Cow genome map

Conread name: Pig1-131E01

Conread position: 30-249
Cow position: chr2:34998275-34998508 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 215

Conread position: 283-525
Cow position: chr2:11158083-11157838 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 283-525
Cow position: chr2:72187455-72187216 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 41, 12

Conread position: 284-525
Cow position: chr2:36051999-36051743 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 285-510
Cow position: chr2:52617516-52617743 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 42, 149

Conread position: 285-521
Cow position: chr2:6880409-6880637 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 146

Conread position: 285-521
Cow position: chr2:47602225-47601985 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 285-524
Cow position: chr2:34052198-34052444 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 150

Conread position: 285-525
Cow position: chr2:174527-174284 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 42, 176

Conread position: 285-525
Cow position: chr2:364027-363785 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 27

Conread position: 285-525
Cow position: chr2:780368-780124 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 0

Conread position: 285-525
Cow position: chr2:2087129-2086886 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr2:4402110-4401868 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 135

Conread position: 285-525
Cow position: chr2:8119584-8119825 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 58, 114

Conread position: 285-525
Cow position: chr2:9908954-9909206 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr2:10185188-10184943 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr2:10610605-10610362 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr2:11558889-11559132 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr2:12223238-12222995 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr2:12479226-12478978 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr2:16901295-16901538 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr2:18242864-18242623 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 136

Conread position: 285-525
Cow position: chr2:19012404-19012638 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 42, 62

Conread position: 285-525
Cow position: chr2:24925608-24925848 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 109

Conread position: 285-525
Cow position: chr2:24926457-24926697 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 109

Conread position: 285-525
Cow position: chr2:25887509-25887266 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr2:26904715-26904490 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 219, 39

Conread position: 285-525
Cow position: chr2:28648570-28648326 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 0

Conread position: 285-525
Cow position: chr2:32434285-32434047 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 39, 180

Conread position: 285-525
Cow position: chr2:32639984-32640227 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr2:36981429-36981672 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr2:39422665-39422906 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 42

Conread position: 285-525
Cow position: chr2:45938661-45938419 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 190

Conread position: 285-525
Cow position: chr2:52063800-52064042 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr2:53540975-53541217 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 39

Conread position: 285-525
Cow position: chr2:54738528-54738769 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 164

Conread position: 285-525
Cow position: chr2:55483116-55482878 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 42, 130

Conread position: 285-525
Cow position: chr2:56888777-56889020 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr2:72688647-72688890 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 285-525
Cow position: chr2:78743601-78743837 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 160

Conread position: 285-525
Cow position: chr2:81258217-81258459 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 200

Conread position: 285-527
Cow position: chr2:32064999-32064753 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-527
Cow position: chr2:43446007-43446245 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 44

Conread position: 286-523
Cow position: chr2:72681095-72680856 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 41, 194

Conread position: 286-525
Cow position: chr2:33082925-33082683 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 7

Conread position: 286-525
Cow position: chr2:78763714-78763935 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 287-518
Cow position: chr2:48815322-48815550 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 73

Conread position: 287-525
Cow position: chr2:50982106-50981865 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 288-519
Cow position: chr2:22078946-22079183 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 288-520
Cow position: chr2:44933946-44933714 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 152

Conread position: 288-525
Cow position: chr2:281641-281403 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 100

Conread position: 288-525
Cow position: chr2:14824089-14824318 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 72

Conread position: 288-525
Cow position: chr2:24471588-24471355 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 104

Conread position: 288-525
Cow position: chr2:25028260-25028023 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 41

Conread position: 288-525
Cow position: chr2:28794281-28794528 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 0

Conread position: 288-525
Cow position: chr2:42361225-42360987 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 102

Conread position: 288-525
Cow position: chr2:42669666-42669419 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 39, 158

Conread position: 288-525
Cow position: chr2:54693986-54694220 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 93

Conread position: 288-525
Cow position: chr2:80291720-80291480 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 52, 0

Conread position: 288-526
Cow position: chr2:15575808-15575563 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 288-527
Cow position: chr2:28639805-28639558 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 59

Conread position: 289-516
Cow position: chr2:34563619-34563399 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 94

Conread position: 289-520
Cow position: chr2:62729555-62729788 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 289-524
Cow position: chr2:34594924-34594690 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 176, 23

Conread position: 289-525
Cow position: chr2:9188990-9188763 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 38, 142

Conread position: 289-525
Cow position: chr2:16074496-16074257 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 161

Conread position: 289-525
Cow position: chr2:32656685-32656917 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 22

Conread position: 291-525
Cow position: chr2:12696423-12696186 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 293-461
Cow position: chr2:2411736-2411568 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 50, 35

Conread position: 294-525
Cow position: chr2:41047981-41047745 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 294-527
Cow position: chr2:35357052-35357272 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 66

Conread position: 295-525
Cow position: chr2:41181163-41181396 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 295-525
Cow position: chr2:47811901-47812133 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 296-525
Cow position: chr2:10264359-10264131 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 98

Conread position: 296-525
Cow position: chr2:11730814-11731034 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 117

Conread position: 296-525
Cow position: chr2:13044657-13044425 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 311-519
Cow position: chr2:314824-314614 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 164

Conread position: 312-525
Cow position: chr2:5869066-5868851 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 78

Conread position: 314-525
Cow position: chr2:210971-210757 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 15

Conread position: 332-525
Cow position: chr2:975597-975398 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 332-525
Cow position: chr2:53005158-53004964 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 342-527
Cow position: chr2:41155014-41155206 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 86, 67

Conread position: 362-525
Cow position: chr2:67188728-67188889 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 372-525
Cow position: chr2:44989716-44989563 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 375-525
Cow position: chr2:46049104-46048954 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 402-525
Cow position: chr2:62727930-62728053 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 405-525
Cow position: chr2:10466750-10466870 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.