Cow genome map
| Conread name: | Pig1-131E01 |
| Conread position: | 283-525 |
| Cow position: | chr4:67682422-67682668 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 284-525 |
| Cow position: | chr4:530643-530888 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 285-495 |
| Cow position: | chr4:12588555-12588767 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 42, 123 |
| Conread position: | 285-502 |
| Cow position: | chr4:46200504-46200284 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 48 |
| Conread position: | 285-517 |
| Cow position: | chr4:10882775-10883011 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 285-520 |
| Cow position: | chr4:28653265-28653030 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 285-520 |
| Cow position: | chr4:65665167-65664947 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 285-521 |
| Cow position: | chr4:36897603-36897839 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 44, 106 |
| Conread position: | 285-525 |
| Cow position: | chr4:98990-98743 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 42, 154 |
| Conread position: | 285-525 |
| Cow position: | chr4:160384-160627 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr4:357132-357375 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr4:827435-827678 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr4:1049036-1048794 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 113 |
| Conread position: | 285-525 |
| Cow position: | chr4:5443598-5443355 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 108 |
| Conread position: | 285-525 |
| Cow position: | chr4:5881383-5881625 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 285-525 |
| Cow position: | chr4:6489139-6488898 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 183 |
| Conread position: | 285-525 |
| Cow position: | chr4:6865280-6865038 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 285-525 |
| Cow position: | chr4:9355606-9355849 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 285-525 |
| Cow position: | chr4:13494553-13494802 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 285-525 |
| Cow position: | chr4:14387048-14387292 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr4:17092635-17092394 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 116 |
| Conread position: | 285-525 |
| Cow position: | chr4:17244333-17244576 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr4:18338081-18338324 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr4:20236171-20235927 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 285-525 |
| Cow position: | chr4:21359453-21359702 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 189 |
| Conread position: | 285-525 |
| Cow position: | chr4:25598258-25598016 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 176 |
| Conread position: | 285-525 |
| Cow position: | chr4:26876556-26876318 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 285-525 |
| Cow position: | chr4:30472440-30472683 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 285-525 |
| Cow position: | chr4:32213399-32213642 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 39 |
| Conread position: | 285-525 |
| Cow position: | chr4:33022411-33022169 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 42, 190 |
| Conread position: | 285-525 |
| Cow position: | chr4:33071607-33071369 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 69 |
| Conread position: | 285-525 |
| Cow position: | chr4:33494782-33495025 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr4:41955990-41956233 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr4:41960127-41960369 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 108 |
| Conread position: | 285-525 |
| Cow position: | chr4:43318409-43318166 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 285-525 |
| Cow position: | chr4:44726805-44727048 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 153 |
| Conread position: | 285-525 |
| Cow position: | chr4:44779992-44779751 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 97 |
| Conread position: | 285-525 |
| Cow position: | chr4:57985219-57985461 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 111 |
| Conread position: | 285-526 |
| Cow position: | chr4:34178020-34177785 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 42, 116 |
| Conread position: | 285-527 |
| Cow position: | chr4:43882332-43882574 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 230 |
| Conread position: | 285-527 |
| Cow position: | chr4:48028088-48028330 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 42, 132 |
| Conread position: | 287-520 |
| Cow position: | chr4:19094206-19094442 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 27, 110 |
| Conread position: | 288-525 |
| Cow position: | chr4:16639840-16640080 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 288-525 |
| Cow position: | chr4:33596753-33596989 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 288-527 |
| Cow position: | chr4:60262932-60262699 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 289-525 |
| Cow position: | chr4:1929411-1929172 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 291-525 |
| Cow position: | chr4:41191399-41191162 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 5, 11 |
| Conread position: | 291-525 |
| Cow position: | chr4:44742019-44741795 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 294-525 |
| Cow position: | chr4:6267955-6267721 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 294-525 |
| Cow position: | chr4:6567615-6567849 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 294-527 |
| Cow position: | chr4:28149653-28149885 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 296-525 |
| Cow position: | chr4:65916504-65916732 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 89 |
| Conread position: | 298-525 |
| Cow position: | chr4:14139615-14139841 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 298-525 |
| Cow position: | chr4:20241759-20241990 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 300-525 |
| Cow position: | chr4:2089599-2089824 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 25 |
| Conread position: | 307-521 |
| Cow position: | chr4:60649694-60649914 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 312-525 |
| Cow position: | chr4:8702803-8703023 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 313-480 |
| Cow position: | chr4:46666176-46666346 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 313-525 |
| Cow position: | chr4:42405871-42406085 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 327-486 |
| Cow position: | chr4:67381952-67382108 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 328-525 |
| Cow position: | chr4:43867466-43867664 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 328-527 |
| Cow position: | chr4:68837726-68837525 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 333-527 |
| Cow position: | chr4:67797627-67797435 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 10, 61 |
| Conread position: | 334-525 |
| Cow position: | chr4:34183394-34183208 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 359-525 |
| Cow position: | chr4:43898238-43898068 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 391-525 |
| Cow position: | chr4:65222424-65222290 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.