Cow genome map
| Conread name: | Pig1-131E01 |
| Conread position: | 274-525 |
| Cow position: | chr15:51218866-51219119 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 275-525 |
| Cow position: | chr15:3260177-3259926 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 276-518 |
| Cow position: | chr15:9737782-9737538 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 284-525 |
| Cow position: | chr15:17077412-17077169 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 285-466 |
| Cow position: | chr15:7892195-7892011 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 148 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-521 |
| Cow position: | chr15:2926459-2926682 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 39, 92 |
| Conread position: | 285-524 |
| Cow position: | chr15:20411750-20411990 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:58808-59047 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 285-525 |
| Cow position: | chr15:107153-107396 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:1767987-1768223 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 39, 103 |
| Conread position: | 285-525 |
| Cow position: | chr15:1833486-1833244 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 108 |
| Conread position: | 285-525 |
| Cow position: | chr15:2588295-2588052 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:2646497-2646258 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 39 |
| Conread position: | 285-525 |
| Cow position: | chr15:2901109-2900865 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:4197619-4197862 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:4386909-4387152 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:4726354-4726597 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:4766343-4766588 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:6561739-6561982 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:6590964-6590720 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 95 |
| Conread position: | 285-525 |
| Cow position: | chr15:6613874-6614116 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 285-525 |
| Cow position: | chr15:7564149-7564393 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:7929725-7929964 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 125 |
| Conread position: | 285-525 |
| Cow position: | chr15:13390169-13389929 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 285-525 |
| Cow position: | chr15:14581211-14580964 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:15345956-15345713 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:24296243-24296482 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 42, 83 |
| Conread position: | 285-525 |
| Cow position: | chr15:24794973-24795213 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 37 |
| Conread position: | 285-525 |
| Cow position: | chr15:25205854-25205611 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 285-525 |
| Cow position: | chr15:25653914-25653665 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 162 |
| Conread position: | 285-525 |
| Cow position: | chr15:31360016-31360259 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:32492731-32492488 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:33122530-33122773 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:35752153-35751910 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:35898624-35898381 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr15:38981818-38982058 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 285-525 |
| Cow position: | chr15:41659320-41659563 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-526 |
| Cow position: | chr15:17294207-17294445 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 39, 100 |
| Conread position: | 285-527 |
| Cow position: | chr15:2412303-2412062 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 42, 127 |
| Conread position: | 286-525 |
| Cow position: | chr15:53339376-53339618 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 286-526 |
| Cow position: | chr15:6279630-6279870 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 286-527 |
| Cow position: | chr15:5981512-5981755 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 287-525 |
| Cow position: | chr15:1765472-1765711 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 70 |
| Conread position: | 287-527 |
| Cow position: | chr15:4672588-4672830 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 88 |
| Conread position: | 287-527 |
| Cow position: | chr15:17149269-17149508 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 288-517 |
| Cow position: | chr15:31846599-31846832 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 53 |
| Conread position: | 288-524 |
| Cow position: | chr15:368492-368259 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 36 |
| Conread position: | 288-525 |
| Cow position: | chr15:4813738-4813985 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 12, 98 |
| Conread position: | 288-525 |
| Cow position: | chr15:5010476-5010237 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 288-525 |
| Cow position: | chr15:6154771-6154532 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 218 |
| Conread position: | 289-525 |
| Cow position: | chr15:8698774-8698539 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 289-525 |
| Cow position: | chr15:20355437-20355203 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 132 |
| Conread position: | 294-511 |
| Cow position: | chr15:32712398-32712618 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 294-525 |
| Cow position: | chr15:9003062-9002827 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 295-525 |
| Cow position: | chr15:2077811-2078044 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 295-525 |
| Cow position: | chr15:4923308-4923540 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 295-525 |
| Cow position: | chr15:7838431-7838664 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 295-525 |
| Cow position: | chr15:17036495-17036262 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 32, 59 |
| Conread position: | 296-475 |
| Cow position: | chr15:51675878-51676066 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 180 |
| Conread position: | 296-511 |
| Cow position: | chr15:17216985-17216772 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 296-526 |
| Cow position: | chr15:8100624-8100847 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 31, 141 |
| Conread position: | 297-520 |
| Cow position: | chr15:1299383-1299140 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 299-519 |
| Cow position: | chr15:4927535-4927770 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 299-525 |
| Cow position: | chr15:7546038-7546268 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 299-525 |
| Cow position: | chr15:51613305-51613532 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 306-521 |
| Cow position: | chr15:4962793-4963004 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 321-525 |
| Cow position: | chr15:32695355-32695554 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 324-524 |
| Cow position: | chr15:6329247-6329435 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 138 |
| Conread position: | 328-525 |
| Cow position: | chr15:1783529-1783726 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 15, 5 |
| Conread position: | 328-525 |
| Cow position: | chr15:8811107-8810922 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 111 |
| Conread position: | 331-525 |
| Cow position: | chr15:4081035-4080840 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 332-526 |
| Cow position: | chr15:31859755-31859560 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 333-527 |
| Cow position: | chr15:29970112-29969924 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 131, 24 |
| Conread position: | 337-517 |
| Cow position: | chr15:19395752-19395565 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 361-525 |
| Cow position: | chr15:9431169-9431332 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 119, 82 |
Show alignments to all cow chromosomes.