Cow genome map
| Conread name: | Pig1-131E01 |
| Conread position: | 209-520 |
| Cow position: | chr24:12108055-12107743 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 276-525 |
| Cow position: | chr24:22972640-22972892 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 158 |
| Conread position: | 283-526 |
| Cow position: | chr24:17410038-17410287 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 285-525 |
| Cow position: | chr24:147027-146782 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr24:4413962-4413728 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 42, 97 |
| Conread position: | 285-525 |
| Cow position: | chr24:6023503-6023260 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 37 |
| Conread position: | 285-525 |
| Cow position: | chr24:6337967-6338209 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 51 |
| Conread position: | 285-525 |
| Cow position: | chr24:9545639-9545883 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 157 |
| Conread position: | 285-525 |
| Cow position: | chr24:12127526-12127283 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr24:12149710-12149462 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 285-525 |
| Cow position: | chr24:12238870-12239117 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 39, 31 |
| Conread position: | 285-525 |
| Cow position: | chr24:13179435-13179194 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 285-525 |
| Cow position: | chr24:13189757-13189991 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 42, 62 |
| Conread position: | 285-525 |
| Cow position: | chr24:14383044-14382802 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 42, 180 |
| Conread position: | 285-525 |
| Cow position: | chr24:19834991-19835231 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 230 |
| Conread position: | 285-525 |
| Cow position: | chr24:20286328-20286085 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr24:29188871-29189113 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 217 |
| Conread position: | 285-525 |
| Cow position: | chr24:38585550-38585308 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 42, 190 |
| Conread position: | 285-527 |
| Cow position: | chr24:5776817-5776572 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 287-499 |
| Cow position: | chr24:12569606-12569819 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 288-525 |
| Cow position: | chr24:12087787-12088027 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 39, 101 |
| Conread position: | 288-527 |
| Cow position: | chr24:14755586-14755828 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 289-525 |
| Cow position: | chr24:7089413-7089174 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 290-525 |
| Cow position: | chr24:19703075-19703314 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 291-525 |
| Cow position: | chr24:6353728-6353962 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 99, 73 |
| Conread position: | 294-525 |
| Cow position: | chr24:6963157-6962923 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 295-510 |
| Cow position: | chr24:41004081-41004298 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 32, 119 |
| Conread position: | 296-525 |
| Cow position: | chr24:12334135-12333911 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 298-525 |
| Cow position: | chr24:6272992-6272764 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 300-525 |
| Cow position: | chr24:9090458-9090233 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 303-525 |
| Cow position: | chr24:19469006-19468781 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 303-525 |
| Cow position: | chr24:36557958-36557743 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 312-525 |
| Cow position: | chr24:40468781-40469000 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 313-525 |
| Cow position: | chr24:8150712-8150493 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 325-525 |
| Cow position: | chr24:23094398-23094196 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 328-517 |
| Cow position: | chr24:25438231-25438421 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 332-527 |
| Cow position: | chr24:17300271-17300083 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 339-525 |
| Cow position: | chr24:17313035-17312851 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 149, 95 |
| Conread position: | 373-525 |
| Cow position: | chr24:16082825-16082673 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 391-525 |
| Cow position: | chr24:23097070-23096936 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.