Cow genome map


           Conread name:
           Pig1-132A16b
        

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-149
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1-250
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1-341
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               243, 53
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 155
               

               Conread position:
               1-371
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               363, 118
               

               Conread position:
               1-406
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 112
               

               Conread position:
               1-415
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               299
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               1-415
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               328, 32
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 51
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 162
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 114
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 153
               

               Conread position:
               2-417
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 56
               

               Conread position:
               2-417
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               400, 65
               

               Conread position:
               2-417
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               2-418
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               299
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               222, 43
               

               Conread position:
               3-417
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 36
               

               Conread position:
               4-154
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               4-341
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               241, 30
               

               Conread position:
               5-402
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               359, 104
               

               Conread position:
               6-142
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-147
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-163
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-177
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               6-268
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               134, 145
               

               Conread position:
               6-329
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               6-395
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 133
               

               Conread position:
               6-415
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 150
               

               Conread position:
               6-415
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 157
               

               Conread position:
               6-416
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 157
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 133
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               290
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               355, 28
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 150
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 69
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 151
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 39
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 150
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 108
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 133
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 133
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               339, 133
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 150
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 125
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 117
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 135
               

               Conread position:
               6-417
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 150
               

               Conread position:
               6-425
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 62
               

               Conread position:
               10-177
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               10-417
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               354, 66
               

               Conread position:
               10-417
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               352, 129
               

               Conread position:
               11-324
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 39
               

               Conread position:
               12-402
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 141
               

               Conread position:
               12-417
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               350, 127
               

               Conread position:
               13-413
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               349, 126
               

               Conread position:
               24-414
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 111
               

               Conread position:
               29-415
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 69
               

               Conread position:
               33-417
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               371, 31
               

               Conread position:
               39-417
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 53
               

               Conread position:
               39-417
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               324, 60
               

               Conread position:
               59-416
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 93
               

               Conread position:
               98-288
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 18
               

               Conread position:
               148-417
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               13, 81
               

               Conread position:
               169-415
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 119
               

               Conread position:
               169-417
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               173, 58
               

               Conread position:
               169-417
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               228, 123
               

               Conread position:
               169-417
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 140
               

               Conread position:
               172-372
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               192, 131
               

               Conread position:
               172-417
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               189, 86
               

               Conread position:
               172-417
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               192, 45
               

               Conread position:
               172-417
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 137
               

               Conread position:
               173-385
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               61, 143
               

               Conread position:
               173-399
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               191, 51
               

               Conread position:
               174-406
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               190, 113
               

               Conread position:
               174-417
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               114, 66
               

               Conread position:
               174-417
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 129
               

               Conread position:
               176-400
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               112, 60
               
Show alignments to all cow chromosomes.