Cow genome map
| Conread name: | Pig1-132A16b |
| Conread position: | 1-111 |
| Cow position: | chr6:58016584-58016694 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-128 |
| Cow position: | chr6:25357626-25357505 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-130 |
| Cow position: | chr6:65860609-65860738 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-137 |
| Cow position: | chr6:12099746-12099875 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-154 |
| Cow position: | chr6:16766605-16766454 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1-154 |
| Cow position: | chr6:45736633-45736480 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-154 |
| Cow position: | chr6:46633354-46633506 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-154 |
| Cow position: | chr6:58605763-58605915 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 149, 39 |
| Conread position: | 1-171 |
| Cow position: | chr6:17556438-17556269 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 1-178 |
| Cow position: | chr6:6182478-6182306 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 150, 33 |
| Conread position: | 1-216 |
| Cow position: | chr6:1109243-1109442 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 1-285 |
| Cow position: | chr6:7105297-7105027 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 253, 121 |
| Conread position: | 1-321 |
| Cow position: | chr6:21588219-21588520 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 1-331 |
| Cow position: | chr6:57383651-57383966 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 172, 129 |
| Conread position: | 1-341 |
| Cow position: | chr6:11638971-11638650 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 1-341 |
| Cow position: | chr6:53935399-53935046 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 267 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 150, 33 |
| Conread position: | 1-402 |
| Cow position: | chr6:5096570-5096215 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 44 |
| Conread position: | 1-402 |
| Cow position: | chr6:39136739-39137110 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 108 |
| Conread position: | 1-413 |
| Cow position: | chr6:11193352-11192947 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 37 |
| Conread position: | 1-414 |
| Cow position: | chr6:706233-706629 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 398, 162 |
| Conread position: | 1-415 |
| Cow position: | chr6:33300900-33301304 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 147 |
| Conread position: | 1-415 |
| Cow position: | chr6:43797666-43797264 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 155 |
| Conread position: | 1-415 |
| Cow position: | chr6:51674007-51674401 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 57 |
| Conread position: | 1-415 |
| Cow position: | chr6:53672568-53672977 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 141 |
| Conread position: | 1-417 |
| Cow position: | chr6:3152453-3152849 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 38 |
| Conread position: | 1-417 |
| Cow position: | chr6:4467858-4468251 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 143 |
| Conread position: | 1-417 |
| Cow position: | chr6:6471700-6471282 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 67 |
| Conread position: | 1-417 |
| Cow position: | chr6:9738019-9737627 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 106 |
| Conread position: | 1-417 |
| Cow position: | chr6:12352076-12352477 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 76 |
| Conread position: | 1-417 |
| Cow position: | chr6:15276005-15275603 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 155 |
| Conread position: | 1-417 |
| Cow position: | chr6:16410291-16410691 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 17 |
| Conread position: | 1-417 |
| Cow position: | chr6:21832426-21832024 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 139 |
| Conread position: | 1-417 |
| Cow position: | chr6:34075102-34075507 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 115 |
| Conread position: | 1-418 |
| Cow position: | chr6:6119754-6119367 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 1-420 |
| Cow position: | chr6:17344433-17344835 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 149 |
| Conread position: | 1-425 |
| Cow position: | chr6:10694957-10695360 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 402, 113 |
| Conread position: | 2-149 |
| Cow position: | chr6:59619311-59619459 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 2-178 |
| Cow position: | chr6:1274611-1274434 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 94, 38 |
| Conread position: | 2-341 |
| Cow position: | chr6:28102633-28102314 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 112 |
| Conread position: | 2-394 |
| Cow position: | chr6:10681226-10681594 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 37 |
| Conread position: | 2-417 |
| Cow position: | chr6:46764170-46763769 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 137 |
| Conread position: | 3-146 |
| Cow position: | chr6:14851510-14851370 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 3-150 |
| Cow position: | chr6:28481565-28481712 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-154 |
| Cow position: | chr6:30269665-30269514 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-417 |
| Cow position: | chr6:51876997-51877392 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 40 |
| Conread position: | 4-339 |
| Cow position: | chr6:43187347-43187669 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 159 |
| Conread position: | 4-417 |
| Cow position: | chr6:12926812-12927205 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 48 |
| Conread position: | 4-418 |
| Cow position: | chr6:5946537-5946137 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 159 |
| Conread position: | 5-417 |
| Cow position: | chr6:62333510-62333113 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 134 |
| Conread position: | 6-134 |
| Cow position: | chr6:24126357-24126228 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 36, 126 |
| Conread position: | 6-136 |
| Cow position: | chr6:68030419-68030549 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-172 |
| Cow position: | chr6:2111159-2110995 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 6-177 |
| Cow position: | chr6:27526723-27526556 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 6-178 |
| Cow position: | chr6:12663075-12662902 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 6-178 |
| Cow position: | chr6:46225722-46225545 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 6-252 |
| Cow position: | chr6:32664862-32664631 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 221, 133 |
| Conread position: | 6-299 |
| Cow position: | chr6:50485544-50485251 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-321 |
| Cow position: | chr6:55593310-55593608 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 6-341 |
| Cow position: | chr6:1536945-1537252 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 6-341 |
| Cow position: | chr6:56925973-56926291 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 6-341 |
| Cow position: | chr6:60332583-60332903 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 151 |
| Conread position: | 6-341 |
| Cow position: | chr6:64719558-64719873 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 6-346 |
| Cow position: | chr6:41231728-41232045 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 241 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 6-410 |
| Cow position: | chr6:2186542-2186152 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 133 |
| Conread position: | 6-413 |
| Cow position: | chr6:53543243-53542852 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-414 |
| Cow position: | chr6:16050053-16049662 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 148 |
| Conread position: | 6-414 |
| Cow position: | chr6:26324960-26324566 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-414 |
| Cow position: | chr6:45666690-45666304 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 144 |
| Conread position: | 6-415 |
| Cow position: | chr6:328123-327728 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 134 |
| Conread position: | 6-415 |
| Cow position: | chr6:1796865-1797260 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 133 |
| Conread position: | 6-415 |
| Cow position: | chr6:24242527-24242921 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 133 |
| Conread position: | 6-415 |
| Cow position: | chr6:39912562-39912957 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-415 |
| Cow position: | chr6:51733321-51733716 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 150 |
| Conread position: | 6-415 |
| Cow position: | chr6:55539031-55538640 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 129 |
| Conread position: | 6-415 |
| Cow position: | chr6:58031017-58031406 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 150 |
| Conread position: | 6-416 |
| Cow position: | chr6:17049613-17050010 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 150 |
| Conread position: | 6-417 |
| Cow position: | chr6:478790-479183 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 158 |
| Conread position: | 6-417 |
| Cow position: | chr6:2875794-2875399 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 133 |
| Conread position: | 6-417 |
| Cow position: | chr6:3485179-3484783 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 150 |
| Conread position: | 6-417 |
| Cow position: | chr6:3886265-3885870 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 150 |
| Conread position: | 6-417 |
| Cow position: | chr6:7467410-7467014 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 58 |
| Conread position: | 6-417 |
| Cow position: | chr6:11389374-11388977 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr6:11869694-11869299 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 108 |
| Conread position: | 6-417 |
| Cow position: | chr6:12997661-12998053 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 45 |
| Conread position: | 6-417 |
| Cow position: | chr6:14928699-14929081 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 62 |
| Conread position: | 6-417 |
| Cow position: | chr6:15137933-15137536 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 150 |
| Conread position: | 6-417 |
| Cow position: | chr6:16593190-16593585 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 90 |
| Conread position: | 6-417 |
| Cow position: | chr6:18803819-18803422 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 158 |
| Conread position: | 6-417 |
| Cow position: | chr6:19103668-19103271 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr6:20451200-20451595 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 85 |
| Conread position: | 6-417 |
| Cow position: | chr6:22043768-22043373 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 32 |
| Conread position: | 6-417 |
| Cow position: | chr6:23568353-23567971 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 129 |
| Conread position: | 6-417 |
| Cow position: | chr6:26667784-26667388 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 129 |
| Conread position: | 6-417 |
| Cow position: | chr6:28001156-28000759 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr6:28065231-28065626 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 32 |
| Conread position: | 6-417 |
| Cow position: | chr6:34405541-34405964 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 313 |
| Conread position: | 6-417 |
| Cow position: | chr6:34504281-34503887 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 150 |
| Conread position: | 6-417 |
| Cow position: | chr6:34843473-34843054 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 157 |
| Conread position: | 6-417 |
| Cow position: | chr6:35873489-35873098 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 105 |
| Conread position: | 6-417 |
| Cow position: | chr6:36531514-36531912 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 133 |
| Conread position: | 6-417 |
| Cow position: | chr6:37387806-37388203 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr6:44017588-44017191 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 133 |
| Conread position: | 6-417 |
| Cow position: | chr6:44146707-44146314 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 117 |
| Conread position: | 6-417 |
| Cow position: | chr6:47039970-47039574 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 107 |
| Conread position: | 6-417 |
| Cow position: | chr6:50571431-50571828 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 150 |
| Conread position: | 6-417 |
| Cow position: | chr6:51150182-51150579 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 6-417 |
| Cow position: | chr6:55903329-55903726 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 157 |
| Conread position: | 6-417 |
| Cow position: | chr6:60876536-60876932 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 128 |
| Conread position: | 6-417 |
| Cow position: | chr6:62665015-62665412 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 133 |
| Conread position: | 7-374 |
| Cow position: | chr6:25408448-25408112 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 36 |
| Conread position: | 7-382 |
| Cow position: | chr6:27475647-27476015 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 127 |
| Conread position: | 8-417 |
| Cow position: | chr6:40813609-40813998 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 55 |
| Conread position: | 10-346 |
| Cow position: | chr6:48873080-48872764 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 10-417 |
| Cow position: | chr6:1245677-1245284 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 129 |
| Conread position: | 10-417 |
| Cow position: | chr6:7448739-7449132 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 129 |
| Conread position: | 10-417 |
| Cow position: | chr6:19059522-19059910 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 57 |
| Conread position: | 10-417 |
| Cow position: | chr6:27094343-27093950 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 129 |
| Conread position: | 10-417 |
| Cow position: | chr6:43790124-43789731 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 129 |
| Conread position: | 10-417 |
| Cow position: | chr6:55238934-55239327 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 128 |
| Conread position: | 10-417 |
| Cow position: | chr6:67553476-67553869 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 129 |
| Conread position: | 11-417 |
| Cow position: | chr6:8205432-8205824 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 145 |
| Conread position: | 11-417 |
| Cow position: | chr6:10266882-10266495 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 134 |
| Conread position: | 11-417 |
| Cow position: | chr6:33466203-33466592 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 61 |
| Conread position: | 19-417 |
| Cow position: | chr6:33922152-33921764 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 101 |
| Conread position: | 23-417 |
| Cow position: | chr6:19712988-19712608 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 116 |
| Conread position: | 24-317 |
| Cow position: | chr6:32018857-32018570 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 48, 80 |
| Conread position: | 28-417 |
| Cow position: | chr6:27173102-27173478 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 112 |
| Conread position: | 38-418 |
| Cow position: | chr6:14199317-14199679 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 107 |
| Conread position: | 39-408 |
| Cow position: | chr6:39092890-39093245 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 100 |
| Conread position: | 40-417 |
| Cow position: | chr6:6613570-6613928 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 115 |
| Conread position: | 41-417 |
| Cow position: | chr6:47539654-47540011 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 98 |
| Conread position: | 44-417 |
| Cow position: | chr6:8535516-8535162 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 52 |
| Conread position: | 48-415 |
| Cow position: | chr6:2606747-2607089 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 59 |
| Conread position: | 50-418 |
| Cow position: | chr6:58915052-58914703 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 314, 89 |
| Conread position: | 72-346 |
| Cow position: | chr6:49442248-49442507 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 189, 60 |
| Conread position: | 74-341 |
| Cow position: | chr6:67213684-67213932 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 148-418 |
| Cow position: | chr6:55169836-55170108 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 164 |
| Conread position: | 153-402 |
| Cow position: | chr6:16737247-16737492 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 15 |
| Conread position: | 163-417 |
| Cow position: | chr6:49579487-49579734 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 229, 146 |
| Conread position: | 169-356 |
| Cow position: | chr6:52498097-52498283 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 169-381 |
| Cow position: | chr6:32271822-32271612 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 195, 71 |
| Conread position: | 169-417 |
| Cow position: | chr6:24988428-24988678 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 140 |
| Conread position: | 169-417 |
| Cow position: | chr6:28487274-28487024 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 190, 140 |
| Conread position: | 169-417 |
| Cow position: | chr6:28701179-28700928 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 77, 141 |
| Conread position: | 169-417 |
| Cow position: | chr6:43049399-43049648 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 193, 140 |
| Conread position: | 169-420 |
| Cow position: | chr6:47977320-47977571 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 122 |
| Conread position: | 173-341 |
| Cow position: | chr6:55041777-55041613 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 173-418 |
| Cow position: | chr6:1175535-1175301 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 226, 38 |
| Conread position: | 174-393 |
| Cow position: | chr6:18969786-18969581 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 190, 43 |
| Conread position: | 174-402 |
| Cow position: | chr6:40319646-40319879 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 13, 141 |
| Conread position: | 174-415 |
| Cow position: | chr6:32125337-32125583 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 13, 81 |
| Conread position: | 174-417 |
| Cow position: | chr6:48568099-48567855 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 106, 114 |
| Conread position: | 175-341 |
| Cow position: | chr6:39997692-39997527 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 176-415 |
| Cow position: | chr6:32211374-32211137 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 111 |
| Conread position: | 176-415 |
| Cow position: | chr6:54429077-54429322 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 94, 69 |
| Conread position: | 177-286 |
| Cow position: | chr6:22333200-22333089 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 177-415 |
| Cow position: | chr6:6200725-6200964 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 47 |
| Conread position: | 179-402 |
| Cow position: | chr6:227553-227773 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 185, 47 |
| Conread position: | 180-418 |
| Cow position: | chr6:13740953-13741186 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 67, 46 |
Show alignments to all cow chromosomes.