Cow genome map
Conread name: | Pig1-132A16b |
Conread position: | 1-146 |
Cow position: | chr17:24876860-24876722 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 1-149 |
Cow position: | chr17:11032287-11032434 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 1-250 |
Cow position: | chr17:30899062-30899316 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 180 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 24, 14 |
Conread position: | 1-285 |
Cow position: | chr17:37415751-37415488 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 203 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 1-341 |
Cow position: | chr17:1457242-1456920 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 234 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 243, 53 |
Conread position: | 1-365 |
Cow position: | chr17:14249971-14249625 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 155 |
Conread position: | 1-371 |
Cow position: | chr17:20084673-20084330 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 363, 118 |
Conread position: | 1-406 |
Cow position: | chr17:23337912-23337535 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 112 |
Conread position: | 1-415 |
Cow position: | chr17:15374538-15374916 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 299 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 32, 14 |
Conread position: | 1-415 |
Cow position: | chr17:22774323-22773921 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 328, 32 |
Conread position: | 1-417 |
Cow position: | chr17:30563-30981 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 293 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 89, 79 |
Conread position: | 1-417 |
Cow position: | chr17:16118325-16117938 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 51 |
Conread position: | 1-417 |
Cow position: | chr17:16447345-16446943 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 162 |
Conread position: | 1-417 |
Cow position: | chr17:17221450-17221836 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 114 |
Conread position: | 1-418 |
Cow position: | chr17:12290350-12289929 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 153 |
Conread position: | 2-417 |
Cow position: | chr17:15351183-15351589 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 226, 56 |
Conread position: | 2-417 |
Cow position: | chr17:16216573-16216966 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 400, 65 |
Conread position: | 2-417 |
Cow position: | chr17:20094021-20093625 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 19 |
Conread position: | 2-418 |
Cow position: | chr17:18200874-18201264 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 299 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 222, 43 |
Conread position: | 3-417 |
Cow position: | chr17:36747382-36746982 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 227, 36 |
Conread position: | 4-154 |
Cow position: | chr17:2177120-2177269 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 125 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 4-341 |
Cow position: | chr17:18123530-18123217 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 234 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 241, 30 |
Conread position: | 5-402 |
Cow position: | chr17:254238-254609 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 359, 104 |
Conread position: | 6-142 |
Cow position: | chr17:18421527-18421663 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 112 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-147 |
Cow position: | chr17:15140197-15140056 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-163 |
Cow position: | chr17:25551552-25551395 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-177 |
Cow position: | chr17:29950354-29950524 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 129 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 157, 0 |
Conread position: | 6-268 |
Cow position: | chr17:40810893-40811165 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 190 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 134, 145 |
Conread position: | 6-329 |
Cow position: | chr17:4635633-4635343 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 235 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 6-395 |
Cow position: | chr17:24785332-24785704 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 358, 133 |
Conread position: | 6-415 |
Cow position: | chr17:2201439-2201834 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 358, 150 |
Conread position: | 6-415 |
Cow position: | chr17:21716604-21716999 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 157 |
Conread position: | 6-416 |
Cow position: | chr17:8222847-8223244 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 157 |
Conread position: | 6-417 |
Cow position: | chr17:184289-184686 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 133 |
Conread position: | 6-417 |
Cow position: | chr17:1709501-1709882 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 290 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 355, 28 |
Conread position: | 6-417 |
Cow position: | chr17:4063480-4063868 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 150 |
Conread position: | 6-417 |
Cow position: | chr17:4480740-4480344 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 69 |
Conread position: | 6-417 |
Cow position: | chr17:6071682-6072066 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 151 |
Conread position: | 6-417 |
Cow position: | chr17:8212201-8212593 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 39 |
Conread position: | 6-417 |
Cow position: | chr17:11083993-11083601 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 358, 150 |
Conread position: | 6-417 |
Cow position: | chr17:14212876-14212481 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 108 |
Conread position: | 6-417 |
Cow position: | chr17:14242968-14243371 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 236, 133 |
Conread position: | 6-417 |
Cow position: | chr17:15438933-15439330 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 133 |
Conread position: | 6-417 |
Cow position: | chr17:16505605-16505207 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 339, 133 |
Conread position: | 6-417 |
Cow position: | chr17:16903721-16904118 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 358, 150 |
Conread position: | 6-417 |
Cow position: | chr17:18777688-18777297 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 125 |
Conread position: | 6-417 |
Cow position: | chr17:28024760-28024352 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 117 |
Conread position: | 6-417 |
Cow position: | chr17:29824820-29824421 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 135 |
Conread position: | 6-417 |
Cow position: | chr17:36284409-36284806 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 150 |
Conread position: | 6-425 |
Cow position: | chr17:2244924-2244526 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 62 |
Conread position: | 10-177 |
Cow position: | chr17:2583538-2583699 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 127 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 10-417 |
Cow position: | chr17:731346-730957 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 354, 66 |
Conread position: | 10-417 |
Cow position: | chr17:2265334-2265727 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 352, 129 |
Conread position: | 11-324 |
Cow position: | chr17:38829029-38829321 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 39 |
Conread position: | 12-402 |
Cow position: | chr17:980037-979667 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 239, 141 |
Conread position: | 12-417 |
Cow position: | chr17:8994192-8993802 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 350, 127 |
Conread position: | 13-413 |
Cow position: | chr17:3652578-3652192 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 349, 126 |
Conread position: | 24-414 |
Cow position: | chr17:36790225-36790594 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 111 |
Conread position: | 29-415 |
Cow position: | chr17:2839187-2839549 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 69 |
Conread position: | 33-417 |
Cow position: | chr17:29075198-29074850 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 277 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 371, 31 |
Conread position: | 39-417 |
Cow position: | chr17:148088-148447 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 53 |
Conread position: | 39-417 |
Cow position: | chr17:16870120-16869764 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 324, 60 |
Conread position: | 59-416 |
Cow position: | chr17:15228634-15228292 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 305, 93 |
Conread position: | 98-288 |
Cow position: | chr17:20033628-20033815 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 142 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 53, 18 |
Conread position: | 148-417 |
Cow position: | chr17:5899296-5899034 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 201 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 13, 81 |
Conread position: | 169-415 |
Cow position: | chr17:19998383-19998628 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 119 |
Conread position: | 169-417 |
Cow position: | chr17:14006703-14006947 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 189 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 173, 58 |
Conread position: | 169-417 |
Cow position: | chr17:24031090-24031336 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 186 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 228, 123 |
Conread position: | 169-417 |
Cow position: | chr17:43991773-43992023 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 140 |
Conread position: | 172-372 |
Cow position: | chr17:38616930-38617130 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 154 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 192, 131 |
Conread position: | 172-417 |
Cow position: | chr17:3131300-3131547 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 185 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 189, 86 |
Conread position: | 172-417 |
Cow position: | chr17:11385747-11385993 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 189 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 192, 45 |
Conread position: | 172-417 |
Cow position: | chr17:21181779-21182026 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 137 |
Conread position: | 173-385 |
Cow position: | chr17:4920727-4920946 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 165 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 61, 143 |
Conread position: | 173-399 |
Cow position: | chr17:15304325-15304104 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 167 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 191, 51 |
Conread position: | 174-406 |
Cow position: | chr17:11382505-11382277 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 172 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 190, 113 |
Conread position: | 174-417 |
Cow position: | chr17:2081248-2081488 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 186 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 114, 66 |
Conread position: | 174-417 |
Cow position: | chr17:29471724-29471969 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 129 |
Conread position: | 176-400 |
Cow position: | chr17:13717001-13716784 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 161 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 112, 60 |
Show alignments to all cow chromosomes.