Cow genome map
| Conread name: | Pig1-132A16b |
| Conread position: | 1-177 |
| Cow position: | chr27:13316819-13316999 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 1-249 |
| Cow position: | chr27:14380564-14380795 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-346 |
| Cow position: | chr27:2681780-2682110 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 144 |
| Conread position: | 1-415 |
| Cow position: | chr27:344670-344271 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 138 |
| Conread position: | 1-417 |
| Cow position: | chr27:10383701-10384092 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 1-417 |
| Cow position: | chr27:15272810-15272415 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 95 |
| Conread position: | 1-417 |
| Cow position: | chr27:21451703-21452106 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 147 |
| Conread position: | 1-417 |
| Cow position: | chr27:26785078-26785473 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 25 |
| Conread position: | 1-417 |
| Cow position: | chr27:27729227-27728832 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 237, 63 |
| Conread position: | 1-418 |
| Cow position: | chr27:30677821-30677426 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 361, 107 |
| Conread position: | 1-420 |
| Cow position: | chr27:11434435-11434827 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 79 |
| Conread position: | 2-371 |
| Cow position: | chr27:27557063-27557411 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 52 |
| Conread position: | 2-417 |
| Cow position: | chr27:2557728-2557332 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 44 |
| Conread position: | 2-417 |
| Cow position: | chr27:4331479-4331077 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 154 |
| Conread position: | 2-453 |
| Cow position: | chr27:15867036-15866606 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 42 |
| Conread position: | 3-362 |
| Cow position: | chr27:27930468-27930805 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 136, 39 |
| Conread position: | 4-94 |
| Cow position: | chr27:24054968-24055059 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 4-417 |
| Cow position: | chr27:5990787-5990390 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 140 |
| Conread position: | 5-417 |
| Cow position: | chr27:11256422-11256024 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 143 |
| Conread position: | 6-154 |
| Cow position: | chr27:526200-526348 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-249 |
| Cow position: | chr27:29467195-29467420 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 6-339 |
| Cow position: | chr27:12239333-12239648 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 6-360 |
| Cow position: | chr27:1188933-1189258 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 6-376 |
| Cow position: | chr27:5983765-5983413 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 132 |
| Conread position: | 6-402 |
| Cow position: | chr27:8427123-8427502 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 127 |
| Conread position: | 6-417 |
| Cow position: | chr27:165654-165259 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 391, 133 |
| Conread position: | 6-417 |
| Cow position: | chr27:2331768-2332162 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 150 |
| Conread position: | 6-417 |
| Cow position: | chr27:3653435-3653038 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr27:8972709-8973107 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 150 |
| Conread position: | 6-417 |
| Cow position: | chr27:13353571-13353967 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr27:13901389-13901785 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 133 |
| Conread position: | 6-417 |
| Cow position: | chr27:14297472-14297867 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 124 |
| Conread position: | 6-417 |
| Cow position: | chr27:16031132-16030736 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 149 |
| Conread position: | 6-417 |
| Cow position: | chr27:20810681-20811078 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 150 |
| Conread position: | 6-417 |
| Cow position: | chr27:26330197-26330589 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 150 |
| Conread position: | 6-418 |
| Cow position: | chr27:1081897-1081514 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 393, 71 |
| Conread position: | 6-418 |
| Cow position: | chr27:5925538-5925939 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 232, 33 |
| Conread position: | 6-418 |
| Cow position: | chr27:8959751-8959354 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 150 |
| Conread position: | 6-418 |
| Cow position: | chr27:11481196-11481594 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 133 |
| Conread position: | 7-417 |
| Cow position: | chr27:25800941-25800549 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 45 |
| Conread position: | 10-415 |
| Cow position: | chr27:8201204-8201596 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 146 |
| Conread position: | 10-417 |
| Cow position: | chr27:15033622-15033230 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 129 |
| Conread position: | 12-417 |
| Cow position: | chr27:27291664-27292055 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 144 |
| Conread position: | 22-417 |
| Cow position: | chr27:13409273-13409658 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 126 |
| Conread position: | 29-415 |
| Cow position: | chr27:11489909-11490280 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 76 |
| Conread position: | 29-417 |
| Cow position: | chr27:19300278-19299904 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 110 |
| Conread position: | 32-400 |
| Cow position: | chr27:13182993-13182648 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 53 |
| Conread position: | 41-418 |
| Cow position: | chr27:26856338-26856703 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 43-417 |
| Cow position: | chr27:8262140-8262501 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 60 |
| Conread position: | 47-415 |
| Cow position: | chr27:10324620-10324275 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 62 |
| Conread position: | 72-417 |
| Cow position: | chr27:28907898-28907573 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 67 |
| Conread position: | 159-418 |
| Cow position: | chr27:30177112-30176850 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 75 |
| Conread position: | 169-340 |
| Cow position: | chr27:13844301-13844131 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 169-341 |
| Cow position: | chr27:11414136-11413973 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 169-417 |
| Cow position: | chr27:16823560-16823314 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 65, 131 |
| Conread position: | 169-417 |
| Cow position: | chr27:20001404-20001154 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 140 |
| Conread position: | 169-417 |
| Cow position: | chr27:22400539-22400287 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 144 |
| Conread position: | 173-354 |
| Cow position: | chr27:13316971-13317151 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 173-417 |
| Cow position: | chr27:16045145-16045392 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 136 |
| Conread position: | 174-351 |
| Cow position: | chr27:7084851-7084675 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 174-420 |
| Cow position: | chr27:26849284-26849039 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 143, 50 |
| Conread position: | 179-417 |
| Cow position: | chr27:5853169-5853408 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 185, 130 |
Show alignments to all cow chromosomes.