Cow genome map

Conread name: Pig1-132A16a

Conread position: 1-140
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-143
Cow position:
Alignm length: 143
Alignm identity: 118
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1-154
Cow position:
Alignm length: 154
Alignm identity: 128
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 1-154
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 1-154
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-286
Cow position:
Alignm length: 287
Alignm identity: 200
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 62, 72

Conread position: 1-334
Cow position:
Alignm length: 336
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 162

Conread position: 1-341
Cow position:
Alignm length: 344
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 162

Conread position: 1-370
Cow position:
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 114

Conread position: 1-394
Cow position:
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 144

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 284
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 148

Conread position: 1-402
Cow position:
Alignm length: 403
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 108

Conread position: 1-402
Cow position:
Alignm length: 404
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 32

Conread position: 1-414
Cow position:
Alignm length: 418
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 138

Conread position: 1-414
Cow position:
Alignm length: 423
Alignm identity: 299
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 247, 45

Conread position: 1-414
Cow position:
Alignm length: 418
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 107

Conread position: 1-415
Cow position:
Alignm length: 421
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 108

Conread position: 1-415
Cow position:
Alignm length: 421
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 13

Conread position: 1-415
Cow position:
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 27

Conread position: 1-415
Cow position:
Alignm length: 423
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 109

Conread position: 1-415
Cow position:
Alignm length: 421
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 129

Conread position: 1-415
Cow position:
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 111

Conread position: 1-415
Cow position:
Alignm length: 420
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 143

Conread position: 1-417
Cow position:
Alignm length: 424
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 149

Conread position: 1-417
Cow position:
Alignm length: 422
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 38

Conread position: 1-417
Cow position:
Alignm length: 424
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 117

Conread position: 1-417
Cow position:
Alignm length: 421
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 14

Conread position: 1-417
Cow position:
Alignm length: 421
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 38

Conread position: 1-417
Cow position:
Alignm length: 421
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 155

Conread position: 1-417
Cow position:
Alignm length: 425
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 71

Conread position: 1-417
Cow position:
Alignm length: 421
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 138

Conread position: 1-417
Cow position:
Alignm length: 421
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 162

Conread position: 1-417
Cow position:
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 61

Conread position: 1-418
Cow position:
Alignm length: 423
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 144

Conread position: 1-418
Cow position:
Alignm length: 432
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 48

Conread position: 1-418
Cow position:
Alignm length: 429
Alignm identity: 298
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 183, 156

Conread position: 2-329
Cow position:
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 101

Conread position: 2-360
Cow position:
Alignm length: 359
Alignm identity: 257
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 2-417
Cow position:
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 158

Conread position: 2-420
Cow position:
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 116

Conread position: 2-422
Cow position:
Alignm length: 425
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 43

Conread position: 3-417
Cow position:
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 4-344
Cow position:
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 6-136
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 6-137
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 6-149
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 6-177
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 157, 0

Conread position: 6-194
Cow position:
Alignm length: 189
Alignm identity: 113
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 133, 0

Conread position: 6-299
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 282, 82

Conread position: 6-316
Cow position:
Alignm length: 312
Alignm identity: 222
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 62, 151

Conread position: 6-329
Cow position:
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 6-341
Cow position:
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 6-361
Cow position:
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 133

Conread position: 6-370
Cow position:
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 150

Conread position: 6-383
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 46

Conread position: 6-394
Cow position:
Alignm length: 390
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 133

Conread position: 6-412
Cow position:
Alignm length: 410
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 150

Conread position: 6-414
Cow position:
Alignm length: 413
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-414
Cow position:
Alignm length: 413
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-414
Cow position:
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 133

Conread position: 6-415
Cow position:
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-415
Cow position:
Alignm length: 416
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 152

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 20

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 58

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 53

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 32

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 150

Conread position: 6-417
Cow position:
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-417
Cow position:
Alignm length: 417
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 150

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 150

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-417
Cow position:
Alignm length: 417
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 80

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 148

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-417
Cow position:
Alignm length: 417
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 74

Conread position: 6-417
Cow position:
Alignm length: 414
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 150

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 150

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 107

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 46

Conread position: 6-417
Cow position:
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 65

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 152

Conread position: 6-417
Cow position:
Alignm length: 417
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-417
Cow position:
Alignm length: 415
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 133

Conread position: 6-417
Cow position:
Alignm length: 425
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 158

Conread position: 6-417
Cow position:
Alignm length: 418
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 139

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-417
Cow position:
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 150

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 38

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 90

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 46

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 150

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-418
Cow position:
Alignm length: 419
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 135

Conread position: 7-319
Cow position:
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 8-415
Cow position:
Alignm length: 416
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 158

Conread position: 10-149
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 10-402
Cow position:
Alignm length: 401
Alignm identity: 282
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 271, 111

Conread position: 10-417
Cow position:
Alignm length: 412
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 129

Conread position: 10-417
Cow position:
Alignm length: 413
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 129

Conread position: 13-341
Cow position:
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 14-402
Cow position:
Alignm length: 391
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 59

Conread position: 14-415
Cow position:
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 100

Conread position: 15-418
Cow position:
Alignm length: 407
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 34

Conread position: 19-137
Cow position:
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 19-417
Cow position:
Alignm length: 403
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 120

Conread position: 20-402
Cow position:
Alignm length: 388
Alignm identity: 255
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 31, 69

Conread position: 29-415
Cow position:
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 29

Conread position: 29-417
Cow position:
Alignm length: 400
Alignm identity: 280
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 196, 37

Conread position: 30-395
Cow position:
Alignm length: 367
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 27

Conread position: 30-417
Cow position:
Alignm length: 393
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 109

Conread position: 33-415
Cow position:
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 80

Conread position: 41-417
Cow position:
Alignm length: 382
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 17

Conread position: 46-418
Cow position:
Alignm length: 388
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 109

Conread position: 60-402
Cow position:
Alignm length: 344
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 14

Conread position: 65-418
Cow position:
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 74

Conread position: 72-414
Cow position:
Alignm length: 347
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 290, 67

Conread position: 72-417
Cow position:
Alignm length: 354
Alignm identity: 254
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 153, 50

Conread position: 103-415
Cow position:
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 13

Conread position: 108-317
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 8

Conread position: 163-400
Cow position:
Alignm length: 239
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 199, 140

Conread position: 164-402
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 140

Conread position: 164-415
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 142

Conread position: 168-402
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 161, 42

Conread position: 169-394
Cow position:
Alignm length: 227
Alignm identity: 171
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 195, 140

Conread position: 169-415
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 140

Conread position: 169-415
Cow position:
Alignm length: 250
Alignm identity: 179
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 230, 57

Conread position: 169-415
Cow position:
Alignm length: 251
Alignm identity: 183
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 192, 55

Conread position: 169-417
Cow position:
Alignm length: 253
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 193, 140

Conread position: 169-417
Cow position:
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 140

Conread position: 169-417
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 77, 131

Conread position: 169-417
Cow position:
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 140

Conread position: 169-417
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 47, 129

Conread position: 172-417
Cow position:
Alignm length: 250
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 82

Conread position: 172-417
Cow position:
Alignm length: 250
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 61

Conread position: 172-417
Cow position:
Alignm length: 250
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 41

Conread position: 172-418
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 73, 52

Conread position: 173-402
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 191, 113

Conread position: 173-417
Cow position:
Alignm length: 265
Alignm identity: 202
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 72, 174

Conread position: 174-341
Cow position:
Alignm length: 168
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 174-373
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 143

Conread position: 174-415
Cow position:
Alignm length: 250
Alignm identity: 181
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 142, 129

Conread position: 174-429
Cow position:
Alignm length: 260
Alignm identity: 192
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 190, 41

Show alignments to all cow chromosomes.