Cow genome map
| Conread name: | Pig1-129C12 |
| Conread position: | 32-477 |
| Cow position: | chrX:45892768-45893214 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 314 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 130, 64 |
| Conread position: | 37-237 |
| Cow position: | chrX:39983218-39983420 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 37-479 |
| Cow position: | chrX:25306951-25306516 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 113, 21 |
| Conread position: | 37-486 |
| Cow position: | chrX:42496659-42497096 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 320 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 38-234 |
| Cow position: | chrX:38630882-38630685 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 136, 12 |
| Conread position: | 38-237 |
| Cow position: | chrX:26381766-26381564 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 125, 12 |
| Conread position: | 38-238 |
| Cow position: | chrX:47943485-47943684 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 74, 172 |
| Conread position: | 38-240 |
| Cow position: | chrX:48664823-48665030 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 161 |
| Conread position: | 38-486 |
| Cow position: | chrX:28641411-28641867 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 216 |
| Conread position: | 38-486 |
| Cow position: | chrX:32979126-32978672 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 303 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 128, 120 |
| Conread position: | 38-486 |
| Cow position: | chrX:47331964-47331478 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 19, 187 |
| Conread position: | 42-221 |
| Cow position: | chrX:47336574-47336392 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 117, 13 |
| Conread position: | 46-237 |
| Cow position: | chrX:29145127-29144934 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 97, 137 |
| Conread position: | 47-479 |
| Cow position: | chrX:36090214-36090667 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 10 |
| Conread position: | 56-234 |
| Cow position: | chrX:5414305-5414483 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 126, 24 |
| Conread position: | 68-489 |
| Cow position: | chrX:45769911-45769476 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 309 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 75-486 |
| Cow position: | chrX:48016277-48015845 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 132 |
| Conread position: | 249-476 |
| Cow position: | chrX:34827258-34827497 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 83, 225 |
| Conread position: | 257-473 |
| Cow position: | chrX:37075031-37074804 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 257-474 |
| Cow position: | chrX:28036831-28037053 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 82, 140 |
| Conread position: | 260-476 |
| Cow position: | chrX:39861018-39861246 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 86, 53 |
| Conread position: | 263-390 |
| Cow position: | chrX:6393161-6393024 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 272-492 |
| Cow position: | chrX:42570665-42570434 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 55, 126 |
| Conread position: | 276-453 |
| Cow position: | chrX:42467445-42467250 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.