Cow genome map
| Conread name: | Pig1-131E01 |
| Conread position: | 179-525 |
| Cow position: | chr12:21428198-21427851 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 285-519 |
| Cow position: | chr12:24994464-24994227 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-520 |
| Cow position: | chr12:21092228-21091990 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 39, 162 |
| Conread position: | 285-520 |
| Cow position: | chr12:42606752-42606514 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-520 |
| Cow position: | chr12:43913337-43913575 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 285-521 |
| Cow position: | chr12:1404000-1404235 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 189, 42 |
| Conread position: | 285-525 |
| Cow position: | chr12:6405137-6404897 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 285-525 |
| Cow position: | chr12:8676591-8676348 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 39, 53 |
| Conread position: | 285-525 |
| Cow position: | chr12:11099725-11099976 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr12:14660851-14660608 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr12:20461731-20461488 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr12:23140676-23140429 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 285-525 |
| Cow position: | chr12:25262014-25261778 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 58, 144 |
| Conread position: | 285-525 |
| Cow position: | chr12:27854466-27854223 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr12:37560512-37560755 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 286-525 |
| Cow position: | chr12:15950307-15950066 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 199 |
| Conread position: | 289-518 |
| Cow position: | chr12:21253083-21252851 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 43, 35 |
| Conread position: | 289-525 |
| Cow position: | chr12:3362438-3362676 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 99 |
| Conread position: | 289-526 |
| Cow position: | chr12:33042863-33043095 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 35, 194 |
| Conread position: | 293-525 |
| Cow position: | chr12:25098969-25098734 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 7, 193 |
| Conread position: | 294-520 |
| Cow position: | chr12:21210172-21210400 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 33, 181 |
| Conread position: | 294-524 |
| Cow position: | chr12:3209482-3209711 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 294-525 |
| Cow position: | chr12:21429516-21429750 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 295-524 |
| Cow position: | chr12:42858026-42857794 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 13, 191 |
| Conread position: | 304-525 |
| Cow position: | chr12:5145190-5145398 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 323-527 |
| Cow position: | chr12:756723-756916 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 20, 62 |
| Conread position: | 358-525 |
| Cow position: | chr12:33120983-33121159 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 376-525 |
| Cow position: | chr12:20844470-20844618 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 386-525 |
| Cow position: | chr12:25267809-25267670 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.