Cow genome map

Conread name: Pig1-131E01

Conread position: 276-525
Cow position: chr6:64717779-64718032 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 9

Conread position: 284-520
Cow position: chr6:57471134-57471373 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 284-525
Cow position: chr6:6185709-6185953 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 40

Conread position: 285-514
Cow position: chr6:238379-238145 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 285-515
Cow position: chr6:39374780-39374999 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 101

Conread position: 285-519
Cow position: chr6:25215685-25215919 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 189

Conread position: 285-519
Cow position: chr6:47047713-47047476 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-521
Cow position: chr6:12627170-12627405 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 44, 97

Conread position: 285-524
Cow position: chr6:25792289-25792048 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 190

Conread position: 285-524
Cow position: chr6:58601946-58602189 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 151

Conread position: 285-525
Cow position: chr6:184075-183832 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr6:329996-329755 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 108

Conread position: 285-525
Cow position: chr6:477006-477250 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr6:703679-703922 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 285-525
Cow position: chr6:915100-915342 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 58, 140

Conread position: 285-525
Cow position: chr6:1409915-1409672 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 191

Conread position: 285-525
Cow position: chr6:1821159-1820918 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 132

Conread position: 285-525
Cow position: chr6:2376147-2376385 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 285-525
Cow position: chr6:2877216-2876974 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 194

Conread position: 285-525
Cow position: chr6:3150702-3150946 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr6:5749392-5749635 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 39

Conread position: 285-525
Cow position: chr6:5948314-5948068 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr6:7139873-7139630 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 285-525
Cow position: chr6:7177829-7177583 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 24

Conread position: 285-525
Cow position: chr6:10250140-10249897 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 285-525
Cow position: chr6:10645183-10645430 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 33, 194

Conread position: 285-525
Cow position: chr6:15139706-15139463 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr6:16591429-16591667 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 42, 64

Conread position: 285-525
Cow position: chr6:17596828-17596585 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 285-525
Cow position: chr6:21974138-21974380 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 42, 93

Conread position: 285-525
Cow position: chr6:24240872-24241115 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 285-525
Cow position: chr6:26669394-26669152 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 285-525
Cow position: chr6:27375454-27375212 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 42, 22

Conread position: 285-525
Cow position: chr6:28187352-28187128 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 285-525
Cow position: chr6:28490100-28489859 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 285-525
Cow position: chr6:30273426-30273183 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 285-525
Cow position: chr6:35875243-35875003 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 230

Conread position: 285-525
Cow position: chr6:39910801-39911042 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 72

Conread position: 285-525
Cow position: chr6:40276550-40276793 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 39

Conread position: 285-525
Cow position: chr6:40379163-40378921 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 183

Conread position: 285-525
Cow position: chr6:44149080-44148838 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 47, 31

Conread position: 285-525
Cow position: chr6:45587419-45587658 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 39

Conread position: 285-525
Cow position: chr6:47041740-47041494 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 58, 0

Conread position: 285-525
Cow position: chr6:51731548-51731791 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 285-525
Cow position: chr6:52694494-52694736 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 149

Conread position: 285-525
Cow position: chr6:59594391-59594613 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 285-525
Cow position: chr6:59617560-59617800 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 111

Conread position: 285-525
Cow position: chr6:65820503-65820260 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 285-525
Cow position: chr6:65907320-65907078 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 92

Conread position: 285-525
Cow position: chr6:69144035-69144279 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 128

Conread position: 285-527
Cow position: chr6:10610321-10610555 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 103

Conread position: 285-527
Cow position: chr6:12664853-12664608 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 286-527
Cow position: chr6:10679885-10680124 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 179

Conread position: 287-525
Cow position: chr6:26777698-26777459 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 74

Conread position: 288-525
Cow position: chr6:1535108-1534872 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 130

Conread position: 288-525
Cow position: chr6:11723728-11723488 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 288-525
Cow position: chr6:27528547-27528309 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 123

Conread position: 288-525
Cow position: chr6:39333402-39333159 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 288-525
Cow position: chr6:41228914-41229154 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 288-527
Cow position: chr6:10339170-10338933 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 37

Conread position: 288-527
Cow position: chr6:38273039-38273281 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 289-525
Cow position: chr6:20559637-20559411 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 7, 22

Conread position: 289-525
Cow position: chr6:40326890-40327129 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 290-527
Cow position: chr6:11269963-11269734 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 57

Conread position: 290-527
Cow position: chr6:35418833-35418597 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 34, 196

Conread position: 291-525
Cow position: chr6:44002145-44002382 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 33

Conread position: 291-526
Cow position: chr6:66233274-66233511 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 18

Conread position: 293-525
Cow position: chr6:12533279-12533521 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 294-520
Cow position: chr6:13848546-13848772 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 33, 20

Conread position: 294-525
Cow position: chr6:15478647-15478881 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 31, 169

Conread position: 294-525
Cow position: chr6:28104387-28104153 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 33, 168

Conread position: 294-525
Cow position: chr6:28703233-28702999 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 30

Conread position: 295-519
Cow position: chr6:3572072-3572299 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 295-524
Cow position: chr6:3486946-3486714 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 32, 82

Conread position: 295-525
Cow position: chr6:34890648-34890417 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 59

Conread position: 295-527
Cow position: chr6:65843093-65843328 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 296-525
Cow position: chr6:50125-49895 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 296-525
Cow position: chr6:18985569-18985786 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 28, 91

Conread position: 296-525
Cow position: chr6:21835718-21835488 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 169

Conread position: 296-525
Cow position: chr6:36528675-36528908 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 296-527
Cow position: chr6:66546955-66547185 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 24, 34

Conread position: 297-525
Cow position: chr6:14390408-14390639 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 297-525
Cow position: chr6:51716012-51716243 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 309-517
Cow position: chr6:15926062-15925859 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 21

Conread position: 328-525
Cow position: chr6:17047853-17048051 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 340-525
Cow position: chr6:65897424-65897238 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 18

Conread position: 345-525
Cow position: chr6:38206818-38206995 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 138, 64

Conread position: 347-520
Cow position: chr6:34136606-34136433 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 358-486
Cow position: chr6:12380775-12380903 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 361-520
Cow position: chr6:1098503-1098344 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 375-525
Cow position: chr6:28642978-28642828 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.