Cow genome map
| Conread name: | Pig1-131E01 |
| Conread position: | 276-524 |
| Cow position: | chr16:54324533-54324277 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 283-521 |
| Cow position: | chr16:25258611-25258851 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 284-525 |
| Cow position: | chr16:10439066-10439311 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 285-520 |
| Cow position: | chr16:1861045-1861283 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 104 |
| Conread position: | 285-520 |
| Cow position: | chr16:41572199-41572447 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-524 |
| Cow position: | chr16:25086422-25086663 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 140 |
| Conread position: | 285-524 |
| Cow position: | chr16:25342781-25343023 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 102 |
| Conread position: | 285-524 |
| Cow position: | chr16:27732572-27732330 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr16:33338-33584 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 62, 43 |
| Conread position: | 285-525 |
| Cow position: | chr16:1432997-1433237 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 42, 170 |
| Conread position: | 285-525 |
| Cow position: | chr16:2237956-2237718 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 46 |
| Conread position: | 285-525 |
| Cow position: | chr16:2482325-2482094 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 285-525 |
| Cow position: | chr16:2726403-2726162 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 285-525 |
| Cow position: | chr16:3088394-3088151 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr16:5119209-5118966 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr16:5527575-5527333 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 285-525 |
| Cow position: | chr16:5662649-5662892 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr16:8815295-8815055 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 87 |
| Conread position: | 285-525 |
| Cow position: | chr16:15568067-15568310 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr16:23535091-23534848 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr16:23984110-23984355 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 42, 113 |
| Conread position: | 285-525 |
| Cow position: | chr16:25442439-25442682 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr16:25456671-25456428 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr16:28196431-28196188 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 285-525 |
| Cow position: | chr16:28470260-28470009 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr16:29047832-29048075 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr16:37480045-37479803 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 285-525 |
| Cow position: | chr16:40295351-40295114 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 58, 117 |
| Conread position: | 285-525 |
| Cow position: | chr16:41753800-41753560 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 162 |
| Conread position: | 285-525 |
| Cow position: | chr16:43896452-43896209 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr16:51084967-51085210 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 285-527 |
| Cow position: | chr16:12537138-12536897 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 123 |
| Conread position: | 286-469 |
| Cow position: | chr16:9931544-9931729 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 43, 139 |
| Conread position: | 286-521 |
| Cow position: | chr16:51403064-51402827 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 38, 92 |
| Conread position: | 287-525 |
| Cow position: | chr16:3330744-3330982 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 287-525 |
| Cow position: | chr16:16240477-16240241 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 46, 62 |
| Conread position: | 288-525 |
| Cow position: | chr16:5485539-5485776 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 288-525 |
| Cow position: | chr16:15185892-15186131 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 189 |
| Conread position: | 289-524 |
| Cow position: | chr16:20202786-20203027 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 289-525 |
| Cow position: | chr16:1959808-1959573 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 35, 197 |
| Conread position: | 289-525 |
| Cow position: | chr16:23809169-23809403 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 290-526 |
| Cow position: | chr16:27712367-27712132 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 291-520 |
| Cow position: | chr16:25934002-25934234 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 291-521 |
| Cow position: | chr16:16229133-16229356 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 33, 62 |
| Conread position: | 291-525 |
| Cow position: | chr16:34531105-34531340 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 294-525 |
| Cow position: | chr16:19778833-19778599 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 295-525 |
| Cow position: | chr16:14664994-14664760 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 295-526 |
| Cow position: | chr16:40557125-40556881 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 296-519 |
| Cow position: | chr16:46501024-46501247 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 70 |
| Conread position: | 296-521 |
| Cow position: | chr16:1566633-1566415 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 31, 64 |
| Conread position: | 304-527 |
| Cow position: | chr16:18618296-18618074 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 311-525 |
| Cow position: | chr16:20193336-20193119 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 328-525 |
| Cow position: | chr16:7465459-7465657 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 328-525 |
| Cow position: | chr16:23251115-23250928 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 15, 136 |
| Conread position: | 330-525 |
| Cow position: | chr16:3526169-3525968 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 17, 149 |
| Conread position: | 332-527 |
| Cow position: | chr16:3828481-3828286 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 85 |
| Conread position: | 333-525 |
| Cow position: | chr16:4474746-4474549 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 367-525 |
| Cow position: | chr16:26664620-26664779 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 115, 0 |
Show alignments to all cow chromosomes.