Cow genome map
Conread name: | Pig1-132A16b |
Conread position: | 1-177 |
Cow position: | chr24:6524349-6524523 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 137 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 1-263 |
Cow position: | chr24:36721796-36722059 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 192 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 128, 163 |
Conread position: | 1-341 |
Cow position: | chr24:33937281-33937603 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 1-346 |
Cow position: | chr24:36710191-36710518 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-398 |
Cow position: | chr24:31356948-31357317 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 363, 44 |
Conread position: | 1-402 |
Cow position: | chr24:5863003-5862618 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 139 |
Conread position: | 1-402 |
Cow position: | chr24:31302046-31302421 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 363, 39 |
Conread position: | 1-402 |
Cow position: | chr24:38813996-38814378 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 146 |
Conread position: | 1-407 |
Cow position: | chr24:9071491-9071106 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 41 |
Conread position: | 1-414 |
Cow position: | chr24:18267134-18266742 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 361, 96 |
Conread position: | 1-417 |
Cow position: | chr24:13374163-13373754 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 139 |
Conread position: | 1-417 |
Cow position: | chr24:14760245-14760653 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 162 |
Conread position: | 1-417 |
Cow position: | chr24:32608663-32609062 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 144 |
Conread position: | 1-417 |
Cow position: | chr24:34760861-34761263 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 363, 144 |
Conread position: | 1-417 |
Cow position: | chr24:45086875-45087278 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 38 |
Conread position: | 1-418 |
Cow position: | chr24:5910171-5910573 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 131 |
Conread position: | 1-418 |
Cow position: | chr24:17566196-17566600 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 149 |
Conread position: | 2-370 |
Cow position: | chr24:36036474-36036117 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 329, 94 |
Conread position: | 2-379 |
Cow position: | chr24:15667395-15667040 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 362, 89 |
Conread position: | 4-154 |
Cow position: | chr24:17365619-17365474 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 117 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 4-417 |
Cow position: | chr24:12147232-12146836 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 357, 55 |
Conread position: | 6-154 |
Cow position: | chr24:25698301-25698443 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 6-286 |
Cow position: | chr24:14146812-14146547 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 200 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 146, 0 |
Conread position: | 6-341 |
Cow position: | chr24:16558923-16558615 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 240 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 6-350 |
Cow position: | chr24:18223124-18222795 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 6-369 |
Cow position: | chr24:36779628-36779964 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 358, 124 |
Conread position: | 6-395 |
Cow position: | chr24:35823848-35823477 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 158 |
Conread position: | 6-411 |
Cow position: | chr24:31067688-31067304 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 133 |
Conread position: | 6-415 |
Cow position: | chr24:20283855-20283460 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 150 |
Conread position: | 6-415 |
Cow position: | chr24:36028158-36027763 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 133 |
Conread position: | 6-417 |
Cow position: | chr24:3162827-3163224 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 133 |
Conread position: | 6-417 |
Cow position: | chr24:3793839-3794236 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 133 |
Conread position: | 6-417 |
Cow position: | chr24:3850952-3851349 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 133 |
Conread position: | 6-417 |
Cow position: | chr24:5929136-5929532 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 133 |
Conread position: | 6-417 |
Cow position: | chr24:5990830-5990434 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 133 |
Conread position: | 6-417 |
Cow position: | chr24:6067986-6067593 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 240, 84 |
Conread position: | 6-417 |
Cow position: | chr24:6326016-6325618 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 134 |
Conread position: | 6-417 |
Cow position: | chr24:6412835-6413232 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 358, 150 |
Conread position: | 6-417 |
Cow position: | chr24:11940118-11940515 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 358, 150 |
Conread position: | 6-417 |
Cow position: | chr24:12090337-12090729 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 133 |
Conread position: | 6-417 |
Cow position: | chr24:12332350-12331953 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 34 |
Conread position: | 6-417 |
Cow position: | chr24:12696766-12696370 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 98 |
Conread position: | 6-417 |
Cow position: | chr24:14250226-14249829 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 240, 38 |
Conread position: | 6-417 |
Cow position: | chr24:15296472-15296869 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 133 |
Conread position: | 6-417 |
Cow position: | chr24:16081130-16080731 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 150 |
Conread position: | 6-417 |
Cow position: | chr24:17161621-17161224 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 133 |
Conread position: | 6-417 |
Cow position: | chr24:17188917-17188519 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 283, 132 |
Conread position: | 6-417 |
Cow position: | chr24:18112812-18113209 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 133 |
Conread position: | 6-417 |
Cow position: | chr24:22047712-22047320 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 393, 133 |
Conread position: | 6-417 |
Cow position: | chr24:26412404-26412800 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 132 |
Conread position: | 6-417 |
Cow position: | chr24:29084309-29083911 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 135 |
Conread position: | 6-417 |
Cow position: | chr24:33640141-33639744 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 133 |
Conread position: | 6-417 |
Cow position: | chr24:36268448-36268052 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 84 |
Conread position: | 6-417 |
Cow position: | chr24:36307937-36308330 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 133 |
Conread position: | 6-417 |
Cow position: | chr24:39067512-39067114 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 134 |
Conread position: | 6-417 |
Cow position: | chr24:40467056-40466659 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 146 |
Conread position: | 6-417 |
Cow position: | chr24:41671215-41671606 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 291 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 242, 161 |
Conread position: | 6-425 |
Cow position: | chr24:22794916-22795318 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 42 |
Conread position: | 8-414 |
Cow position: | chr24:6442797-6443187 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 354, 131 |
Conread position: | 10-343 |
Cow position: | chr24:13191523-13191837 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 10-415 |
Cow position: | chr24:13235627-13236018 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 352, 93 |
Conread position: | 10-417 |
Cow position: | chr24:11081419-11081029 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 352, 129 |
Conread position: | 10-417 |
Cow position: | chr24:12446855-12447245 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 352, 129 |
Conread position: | 10-417 |
Cow position: | chr24:22975169-22975563 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 40 |
Conread position: | 10-417 |
Cow position: | chr24:23052526-23052133 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 354, 131 |
Conread position: | 14-415 |
Cow position: | chr24:10244194-10243810 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 350, 26 |
Conread position: | 18-154 |
Cow position: | chr24:9088750-9088615 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 110 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 11, 41 |
Conread position: | 19-417 |
Cow position: | chr24:6340073-6340457 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 345, 124 |
Conread position: | 29-415 |
Cow position: | chr24:32823742-32823382 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 331, 115 |
Conread position: | 30-402 |
Cow position: | chr24:12203136-12202781 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 259 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 11, 87 |
Conread position: | 34-417 |
Cow position: | chr24:12198971-12198602 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 330, 101 |
Conread position: | 57-397 |
Cow position: | chr24:15880546-15880865 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 241 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 305, 82 |
Conread position: | 69-414 |
Cow position: | chr24:31370868-31370542 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 295, 70 |
Conread position: | 88-418 |
Cow position: | chr24:33239440-33239128 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 57 |
Conread position: | 108-415 |
Cow position: | chr24:7749063-7749373 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 31 |
Conread position: | 154-417 |
Cow position: | chr24:12293181-12293446 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 155 |
Conread position: | 164-417 |
Cow position: | chr24:34270691-34270942 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 194 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 198, 145 |
Conread position: | 167-418 |
Cow position: | chr24:19466758-19466506 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 126 |
Conread position: | 169-400 |
Cow position: | chr24:28601535-28601311 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 171 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 169-417 |
Cow position: | chr24:11748605-11748356 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 85 |
Conread position: | 169-418 |
Cow position: | chr24:33229833-33230092 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 193 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 54, 151 |
Conread position: | 170-415 |
Cow position: | chr24:11839359-11839606 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 191 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 67, 120 |
Conread position: | 173-370 |
Cow position: | chr24:26388401-26388204 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 151 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 189, 136 |
Conread position: | 173-414 |
Cow position: | chr24:40129142-40129394 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 187 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 191, 44 |
Conread position: | 174-399 |
Cow position: | chr24:29155271-29155481 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 171 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 190, 57 |
Conread position: | 174-417 |
Cow position: | chr24:17720911-17720666 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 127 |
Conread position: | 174-417 |
Cow position: | chr24:19706747-19706987 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 188 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 78, 61 |
Show alignments to all cow chromosomes.