Cow genome map
Conread name: | Pig1-131E01 |
Conread position: | 22-249 |
Cow position: | chr3:18595977-18595732 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 170 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 50-249 |
Cow position: | chr3:18061079-18060879 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 140 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 10, 108 |
Conread position: | 284-525 |
Cow position: | chr3:47087706-47087944 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 87 |
Conread position: | 285-520 |
Cow position: | chr3:4736498-4736263 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 174 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 64, 42 |
Conread position: | 285-520 |
Cow position: | chr3:75184835-75185067 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 159 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 35, 24 |
Conread position: | 285-521 |
Cow position: | chr3:20382460-20382698 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 154 |
Conread position: | 285-521 |
Cow position: | chr3:58948953-58949190 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 184 |
Conread position: | 285-524 |
Cow position: | chr3:7478491-7478249 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 285-524 |
Cow position: | chr3:64015943-64015717 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 185 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 42, 8 |
Conread position: | 285-525 |
Cow position: | chr3:595559-595793 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 41 |
Conread position: | 285-525 |
Cow position: | chr3:1742755-1742998 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 39 |
Conread position: | 285-525 |
Cow position: | chr3:2709444-2709203 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 285-525 |
Cow position: | chr3:2870212-2870455 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:3524435-3524678 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:3840093-3839851 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 149 |
Conread position: | 285-525 |
Cow position: | chr3:4287513-4287753 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 43 |
Conread position: | 285-525 |
Cow position: | chr3:5952763-5952520 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:5993657-5993421 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 182 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 58, 42 |
Conread position: | 285-525 |
Cow position: | chr3:7157296-7157052 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 39 |
Conread position: | 285-525 |
Cow position: | chr3:15054296-15054038 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 285-525 |
Cow position: | chr3:16224308-16224552 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:18812922-18813167 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:19755538-19755297 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 85 |
Conread position: | 285-525 |
Cow position: | chr3:19799755-19799512 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:19880068-19880311 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:19945669-19945917 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 285-525 |
Cow position: | chr3:23206450-23206209 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 183 |
Conread position: | 285-525 |
Cow position: | chr3:23288910-23288667 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 185 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 42, 79 |
Conread position: | 285-525 |
Cow position: | chr3:29329866-29329623 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:29575700-29575457 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:31416440-31416683 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 44 |
Conread position: | 285-525 |
Cow position: | chr3:32621618-32621375 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 166 |
Conread position: | 285-525 |
Cow position: | chr3:34029497-34029253 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:34505929-34505686 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:36863034-36862791 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:40338724-40338481 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:44925486-44925730 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:45034163-45034406 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:49543787-49543545 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 177 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 285-525 |
Cow position: | chr3:51857267-51857024 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:56146727-56146971 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 285-525 |
Cow position: | chr3:56295609-56295852 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:56338849-56338604 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:57483302-57483059 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 285-525 |
Cow position: | chr3:64026711-64026471 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 84 |
Conread position: | 285-525 |
Cow position: | chr3:64652034-64652275 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 182 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 44, 27 |
Conread position: | 285-525 |
Cow position: | chr3:72631486-72631723 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 183 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 42, 86 |
Conread position: | 285-525 |
Cow position: | chr3:74058950-74059192 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 149 |
Conread position: | 285-525 |
Cow position: | chr3:77425024-77425258 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 174 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 39, 35 |
Conread position: | 285-526 |
Cow position: | chr3:48229091-48228848 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 149 |
Conread position: | 285-526 |
Cow position: | chr3:50916764-50917005 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 185 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 39, 109 |
Conread position: | 285-527 |
Cow position: | chr3:24444676-24444432 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 24 |
Conread position: | 285-527 |
Cow position: | chr3:53517033-53517278 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 287-509 |
Cow position: | chr3:77444831-77445054 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 168 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 40, 102 |
Conread position: | 287-525 |
Cow position: | chr3:24644639-24644880 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 173 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 40, 129 |
Conread position: | 288-500 |
Cow position: | chr3:42448542-42448757 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 159 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 39, 150 |
Conread position: | 288-524 |
Cow position: | chr3:49136139-49135899 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 288-525 |
Cow position: | chr3:7247961-7248199 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 131 |
Conread position: | 288-525 |
Cow position: | chr3:21181271-21181031 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 288-525 |
Cow position: | chr3:68698546-68698308 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 182 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 39, 155 |
Conread position: | 288-525 |
Cow position: | chr3:68872328-68872088 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 289-525 |
Cow position: | chr3:6687218-6687454 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 35 |
Conread position: | 289-525 |
Cow position: | chr3:46503978-46504216 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 177 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 38, 101 |
Conread position: | 289-525 |
Cow position: | chr3:63240815-63240577 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 9 |
Conread position: | 290-525 |
Cow position: | chr3:38494668-38494906 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 175 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 52, 25 |
Conread position: | 291-525 |
Cow position: | chr3:36877231-36876993 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 182 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 9, 24 |
Conread position: | 291-525 |
Cow position: | chr3:45975932-45976166 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 164 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 57, 11 |
Conread position: | 291-527 |
Cow position: | chr3:78025994-78025753 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 183 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 13, 209 |
Conread position: | 294-525 |
Cow position: | chr3:16076779-16077010 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 164 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 30, 193 |
Conread position: | 294-525 |
Cow position: | chr3:65208618-65208842 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 182 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 30, 135 |
Conread position: | 295-525 |
Cow position: | chr3:30315980-30316214 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 176 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 295-525 |
Cow position: | chr3:40824826-40825059 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 76 |
Conread position: | 295-525 |
Cow position: | chr3:48057927-48057694 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 175 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 32, 143 |
Conread position: | 295-525 |
Cow position: | chr3:66621630-66621862 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 177 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 32, 193 |
Conread position: | 295-525 |
Cow position: | chr3:69932400-69932167 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 296-520 |
Cow position: | chr3:24457742-24457519 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 164 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 15, 24 |
Conread position: | 302-525 |
Cow position: | chr3:19940371-19940596 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 117 |
Conread position: | 304-511 |
Cow position: | chr3:64356522-64356313 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 161 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 304-525 |
Cow position: | chr3:2509423-2509208 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 168 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 29, 20 |
Conread position: | 311-524 |
Cow position: | chr3:74851699-74851482 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 164 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 16, 136 |
Conread position: | 314-525 |
Cow position: | chr3:4029187-4029399 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 155 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 7, 19 |
Conread position: | 321-525 |
Cow position: | chr3:58784693-58784489 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 160 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 22, 7 |
Conread position: | 328-524 |
Cow position: | chr3:77578667-77578483 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 148 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 19, 56 |
Conread position: | 329-525 |
Cow position: | chr3:38868057-38868258 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 160 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 329-527 |
Cow position: | chr3:19720190-19719990 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 142 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 331-525 |
Cow position: | chr3:10242125-10242320 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 153 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 331-525 |
Cow position: | chr3:59863034-59863229 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 151 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 332-525 |
Cow position: | chr3:58127266-58127454 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 143 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.