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Cow genome map

           
Conread name:
           
Pig1-132A16b
        

               
Conread position:
               
1-91
               

               
Cow position:
               
chr3:36571331-36571418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-111
               

               
Cow position:
               
chr3:44101243-44101353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr3:79595824-79595971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr3:21005002-21005161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:25056878-25057104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
224, 28
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr3:19794901-19794637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr3:18886648-18886970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr3:20999881-20999558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr3:33326577-33326896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
115, 98
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr3:24572976-24572654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 138
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr3:13723521-13723196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr3:17460413-17460735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 32
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr3:14724310-14724647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 76
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr3:6854436-6854041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 195
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr3:33254671-33254297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 162
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr3:3552513-3552879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr3:61677726-61678104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 107
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr3:35884930-35884547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 155
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr3:72390109-72390507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 75
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr3:15656121-15655726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
299, 26
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr3:23217135-23216743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 67
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr3:45880933-45881321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 48
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr3:49463369-49462979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 118
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr3:2852050-2851645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 36
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr3:7245915-7245516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 138
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr3:22235311-22234899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 163
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr3:25689844-25690219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
363, 59
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr3:37599925-37600324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 108
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr3:41057153-41057552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 57
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr3:44536797-44536383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 142
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr3:45977690-45978092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 155
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr3:46505959-46506361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 155
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr3:58950652-58951050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
402, 113
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr3:60932456-60932857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 113
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr3:61538796-61539192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 61
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr3:74391715-74391317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 57
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr3:76136509-76136914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 150
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr3:31422936-31422532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 143
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr3:35056168-35056566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 75
               

               
Conread position:
               
2-149
               

               
Cow position:
               
chr3:13117864-13117723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
2-163
               

               
Cow position:
               
chr3:2790943-2791104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr3:7856613-7856935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr3:5951424-5951063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 40
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr3:45184795-45184411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 128
               

               
Conread position:
               
2-416
               

               
Cow position:
               
chr3:66977852-66978256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 120
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr3:2904257-2903873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr3:7155615-7155214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 156
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr3:31418725-31419119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 148
               

               
Conread position:
               
2-418
               

               
Cow position:
               
chr3:12667894-12668289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
2-418
               

               
Cow position:
               
chr3:23010543-23010945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
2-494
               

               
Cow position:
               
chr3:173696-174165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr3:16293723-16293348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 25
               

               
Conread position:
               
4-154
               

               
Cow position:
               
chr3:54876857-54877007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-354
               

               
Cow position:
               
chr3:72669366-72669035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
4-414
               

               
Cow position:
               
chr3:75997695-75997304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 152
               

               
Conread position:
               
4-415
               

               
Cow position:
               
chr3:2507447-2507052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 110
               

               
Conread position:
               
4-417
               

               
Cow position:
               
chr3:4039737-4039343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 35
               

               
Conread position:
               
4-417
               

               
Cow position:
               
chr3:73763437-73763044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 34
               

               
Conread position:
               
4-417
               

               
Cow position:
               
chr3:76000768-76000368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 52
               

               
Conread position:
               
6-154
               

               
Cow position:
               
chr3:2432457-2432311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
6-154
               

               
Cow position:
               
chr3:6864854-6865002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-154
               

               
Cow position:
               
chr3:19942087-19942234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
6-154
               

               
Cow position:
               
chr3:22724576-22724427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
100, 71
               

               
Conread position:
               
6-154
               

               
Cow position:
               
chr3:32490517-32490369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-154
               

               
Cow position:
               
chr3:77472793-77472645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-177
               

               
Cow position:
               
chr3:33269422-33269589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
6-177
               

               
Cow position:
               
chr3:53518999-53519169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr3:31396567-31396817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
6-286
               

               
Cow position:
               
chr3:11384512-11384770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
269, 40
               

               
Conread position:
               
6-286
               

               
Cow position:
               
chr3:68043309-68043045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
227, 66
               

               
Conread position:
               
6-289
               

               
Cow position:
               
chr3:49931031-49931299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
276, 157
               

               
Conread position:
               
6-329
               

               
Cow position:
               
chr3:30351471-30351777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr3:35619748-35620074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr3:40826592-40826910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr3:81101274-81101592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr3:29130290-29130608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr3:49999332-49999655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 38
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr3:72175110-72174761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr3:18814702-18815068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 38
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr3:2365706-2365350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
356, 57
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr3:40336950-40336579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-402
               

               
Cow position:
               
chr3:12750095-12750471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 52
               

               
Conread position:
               
6-402
               

               
Cow position:
               
chr3:64376515-64376144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 78
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr3:13035300-13034905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 157
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr3:30321452-30321835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 150
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr3:37972230-37972617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 58
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr3:45675582-45675187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 157
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr3:47272683-47272288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 133
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr3:49605246-49604856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 150
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr3:50921235-50921617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 66
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr3:66888002-66887602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:579370-579765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 43
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:2074976-2075373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:2117642-2118045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 112
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:2866459-2866062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:4135786-4135387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:5474735-5475132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:6785513-6785906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 108
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:6838225-6838625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:10243855-10244252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 150
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:11784559-11784943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 85
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:12797866-12797469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:13276086-13275685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 154
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:14613228-14613608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 86
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:14680283-14680674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:14922848-14923244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:16226071-16226467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 38
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:16620560-16620161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:19753539-19753143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 150
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:19958790-19959187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:20475703-20476091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:23204482-23204086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 151
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:24432577-24432969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 150
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:24442907-24442514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 150
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:30615745-30615351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:31021878-31022267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 38
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:35109422-35109819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:36121371-36121768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:36874865-36874469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:38869762-38870158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 150
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:39921750-39921355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:40520744-40520347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:41207370-41206973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:42508013-42507621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 43
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:42846540-42846936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 148
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:43190074-43189673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 129
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:44927009-44927406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 101
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:46753042-46753433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:47078417-47078020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:48603448-48603853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 124
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:49416651-49416258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 150
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:49564212-49564609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:49907837-49907442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:50204761-50205165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 38
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:53880071-53879673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:56297580-56297977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:59118583-59118186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:59864675-59865072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 132
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:65085130-65085526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 74
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:65473625-65474020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 133
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:66829743-66829358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 90
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:66968683-66968286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 33
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:68500655-68501050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 150
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:68889376-68888980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 74
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:69930640-69930244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 85
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:72633269-72633665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 107
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:73451118-73450720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 150
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:75038646-75038249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 150
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:78024240-78023855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 149
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr3:79668306-79668703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 132
               

               
Conread position:
               
6-418
               

               
Cow position:
               
chr3:6442264-6442660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 133
               

               
Conread position:
               
6-418
               

               
Cow position:
               
chr3:14864078-14864474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 132
               

               
Conread position:
               
6-420
               

               
Cow position:
               
chr3:26722616-26722224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
6-427
               

               
Cow position:
               
chr3:47986635-47987041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 133
               

               
Conread position:
               
7-417
               

               
Cow position:
               
chr3:64293722-64294102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 85
               

               
Conread position:
               
9-417
               

               
Cow position:
               
chr3:58336505-58336899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 147
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr3:5887085-5887474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 106
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr3:16156723-16157109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 103
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr3:17864628-17865021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 147
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr3:35612346-35612739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 129
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr3:42186669-42187061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 125
               

               
Conread position:
               
10-417
               

               
Cow position:
               
chr3:49542008-49541616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 121
               

               
Conread position:
               
11-417
               

               
Cow position:
               
chr3:35918761-35919152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 22
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr3:14438788-14438396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
15-413
               

               
Cow position:
               
chr3:75479067-75479442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
272, 61
               

               
Conread position:
               
15-415
               

               
Cow position:
               
chr3:21082077-21082451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 53
               

               
Conread position:
               
16-417
               

               
Cow position:
               
chr3:302426-302814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 124
               

               
Conread position:
               
17-415
               

               
Cow position:
               
chr3:22220347-22220730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 128
               

               
Conread position:
               
18-417
               

               
Cow position:
               
chr3:22918731-22919113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 8
               

               
Conread position:
               
19-417
               

               
Cow position:
               
chr3:48528235-48528617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 25
               

               
Conread position:
               
22-417
               

               
Cow position:
               
chr3:3031444-3031823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 27
               

               
Conread position:
               
22-417
               

               
Cow position:
               
chr3:51256149-51256531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 117
               

               
Conread position:
               
24-415
               

               
Cow position:
               
chr3:3884979-3884605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
25-417
               

               
Cow position:
               
chr3:65178586-65178964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 89
               

               
Conread position:
               
27-341
               

               
Cow position:
               
chr3:3653077-3652793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
29-379
               

               
Cow position:
               
chr3:18184133-18184465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 74
               

               
Conread position:
               
29-402
               

               
Cow position:
               
chr3:67745563-67745204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
30-417
               

               
Cow position:
               
chr3:56697062-56697430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 19
               

               
Conread position:
               
32-402
               

               
Cow position:
               
chr3:80564017-80564373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
34-415
               

               
Cow position:
               
chr3:19797879-19797513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 21
               

               
Conread position:
               
36-393
               

               
Cow position:
               
chr3:40004272-40003944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 39
               

               
Conread position:
               
40-327
               

               
Cow position:
               
chr3:60891491-60891763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
40-418
               

               
Cow position:
               
chr3:16332650-16333014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 83
               

               
Conread position:
               
42-415
               

               
Cow position:
               
chr3:57456176-57456539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 102
               

               
Conread position:
               
45-415
               

               
Cow position:
               
chr3:16005575-16005209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 68
               

               
Conread position:
               
45-417
               

               
Cow position:
               
chr3:51235267-51234912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 94
               

               
Conread position:
               
46-417
               

               
Cow position:
               
chr3:11018688-11019037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 46
               

               
Conread position:
               
49-417
               

               
Cow position:
               
chr3:45947286-45946933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 81
               

               
Conread position:
               
51-418
               

               
Cow position:
               
chr3:37020975-37020630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 88
               

               
Conread position:
               
58-414
               

               
Cow position:
               
chr3:77366459-77366122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 86
               

               
Conread position:
               
59-417
               

               
Cow position:
               
chr3:63276274-63275937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
305, 55
               

               
Conread position:
               
60-415
               

               
Cow position:
               
chr3:21303339-21303005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
64-417
               

               
Cow position:
               
chr3:9665699-9665360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 84
               

               
Conread position:
               
68-338
               

               
Cow position:
               
chr3:11334604-11334353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
177, 41
               

               
Conread position:
               
68-338
               

               
Cow position:
               
chr3:11446694-11446953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
177, 41
               

               
Conread position:
               
69-417
               

               
Cow position:
               
chr3:3372926-3372594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 70
               

               
Conread position:
               
74-417
               

               
Cow position:
               
chr3:24886850-24887178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 65
               

               
Conread position:
               
79-334
               

               
Cow position:
               
chr3:73765380-73765142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
175, 65
               

               
Conread position:
               
108-394
               

               
Cow position:
               
chr3:49121270-49120985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
123-462
               

               
Cow position:
               
chr3:36571141-36570792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 247
               

               
Conread position:
               
133-402
               

               
Cow position:
               
chr3:83762034-83761764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 178
               

               
Conread position:
               
148-415
               

               
Cow position:
               
chr3:38346356-38346627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
14, 89
               

               
Conread position:
               
148-417
               

               
Cow position:
               
chr3:1034410-1034680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 118
               

               
Conread position:
               
166-417
               

               
Cow position:
               
chr3:53934650-53934887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
231, 92
               

               
Conread position:
               
168-417
               

               
Cow position:
               
chr3:61242724-61242971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 126
               

               
Conread position:
               
169-341
               

               
Cow position:
               
chr3:55187762-55187935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
81, 127
               

               
Conread position:
               
169-402
               

               
Cow position:
               
chr3:67021659-67021437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
169-402
               

               
Cow position:
               
chr3:75158006-75157785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
195, 67
               

               
Conread position:
               
169-415
               

               
Cow position:
               
chr3:3837263-3837017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
195, 12
               

               
Conread position:
               
169-415
               

               
Cow position:
               
chr3:13085198-13084951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
133, 69
               

               
Conread position:
               
169-415
               

               
Cow position:
               
chr3:78200936-78200685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 129
               

               
Conread position:
               
169-417
               

               
Cow position:
               
chr3:18246240-18245991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 76
               

               
Conread position:
               
169-417
               

               
Cow position:
               
chr3:23735930-23735678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
169-417
               

               
Cow position:
               
chr3:77187628-77187874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
195, 9
               

               
Conread position:
               
169-418
               

               
Cow position:
               
chr3:58034324-58034075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 61
               

               
Conread position:
               
170-318
               

               
Cow position:
               
chr3:6874735-6874585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 142
               

               
Conread position:
               
171-402
               

               
Cow position:
               
chr3:55108055-55107827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 74
               

               
Conread position:
               
172-370
               

               
Cow position:
               
chr3:54959078-54959276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
192, 131
               

               
Conread position:
               
172-407
               

               
Cow position:
               
chr3:19028106-19027871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
90, 82
               

               
Conread position:
               
173-417
               

               
Cow position:
               
chr3:6714421-6714667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
189, 136
               

               
Conread position:
               
173-417
               

               
Cow position:
               
chr3:45097586-45097832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 136
               

               
Conread position:
               
174-358
               

               
Cow position:
               
chr3:21005205-21005388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
174-415
               

               
Cow position:
               
chr3:49649565-49649804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
190, 129
               

               
Conread position:
               
174-417
               

               
Cow position:
               
chr3:19942231-19942475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 10
               

               
Conread position:
               
174-417
               

               
Cow position:
               
chr3:43529054-43528809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 129
               

               
Conread position:
               
174-418
               

               
Cow position:
               
chr3:49610863-49610622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
225, 135
               

               
Conread position:
               
175-417
               

               
Cow position:
               
chr3:18875333-18875090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
187, 71
               

               
Conread position:
               
181-415
               

               
Cow position:
               
chr3:29311498-29311728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
183, 128
               
Show alignments to all cow chromosomes.