Cow genome map
| Conread name: | Pig1-132A16a |
| Conread position: | 1-151 |
| Cow position: | chr11:87155028-87154884 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-154 |
| Cow position: | chr11:81067713-81067868 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 1-303 |
| Cow position: | chr11:86578902-86579200 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 148, 103 |
| Conread position: | 1-341 |
| Cow position: | chr11:8499042-8499361 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 119 |
| Conread position: | 1-341 |
| Cow position: | chr11:74990596-74990920 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 129 |
| Conread position: | 1-346 |
| Cow position: | chr11:63478827-63479154 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 1-382 |
| Cow position: | chr11:59369059-59368696 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 142 |
| Conread position: | 1-397 |
| Cow position: | chr11:80789415-80789033 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 143 |
| Conread position: | 1-400 |
| Cow position: | chr11:40402795-40402425 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 122 |
| Conread position: | 1-402 |
| Cow position: | chr11:14650260-14649881 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 152 |
| Conread position: | 1-402 |
| Cow position: | chr11:70424366-70424746 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 1-406 |
| Cow position: | chr11:4053364-4052998 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 280 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 172, 33 |
| Conread position: | 1-407 |
| Cow position: | chr11:77746231-77745842 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 145 |
| Conread position: | 1-414 |
| Cow position: | chr11:50949928-50950343 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 67 |
| Conread position: | 1-415 |
| Cow position: | chr11:1505020-1504619 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 143 |
| Conread position: | 1-415 |
| Cow position: | chr11:25336115-25336512 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 148 |
| Conread position: | 1-415 |
| Cow position: | chr11:56652267-56651853 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 163 |
| Conread position: | 1-415 |
| Cow position: | chr11:58399308-58399695 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 102 |
| Conread position: | 1-415 |
| Cow position: | chr11:73513396-73512995 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 134 |
| Conread position: | 1-417 |
| Cow position: | chr11:2294084-2293682 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 138 |
| Conread position: | 1-417 |
| Cow position: | chr11:8444012-8443613 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 112 |
| Conread position: | 1-417 |
| Cow position: | chr11:21853275-21852866 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 144 |
| Conread position: | 1-417 |
| Cow position: | chr11:23494728-23495130 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 102 |
| Conread position: | 1-417 |
| Cow position: | chr11:30164548-30164928 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 92 |
| Conread position: | 1-417 |
| Cow position: | chr11:33000855-33001250 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 67 |
| Conread position: | 1-417 |
| Cow position: | chr11:37345919-37346303 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 153 |
| Conread position: | 1-417 |
| Cow position: | chr11:39151573-39151967 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 143 |
| Conread position: | 1-417 |
| Cow position: | chr11:47758012-47757603 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 149 |
| Conread position: | 1-417 |
| Cow position: | chr11:48658706-48659108 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 144 |
| Conread position: | 1-417 |
| Cow position: | chr11:63860667-63860266 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 79 |
| Conread position: | 1-417 |
| Cow position: | chr11:67848996-67848586 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 155 |
| Conread position: | 1-418 |
| Cow position: | chr11:31236423-31236026 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 64 |
| Conread position: | 1-420 |
| Cow position: | chr11:59871791-59872186 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 104 |
| Conread position: | 2-146 |
| Cow position: | chr11:33687496-33687351 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-188 |
| Cow position: | chr11:33688072-33687887 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 2-341 |
| Cow position: | chr11:21896718-21896405 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 224, 68 |
| Conread position: | 2-362 |
| Cow position: | chr11:10093847-10094184 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 58 |
| Conread position: | 2-396 |
| Cow position: | chr11:38235792-38235417 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 84 |
| Conread position: | 2-417 |
| Cow position: | chr11:8246167-8246562 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 37 |
| Conread position: | 2-417 |
| Cow position: | chr11:71332479-71332877 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 161 |
| Conread position: | 3-153 |
| Cow position: | chr11:21372103-21371953 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-171 |
| Cow position: | chr11:32108749-32108911 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-286 |
| Cow position: | chr11:37279602-37279336 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 3-327 |
| Cow position: | chr11:26068139-26067817 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 149 |
| Conread position: | 4-116 |
| Cow position: | chr11:52128188-52128300 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-412 |
| Cow position: | chr11:9432358-9432747 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 92 |
| Conread position: | 4-416 |
| Cow position: | chr11:25564731-25565124 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 134 |
| Conread position: | 4-417 |
| Cow position: | chr11:49171519-49171126 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 131 |
| Conread position: | 6-154 |
| Cow position: | chr11:9153917-9153776 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 6-177 |
| Cow position: | chr11:29663073-29662902 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-178 |
| Cow position: | chr11:75402529-75402361 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 6-317 |
| Cow position: | chr11:7229341-7229635 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 6-341 |
| Cow position: | chr11:38832498-38832180 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 6-341 |
| Cow position: | chr11:40773089-40772774 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 6-341 |
| Cow position: | chr11:53429041-53428708 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 129 |
| Conread position: | 6-341 |
| Cow position: | chr11:70030400-70030718 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 150 |
| Conread position: | 6-358 |
| Cow position: | chr11:19061093-19060757 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 150 |
| Conread position: | 6-359 |
| Cow position: | chr11:77034111-77033775 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 124 |
| Conread position: | 6-362 |
| Cow position: | chr11:26121939-26121603 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 150 |
| Conread position: | 6-394 |
| Cow position: | chr11:43510994-43510623 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 150 |
| Conread position: | 6-404 |
| Cow position: | chr11:35738363-35737984 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 150 |
| Conread position: | 6-411 |
| Cow position: | chr11:72369035-72369423 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-414 |
| Cow position: | chr11:3238282-3238677 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 134 |
| Conread position: | 6-414 |
| Cow position: | chr11:32455035-32455429 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-415 |
| Cow position: | chr11:14259980-14259589 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-415 |
| Cow position: | chr11:27724920-27724525 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 132 |
| Conread position: | 6-415 |
| Cow position: | chr11:35142351-35141960 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 133 |
| Conread position: | 6-415 |
| Cow position: | chr11:36930553-36930156 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 133 |
| Conread position: | 6-415 |
| Cow position: | chr11:46781088-46780694 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 109 |
| Conread position: | 6-415 |
| Cow position: | chr11:66859007-66858608 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 157 |
| Conread position: | 6-416 |
| Cow position: | chr11:3999510-3999142 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 297 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 358, 33 |
| Conread position: | 6-416 |
| Cow position: | chr11:6343440-6343836 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-416 |
| Cow position: | chr11:10851095-10851491 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 125 |
| Conread position: | 6-417 |
| Cow position: | chr11:4024370-4023980 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 36 |
| Conread position: | 6-417 |
| Cow position: | chr11:5273593-5273197 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 382, 157 |
| Conread position: | 6-417 |
| Cow position: | chr11:7120982-7120572 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 144 |
| Conread position: | 6-417 |
| Cow position: | chr11:9388318-9388712 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 144 |
| Conread position: | 6-417 |
| Cow position: | chr11:11990978-11991377 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 152 |
| Conread position: | 6-417 |
| Cow position: | chr11:12317089-12316684 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 157 |
| Conread position: | 6-417 |
| Cow position: | chr11:13087686-13087289 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:16547969-16547572 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:17854075-17854472 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:26592796-26592400 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:28226797-28226400 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:30087857-30088254 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:31834280-31833883 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:35542087-35541699 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 393, 46 |
| Conread position: | 6-417 |
| Cow position: | chr11:38505250-38504853 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:38574504-38574107 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:38599733-38599336 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:44154102-44153705 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 150 |
| Conread position: | 6-417 |
| Cow position: | chr11:44255054-44255449 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 150 |
| Conread position: | 6-417 |
| Cow position: | chr11:44580252-44579856 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 40 |
| Conread position: | 6-417 |
| Cow position: | chr11:44870502-44870897 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 31 |
| Conread position: | 6-417 |
| Cow position: | chr11:47972871-47972490 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:51034257-51034654 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:52846456-52846853 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:61397640-61397243 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:62009820-62009423 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:62791876-62792269 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 129 |
| Conread position: | 6-417 |
| Cow position: | chr11:63390501-63390104 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:63652696-63652271 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 318 |
| Conread position: | 6-417 |
| Cow position: | chr11:67296026-67295628 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 129 |
| Conread position: | 6-417 |
| Cow position: | chr11:67920357-67919964 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 90 |
| Conread position: | 6-417 |
| Cow position: | chr11:73798720-73798328 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 129 |
| Conread position: | 6-417 |
| Cow position: | chr11:74389180-74389573 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:75256171-75256568 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 150 |
| Conread position: | 6-417 |
| Cow position: | chr11:83001010-83001406 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr11:84967089-84967486 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-418 |
| Cow position: | chr11:5482465-5482067 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 150 |
| Conread position: | 6-425 |
| Cow position: | chr11:38842607-38843002 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 91 |
| Conread position: | 7-415 |
| Cow position: | chr11:65281991-65282385 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 133 |
| Conread position: | 7-417 |
| Cow position: | chr11:17104720-17104328 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 132 |
| Conread position: | 7-417 |
| Cow position: | chr11:23883329-23883709 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 123 |
| Conread position: | 7-417 |
| Cow position: | chr11:27922777-27923214 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 325 |
| Conread position: | 7-417 |
| Cow position: | chr11:56916740-56916345 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 65 |
| Conread position: | 8-417 |
| Cow position: | chr11:30255420-30255816 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 132 |
| Conread position: | 10-415 |
| Cow position: | chr11:11591965-11592357 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 129 |
| Conread position: | 10-417 |
| Cow position: | chr11:56463347-56463739 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 145 |
| Conread position: | 10-417 |
| Cow position: | chr11:67453640-67454031 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 102 |
| Conread position: | 10-417 |
| Cow position: | chr11:71078415-71078803 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 11-418 |
| Cow position: | chr11:7719529-7719131 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 128 |
| Conread position: | 12-178 |
| Cow position: | chr11:35241882-35241718 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 12-467 |
| Cow position: | chr11:76370853-76370406 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 142 |
| Conread position: | 14-417 |
| Cow position: | chr11:70602294-70601906 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 130 |
| Conread position: | 16-154 |
| Cow position: | chr11:32956824-32956686 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-154 |
| Cow position: | chr11:32978010-32977872 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-415 |
| Cow position: | chr11:81576689-81576311 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 80 |
| Conread position: | 16-417 |
| Cow position: | chr11:66664428-66664042 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 111 |
| Conread position: | 18-414 |
| Cow position: | chr11:10214546-10214133 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 283 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 30, 115 |
| Conread position: | 25-417 |
| Cow position: | chr11:25759743-25760122 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 113 |
| Conread position: | 32-339 |
| Cow position: | chr11:32068247-32067958 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 66, 24 |
| Conread position: | 44-417 |
| Cow position: | chr11:40139551-40139198 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 16 |
| Conread position: | 45-417 |
| Cow position: | chr11:37304209-37304562 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 69 |
| Conread position: | 64-417 |
| Cow position: | chr11:52127950-52127612 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 50 |
| Conread position: | 75-415 |
| Cow position: | chr11:79995700-79995379 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 70 |
| Conread position: | 76-420 |
| Cow position: | chr11:71271981-71271657 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 247 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 288, 72 |
| Conread position: | 92-415 |
| Cow position: | chr11:44488052-44488376 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 7 |
| Conread position: | 109-406 |
| Cow position: | chr11:62873653-62873353 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 125-388 |
| Cow position: | chr11:75206108-75206381 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 150-415 |
| Cow position: | chr11:41024925-41025192 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 159 |
| Conread position: | 151-402 |
| Cow position: | chr11:27906441-27906675 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 153-398 |
| Cow position: | chr11:11996866-11996629 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 16, 75 |
| Conread position: | 164-416 |
| Cow position: | chr11:41577830-41577578 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 5, 63 |
| Conread position: | 166-417 |
| Cow position: | chr11:73137703-73137956 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 143 |
| Conread position: | 167-417 |
| Cow position: | chr11:18116479-18116732 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 79 |
| Conread position: | 169-402 |
| Cow position: | chr11:35241750-35241523 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 195, 12 |
| Conread position: | 169-415 |
| Cow position: | chr11:80827197-80826946 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 141, 208 |
| Conread position: | 169-417 |
| Cow position: | chr11:1268377-1268127 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 140 |
| Conread position: | 169-417 |
| Cow position: | chr11:2421595-2421845 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 140 |
| Conread position: | 169-417 |
| Cow position: | chr11:25524973-25525223 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 169, 140 |
| Conread position: | 169-417 |
| Cow position: | chr11:27935061-27934816 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 60 |
| Conread position: | 169-417 |
| Cow position: | chr11:36167630-36167380 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 192, 140 |
| Conread position: | 169-417 |
| Cow position: | chr11:44043360-44043602 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 230, 140 |
| Conread position: | 169-417 |
| Cow position: | chr11:49099525-49099270 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 210 |
| Conread position: | 172-415 |
| Cow position: | chr11:41178082-41178326 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 132 |
| Conread position: | 173-402 |
| Cow position: | chr11:53772799-53773026 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 114 |
| Conread position: | 173-417 |
| Cow position: | chr11:72050110-72050358 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 154, 136 |
| Conread position: | 174-417 |
| Cow position: | chr11:27938726-27938970 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 190, 48 |
| Conread position: | 176-369 |
| Cow position: | chr11:84723311-84723505 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 160 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 56, 82 |
| Conread position: | 177-417 |
| Cow position: | chr11:17890529-17890294 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 222, 77 |
| Conread position: | 180-417 |
| Cow position: | chr11:40300628-40300389 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 129 |
| Conread position: | 184-415 |
| Cow position: | chr11:1492725-1492497 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 173, 102 |
Show alignments to all cow chromosomes.