Cow genome map

Conread name: Pig1-131E01

Conread position: 22-249
Cow position: chr3:18595977-18595732 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 50-249
Cow position: chr3:18061079-18060879 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 108

Conread position: 284-525
Cow position: chr3:47087706-47087944 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 87

Conread position: 285-520
Cow position: chr3:4736498-4736263 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 42

Conread position: 285-520
Cow position: chr3:75184835-75185067 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 24

Conread position: 285-521
Cow position: chr3:20382460-20382698 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 154

Conread position: 285-521
Cow position: chr3:58948953-58949190 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 184

Conread position: 285-524
Cow position: chr3:7478491-7478249 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 285-524
Cow position: chr3:64015943-64015717 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 8

Conread position: 285-525
Cow position: chr3:595559-595793 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 41

Conread position: 285-525
Cow position: chr3:1742755-1742998 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 39

Conread position: 285-525
Cow position: chr3:2709444-2709203 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 285-525
Cow position: chr3:2870212-2870455 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:3524435-3524678 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:3840093-3839851 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 149

Conread position: 285-525
Cow position: chr3:4287513-4287753 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 43

Conread position: 285-525
Cow position: chr3:5952763-5952520 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:5993657-5993421 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 58, 42

Conread position: 285-525
Cow position: chr3:7157296-7157052 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 39

Conread position: 285-525
Cow position: chr3:15054296-15054038 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 285-525
Cow position: chr3:16224308-16224552 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:18812922-18813167 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:19755538-19755297 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 85

Conread position: 285-525
Cow position: chr3:19799755-19799512 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:19880068-19880311 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:19945669-19945917 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 285-525
Cow position: chr3:23206450-23206209 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 183

Conread position: 285-525
Cow position: chr3:23288910-23288667 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 42, 79

Conread position: 285-525
Cow position: chr3:29329866-29329623 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:29575700-29575457 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:31416440-31416683 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 44

Conread position: 285-525
Cow position: chr3:32621618-32621375 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 166

Conread position: 285-525
Cow position: chr3:34029497-34029253 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:34505929-34505686 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:36863034-36862791 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:40338724-40338481 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:44925486-44925730 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:45034163-45034406 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:49543787-49543545 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 48, 0

Conread position: 285-525
Cow position: chr3:51857267-51857024 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:56146727-56146971 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 285-525
Cow position: chr3:56295609-56295852 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:56338849-56338604 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:57483302-57483059 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr3:64026711-64026471 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 84

Conread position: 285-525
Cow position: chr3:64652034-64652275 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 27

Conread position: 285-525
Cow position: chr3:72631486-72631723 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 42, 86

Conread position: 285-525
Cow position: chr3:74058950-74059192 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 149

Conread position: 285-525
Cow position: chr3:77425024-77425258 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 39, 35

Conread position: 285-526
Cow position: chr3:48229091-48228848 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 149

Conread position: 285-526
Cow position: chr3:50916764-50917005 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 39, 109

Conread position: 285-527
Cow position: chr3:24444676-24444432 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 285-527
Cow position: chr3:53517033-53517278 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 287-509
Cow position: chr3:77444831-77445054 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 102

Conread position: 287-525
Cow position: chr3:24644639-24644880 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 129

Conread position: 288-500
Cow position: chr3:42448542-42448757 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 150

Conread position: 288-524
Cow position: chr3:49136139-49135899 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 288-525
Cow position: chr3:7247961-7248199 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 131

Conread position: 288-525
Cow position: chr3:21181271-21181031 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 288-525
Cow position: chr3:68698546-68698308 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 39, 155

Conread position: 288-525
Cow position: chr3:68872328-68872088 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 289-525
Cow position: chr3:6687218-6687454 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 35

Conread position: 289-525
Cow position: chr3:46503978-46504216 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 101

Conread position: 289-525
Cow position: chr3:63240815-63240577 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 9

Conread position: 290-525
Cow position: chr3:38494668-38494906 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 25

Conread position: 291-525
Cow position: chr3:36877231-36876993 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 9, 24

Conread position: 291-525
Cow position: chr3:45975932-45976166 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 11

Conread position: 291-527
Cow position: chr3:78025994-78025753 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 13, 209

Conread position: 294-525
Cow position: chr3:16076779-16077010 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 30, 193

Conread position: 294-525
Cow position: chr3:65208618-65208842 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 30, 135

Conread position: 295-525
Cow position: chr3:30315980-30316214 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 295-525
Cow position: chr3:40824826-40825059 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 76

Conread position: 295-525
Cow position: chr3:48057927-48057694 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 32, 143

Conread position: 295-525
Cow position: chr3:66621630-66621862 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 32, 193

Conread position: 295-525
Cow position: chr3:69932400-69932167 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 296-520
Cow position: chr3:24457742-24457519 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 24

Conread position: 302-525
Cow position: chr3:19940371-19940596 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 117

Conread position: 304-511
Cow position: chr3:64356522-64356313 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 304-525
Cow position: chr3:2509423-2509208 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 20

Conread position: 311-524
Cow position: chr3:74851699-74851482 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 136

Conread position: 314-525
Cow position: chr3:4029187-4029399 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 19

Conread position: 321-525
Cow position: chr3:58784693-58784489 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 22, 7

Conread position: 328-524
Cow position: chr3:77578667-77578483 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 56

Conread position: 329-525
Cow position: chr3:38868057-38868258 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 14, 0

Conread position: 329-527
Cow position: chr3:19720190-19719990 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 331-525
Cow position: chr3:10242125-10242320 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 12, 0

Conread position: 331-525
Cow position: chr3:59863034-59863229 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 12, 0

Conread position: 332-525
Cow position: chr3:58127266-58127454 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.