Cow genome map
| Conread name: | Pig1-132A16a |
| Conread position: | 1-148 |
| Cow position: | chr26:19177371-19177510 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-341 |
| Cow position: | chr26:3556806-3556502 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 248 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-367 |
| Cow position: | chr26:17288115-17288464 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 229, 143 |
| Conread position: | 1-413 |
| Cow position: | chr26:6476372-6475972 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 144 |
| Conread position: | 1-414 |
| Cow position: | chr26:8308460-8308050 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 70 |
| Conread position: | 1-414 |
| Cow position: | chr26:17169135-17169526 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 138 |
| Conread position: | 1-415 |
| Cow position: | chr26:20496841-20497245 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 28 |
| Conread position: | 1-416 |
| Cow position: | chr26:8810162-8810561 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 96 |
| Conread position: | 1-417 |
| Cow position: | chr26:1088489-1088884 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 105 |
| Conread position: | 1-417 |
| Cow position: | chr26:4324409-4324012 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 99 |
| Conread position: | 1-417 |
| Cow position: | chr26:20255929-20256325 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 1-417 |
| Cow position: | chr26:22691695-22692092 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 95 |
| Conread position: | 1-418 |
| Cow position: | chr26:9100675-9100284 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 38 |
| Conread position: | 1-432 |
| Cow position: | chr26:13773356-13773767 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 155 |
| Conread position: | 2-417 |
| Cow position: | chr26:17429169-17428759 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 154 |
| Conread position: | 2-417 |
| Cow position: | chr26:30725612-30725202 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 162 |
| Conread position: | 3-417 |
| Cow position: | chr26:6038387-6037973 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 161 |
| Conread position: | 4-417 |
| Cow position: | chr26:3187064-3187457 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 4-417 |
| Cow position: | chr26:13183618-13184017 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 135 |
| Conread position: | 4-417 |
| Cow position: | chr26:20218561-20218948 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 6 |
| Conread position: | 6-154 |
| Cow position: | chr26:1915650-1915798 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-337 |
| Cow position: | chr26:17393585-17393276 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 6-343 |
| Cow position: | chr26:2201840-2202158 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 6-396 |
| Cow position: | chr26:4729014-4728646 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 6-402 |
| Cow position: | chr26:9694486-9694109 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 124 |
| Conread position: | 6-410 |
| Cow position: | chr26:12585228-12584838 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 133 |
| Conread position: | 6-411 |
| Cow position: | chr26:3862768-3862378 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 71 |
| Conread position: | 6-414 |
| Cow position: | chr26:3564729-3564338 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 393, 150 |
| Conread position: | 6-416 |
| Cow position: | chr26:5679840-5680245 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 159 |
| Conread position: | 6-417 |
| Cow position: | chr26:386990-387385 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr26:1620965-1621354 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 46 |
| Conread position: | 6-417 |
| Cow position: | chr26:2670507-2670088 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 34 |
| Conread position: | 6-417 |
| Cow position: | chr26:3230778-3231172 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 106 |
| Conread position: | 6-417 |
| Cow position: | chr26:6843910-6843515 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 148 |
| Conread position: | 6-417 |
| Cow position: | chr26:7459654-7459260 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 6-417 |
| Cow position: | chr26:7559306-7558911 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr26:8084136-8084533 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr26:13806717-13806322 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 123 |
| Conread position: | 6-417 |
| Cow position: | chr26:14487947-14487558 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 43 |
| Conread position: | 6-417 |
| Cow position: | chr26:15145804-15146201 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr26:18857430-18857821 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 80 |
| Conread position: | 6-417 |
| Cow position: | chr26:22831728-22831332 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 138 |
| Conread position: | 6-417 |
| Cow position: | chr26:23889722-23890110 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 106 |
| Conread position: | 6-417 |
| Cow position: | chr26:28706748-28706356 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 43 |
| Conread position: | 6-417 |
| Cow position: | chr26:29433542-29433939 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr26:30594319-30593933 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr26:30786237-30786633 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 124 |
| Conread position: | 7-104 |
| Cow position: | chr26:19348082-19347985 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-417 |
| Cow position: | chr26:799989-800387 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 132 |
| Conread position: | 10-417 |
| Cow position: | chr26:26286173-26286566 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 130 |
| Conread position: | 10-417 |
| Cow position: | chr26:35423812-35424204 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 30 |
| Conread position: | 23-341 |
| Cow position: | chr26:34015165-34015466 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 21 |
| Conread position: | 23-417 |
| Cow position: | chr26:12662412-12662043 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 57 |
| Conread position: | 40-341 |
| Cow position: | chr26:11902663-11902970 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 67, 276 |
| Conread position: | 60-417 |
| Cow position: | chr26:3705930-3706268 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 91 |
| Conread position: | 61-417 |
| Cow position: | chr26:756010-755669 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 83 |
| Conread position: | 68-415 |
| Cow position: | chr26:23600657-23600330 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 46 |
| Conread position: | 164-417 |
| Cow position: | chr26:3571994-3571739 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 145 |
| Conread position: | 169-394 |
| Cow position: | chr26:11335524-11335764 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 76 |
| Conread position: | 169-417 |
| Cow position: | chr26:1636958-1636707 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 77, 141 |
| Conread position: | 169-417 |
| Cow position: | chr26:4728622-4728374 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 193, 139 |
| Conread position: | 169-417 |
| Cow position: | chr26:18383952-18383711 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 193, 34 |
| Conread position: | 169-417 |
| Cow position: | chr26:33253030-33252780 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 140 |
| Conread position: | 174-416 |
| Cow position: | chr26:13556752-13556510 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 50 |
| Conread position: | 174-466 |
| Cow position: | chr26:30569669-30569373 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 130 |
| Conread position: | 175-417 |
| Cow position: | chr26:1340833-1341084 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 93, 140 |
Show alignments to all cow chromosomes.