Cow genome map
Conread name: | Pig1-131E01 |
Conread position: | 283-507 |
Cow position: | chr21:2880157-2879931 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 172 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 44, 129 |
Conread position: | 283-525 |
Cow position: | chr21:18816586-18816346 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 170 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 41, 151 |
Conread position: | 285-519 |
Cow position: | chr21:26635487-26635250 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-520 |
Cow position: | chr21:2512520-2512757 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 31 |
Conread position: | 285-522 |
Cow position: | chr21:20742968-20742730 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 171 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 42, 28 |
Conread position: | 285-524 |
Cow position: | chr21:4588335-4588103 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 28 |
Conread position: | 285-525 |
Cow position: | chr21:2417879-2418117 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 57 |
Conread position: | 285-525 |
Cow position: | chr21:5018810-5019055 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr21:6414354-6414111 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr21:10568369-10568611 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 183 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 42, 116 |
Conread position: | 285-525 |
Cow position: | chr21:19612430-19612673 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr21:25125280-25125519 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 164 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 48, 82 |
Conread position: | 285-525 |
Cow position: | chr21:26849355-26849118 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 176 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 35, 40 |
Conread position: | 285-525 |
Cow position: | chr21:27285130-27285367 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 180 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 30, 90 |
Conread position: | 285-525 |
Cow position: | chr21:33253853-33254094 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 178 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 285-525 |
Cow position: | chr21:33710819-33711062 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr21:38802107-38802350 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 39 |
Conread position: | 285-525 |
Cow position: | chr21:39426742-39426977 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 182 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 48, 39 |
Conread position: | 285-525 |
Cow position: | chr21:47647001-47647245 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-527 |
Cow position: | chr21:2539409-2539164 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 191 |
Conread position: | 285-527 |
Cow position: | chr21:6626199-6626447 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 174 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 285-527 |
Cow position: | chr21:7591328-7591571 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 180 |
Conread position: | 285-527 |
Cow position: | chr21:40270002-40269757 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 285-527 |
Cow position: | chr21:44764282-44764039 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 42 |
Conread position: | 286-521 |
Cow position: | chr21:13298264-13298500 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 135 |
Conread position: | 286-527 |
Cow position: | chr21:21916911-21917145 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 178 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 287-524 |
Cow position: | chr21:997175-996925 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 183 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 287-525 |
Cow position: | chr21:2712583-2712809 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 180 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 48, 34 |
Conread position: | 288-525 |
Cow position: | chr21:30712-30941 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 178 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 36, 143 |
Conread position: | 288-525 |
Cow position: | chr21:28257095-28257334 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 169 |
Conread position: | 288-527 |
Cow position: | chr21:26836863-26837105 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 289-525 |
Cow position: | chr21:30563344-30563577 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 174 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 38, 131 |
Conread position: | 289-527 |
Cow position: | chr21:1688495-1688255 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 174 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 38, 186 |
Conread position: | 289-527 |
Cow position: | chr21:9893647-9893882 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 35 |
Conread position: | 290-525 |
Cow position: | chr21:26649032-26648801 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 25 |
Conread position: | 290-525 |
Cow position: | chr21:37372901-37373139 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 294-503 |
Cow position: | chr21:21701589-21701803 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 153 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 294-525 |
Cow position: | chr21:38023811-38024042 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 159 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 19, 35 |
Conread position: | 294-527 |
Cow position: | chr21:34655507-34655745 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 295-525 |
Cow position: | chr21:3780454-3780687 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 177 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 32, 12 |
Conread position: | 295-525 |
Cow position: | chr21:27069284-27069051 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 295-525 |
Cow position: | chr21:30597790-30597557 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 139 |
Conread position: | 302-525 |
Cow position: | chr21:31250682-31250906 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 172 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 49, 133 |
Conread position: | 333-525 |
Cow position: | chr21:1194167-1194349 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 144 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 10, 43 |
Conread position: | 358-525 |
Cow position: | chr21:26402011-26401845 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 128 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 374-520 |
Cow position: | chr21:37124579-37124432 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 111 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 37, 16 |
Show alignments to all cow chromosomes.