Cow genome map
| Conread name: | Pig1-132A16a |
| Conread position: | 1-128 |
| Cow position: | chr25:28420656-28420527 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-136 |
| Cow position: | chr25:26931145-26931280 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-154 |
| Cow position: | chr25:32577613-32577460 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-286 |
| Cow position: | chr25:23366711-23366985 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 149 |
| Conread position: | 1-390 |
| Cow position: | chr25:37648479-37648839 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 33 |
| Conread position: | 1-400 |
| Cow position: | chr25:33688158-33687778 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 43 |
| Conread position: | 1-411 |
| Cow position: | chr25:17554210-17553825 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 90 |
| Conread position: | 1-411 |
| Cow position: | chr25:41386043-41385659 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 363, 32 |
| Conread position: | 1-414 |
| Cow position: | chr25:19682344-19682734 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 224, 9 |
| Conread position: | 1-414 |
| Cow position: | chr25:41364917-41364523 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 363, 33 |
| Conread position: | 1-415 |
| Cow position: | chr25:10136866-10137273 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 32 |
| Conread position: | 1-415 |
| Cow position: | chr25:16922740-16922347 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 398, 18 |
| Conread position: | 1-415 |
| Cow position: | chr25:17562091-17562513 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 44 |
| Conread position: | 1-415 |
| Cow position: | chr25:25826497-25826902 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 1-416 |
| Cow position: | chr25:23393922-23394312 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 48 |
| Conread position: | 1-417 |
| Cow position: | chr25:11665720-11666113 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 61 |
| Conread position: | 1-417 |
| Cow position: | chr25:16801489-16801886 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 155 |
| Conread position: | 1-417 |
| Cow position: | chr25:17657669-17658063 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 102 |
| Conread position: | 1-417 |
| Cow position: | chr25:17993092-17992696 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 33 |
| Conread position: | 1-417 |
| Cow position: | chr25:23325977-23325576 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 130 |
| Conread position: | 1-417 |
| Cow position: | chr25:33838432-33838824 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 107 |
| Conread position: | 1-417 |
| Cow position: | chr25:36350787-36351189 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 134 |
| Conread position: | 1-417 |
| Cow position: | chr25:37593454-37593854 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 1-418 |
| Cow position: | chr25:18486511-18486926 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 17 |
| Conread position: | 2-154 |
| Cow position: | chr25:12756377-12756218 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 2-177 |
| Cow position: | chr25:26850166-26849993 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 2-317 |
| Cow position: | chr25:27019189-27018888 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 14, 138 |
| Conread position: | 3-417 |
| Cow position: | chr25:14954980-14954596 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 58 |
| Conread position: | 3-417 |
| Cow position: | chr25:41135694-41135307 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 41 |
| Conread position: | 3-418 |
| Cow position: | chr25:41098140-41097745 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 4-415 |
| Cow position: | chr25:26914284-26914685 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 72 |
| Conread position: | 4-417 |
| Cow position: | chr25:18474253-18474642 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 32 |
| Conread position: | 6-105 |
| Cow position: | chr25:11896672-11896771 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 96, 80 |
| Conread position: | 6-153 |
| Cow position: | chr25:14756358-14756210 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 6-172 |
| Cow position: | chr25:13787028-13787193 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 6-177 |
| Cow position: | chr25:20633815-20633984 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 6-178 |
| Cow position: | chr25:27231413-27231589 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 6-337 |
| Cow position: | chr25:12939153-12938839 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 6-346 |
| Cow position: | chr25:6955122-6955444 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 6-394 |
| Cow position: | chr25:28275614-28275246 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 150 |
| Conread position: | 6-417 |
| Cow position: | chr25:11043673-11044066 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 86 |
| Conread position: | 6-417 |
| Cow position: | chr25:13430058-13429676 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 6-417 |
| Cow position: | chr25:18190322-18189928 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 90 |
| Conread position: | 6-417 |
| Cow position: | chr25:18886427-18886033 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 146 |
| Conread position: | 6-417 |
| Cow position: | chr25:19337271-19336876 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 111 |
| Conread position: | 6-417 |
| Cow position: | chr25:26781032-26780635 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr25:28862926-28863320 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 150 |
| Conread position: | 6-417 |
| Cow position: | chr25:32610366-32609969 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr25:34164507-34164111 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 46 |
| Conread position: | 6-417 |
| Cow position: | chr25:34673532-34673131 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 133 |
| Conread position: | 6-417 |
| Cow position: | chr25:35446005-35446391 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 28 |
| Conread position: | 6-417 |
| Cow position: | chr25:35755189-35754796 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 66 |
| Conread position: | 6-417 |
| Cow position: | chr25:41356745-41356352 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 135 |
| Conread position: | 6-418 |
| Cow position: | chr25:8655346-8655741 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 108 |
| Conread position: | 7-417 |
| Cow position: | chr25:35553722-35554119 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 132 |
| Conread position: | 10-417 |
| Cow position: | chr25:41121062-41121453 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 146 |
| Conread position: | 16-154 |
| Cow position: | chr25:25480537-25480404 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 16-423 |
| Cow position: | chr25:24637076-24636687 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 46, 42 |
| Conread position: | 19-414 |
| Cow position: | chr25:9413414-9413791 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 120 |
| Conread position: | 19-417 |
| Cow position: | chr25:4858433-4858047 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 121 |
| Conread position: | 30-417 |
| Cow position: | chr25:19923599-19923970 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 109 |
| Conread position: | 30-442 |
| Cow position: | chr25:2516080-2516475 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 293 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 192, 73 |
| Conread position: | 74-417 |
| Cow position: | chr25:35613214-35612887 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 71 |
| Conread position: | 83-416 |
| Cow position: | chr25:2047440-2047111 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 86 |
| Conread position: | 88-402 |
| Cow position: | chr25:21025113-21024807 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 70 |
| Conread position: | 169-417 |
| Cow position: | chr25:11896293-11896044 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 140 |
| Conread position: | 169-417 |
| Cow position: | chr25:21950326-21950578 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 57, 135 |
| Conread position: | 169-417 |
| Cow position: | chr25:22711489-22711734 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 85 |
| Conread position: | 172-417 |
| Cow position: | chr25:36127703-36127457 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 190, 118 |
| Conread position: | 173-402 |
| Cow position: | chr25:33979204-33978986 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 59, 131 |
| Conread position: | 181-415 |
| Cow position: | chr25:13956177-13955941 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 128 |
Show alignments to all cow chromosomes.