Cow genome map
| Conread name: | Pig1-129C12 |
| Conread position: | 24-486 |
| Cow position: | chr9:5701842-5701383 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 305 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 138, 23 |
| Conread position: | 37-224 |
| Cow position: | chr9:36602825-36602637 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 126, 17 |
| Conread position: | 37-240 |
| Cow position: | chr9:54359207-54359003 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 37-245 |
| Cow position: | chr9:17988685-17988891 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 125, 20 |
| Conread position: | 37-486 |
| Cow position: | chr9:1387507-1387973 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 37-486 |
| Cow position: | chr9:12637907-12638365 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 170 |
| Conread position: | 37-504 |
| Cow position: | chr9:8321527-8321050 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 325 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 38-234 |
| Cow position: | chr9:15992975-15993175 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 114, 166 |
| Conread position: | 38-237 |
| Cow position: | chr9:61128059-61127858 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 125, 142 |
| Conread position: | 38-468 |
| Cow position: | chr9:58569781-58569352 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 55, 66 |
| Conread position: | 38-486 |
| Cow position: | chr9:1097281-1097727 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 144, 191 |
| Conread position: | 38-486 |
| Cow position: | chr9:4968709-4968274 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 310 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 136, 19 |
| Conread position: | 38-486 |
| Cow position: | chr9:27385415-27385885 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 16 |
| Conread position: | 39-476 |
| Cow position: | chr9:41026651-41027092 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 124, 15 |
| Conread position: | 41-480 |
| Cow position: | chr9:25541188-25541639 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 14 |
| Conread position: | 43-435 |
| Cow position: | chr9:5479173-5479596 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 52 |
| Conread position: | 44-480 |
| Cow position: | chr9:16619404-16618957 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 16 |
| Conread position: | 46-237 |
| Cow position: | chr9:41843074-41843266 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 117, 136 |
| Conread position: | 47-199 |
| Cow position: | chr9:37289203-37289357 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 115, 52 |
| Conread position: | 47-252 |
| Cow position: | chr9:7615634-7615841 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 92, 10 |
| Conread position: | 47-480 |
| Cow position: | chr9:42252373-42252808 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 293 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 117, 29 |
| Conread position: | 47-486 |
| Cow position: | chr9:8627632-8627195 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 116, 157 |
| Conread position: | 56-406 |
| Cow position: | chr9:23133775-23133430 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 57-465 |
| Cow position: | chr9:40441167-40440742 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 147 |
| Conread position: | 60-486 |
| Cow position: | chr9:16864040-16863598 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 144 |
| Conread position: | 63-454 |
| Cow position: | chr9:22441362-22440981 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 116, 174 |
| Conread position: | 64-486 |
| Cow position: | chr9:5380722-5381151 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 139 |
| Conread position: | 70-487 |
| Cow position: | chr9:20605717-20605315 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 113 |
| Conread position: | 71-486 |
| Cow position: | chr9:6260087-6260530 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 10, 133 |
| Conread position: | 77-486 |
| Cow position: | chr9:44114905-44114495 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 150, 103 |
| Conread position: | 133-364 |
| Cow position: | chr9:8082891-8083130 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 163-364 |
| Cow position: | chr9:48193547-48193753 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 205-470 |
| Cow position: | chr9:1631275-1630997 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 52 |
| Conread position: | 242-476 |
| Cow position: | chr9:34047682-34047937 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 244 |
| Conread position: | 243-486 |
| Cow position: | chr9:37289674-37289941 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 248-441 |
| Cow position: | chr9:17988873-17989063 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 174, 104 |
| Conread position: | 257-486 |
| Cow position: | chr9:1383518-1383274 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 89, 0 |
Show alignments to all cow chromosomes.