885-44621631 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 257-415 |
| Cow position: | chr4:12702085-12701918 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 81, 133 |
| Conread position: | 257-475 |
| Cow position: | chr4:13150553-13150318 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 257-486 |
| Cow position: | chr4:57717058-57717298 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 147 |
| Conread position: | 258-491 |
| Cow position: | chr4:32024596-32024844 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 87, 65 |
| Conread position: | 293-486 |
| Cow position: | chr4:28224014-28223804 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.