Cow genome map

Conread name: Pig1-132A16b

Conread position: 1-136
Cow position:
Alignm length: 136
Alignm identity: 114
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 1-154
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 102, 116

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 1-285
Cow position:
Alignm length: 291
Alignm identity: 214
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 44, 155

Conread position: 1-286
Cow position:
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 1-303
Cow position:
Alignm length: 303
Alignm identity: 214
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 143, 0

Conread position: 1-338
Cow position:
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 162

Conread position: 1-369
Cow position:
Alignm length: 370
Alignm identity: 255
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 361, 111

Conread position: 1-394
Cow position:
Alignm length: 395
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 107

Conread position: 1-406
Cow position:
Alignm length: 406
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 1-406
Cow position:
Alignm length: 407
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 126

Conread position: 1-414
Cow position:
Alignm length: 418
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 148

Conread position: 1-415
Cow position:
Alignm length: 420
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 107

Conread position: 1-415
Cow position:
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 162

Conread position: 1-415
Cow position:
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 38

Conread position: 1-415
Cow position:
Alignm length: 425
Alignm identity: 296
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 276, 149

Conread position: 1-415
Cow position:
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 302

Conread position: 1-415
Cow position:
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 162

Conread position: 1-417
Cow position:
Alignm length: 421
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 147

Conread position: 1-417
Cow position:
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 144

Conread position: 1-417
Cow position:
Alignm length: 421
Alignm identity: 284
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 361, 102

Conread position: 1-417
Cow position:
Alignm length: 425
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 57

Conread position: 1-417
Cow position:
Alignm length: 422
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 44

Conread position: 1-417
Cow position:
Alignm length: 423
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 145

Conread position: 1-417
Cow position:
Alignm length: 420
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 95

Conread position: 1-417
Cow position:
Alignm length: 424
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 62

Conread position: 1-418
Cow position:
Alignm length: 431
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 168

Conread position: 1-418
Cow position:
Alignm length: 422
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 62

Conread position: 1-421
Cow position:
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 149

Conread position: 1-425
Cow position:
Alignm length: 431
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 44

Conread position: 1-468
Cow position:
Alignm length: 472
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 138

Conread position: 2-402
Cow position:
Alignm length: 403
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 59

Conread position: 2-417
Cow position:
Alignm length: 420
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 47

Conread position: 2-417
Cow position:
Alignm length: 420
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 137

Conread position: 3-336
Cow position:
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 47

Conread position: 4-395
Cow position:
Alignm length: 398
Alignm identity: 278
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 214, 29

Conread position: 4-402
Cow position:
Alignm length: 400
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 22

Conread position: 4-415
Cow position:
Alignm length: 416
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 68

Conread position: 4-417
Cow position:
Alignm length: 419
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 75

Conread position: 6-94
Cow position:
Alignm length: 89
Alignm identity: 80
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 6-154
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 6-317
Cow position:
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 134

Conread position: 6-332
Cow position:
Alignm length: 327
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 6-341
Cow position:
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 6-341
Cow position:
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 6-346
Cow position:
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 6-360
Cow position:
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 6-373
Cow position:
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 66

Conread position: 6-400
Cow position:
Alignm length: 411
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 87

Conread position: 6-406
Cow position:
Alignm length: 406
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 6-410
Cow position:
Alignm length: 409
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 132

Conread position: 6-412
Cow position:
Alignm length: 412
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 151

Conread position: 6-414
Cow position:
Alignm length: 413
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 50

Conread position: 6-415
Cow position:
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 133

Conread position: 6-415
Cow position:
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 37

Conread position: 6-415
Cow position:
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 150

Conread position: 6-415
Cow position:
Alignm length: 414
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 75

Conread position: 6-416
Cow position:
Alignm length: 415
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 133

Conread position: 6-417
Cow position:
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 150

Conread position: 6-417
Cow position:
Alignm length: 418
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 133

Conread position: 6-417
Cow position:
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 43

Conread position: 6-417
Cow position:
Alignm length: 417
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 134

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 20

Conread position: 6-417
Cow position:
Alignm length: 417
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 151

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 126

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 124

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 150

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 157

Conread position: 6-417
Cow position:
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 132

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 85

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 150

Conread position: 6-417
Cow position:
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 70

Conread position: 6-417
Cow position:
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 34

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 38

Conread position: 6-417
Cow position:
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 71

Conread position: 6-417
Cow position:
Alignm length: 417
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 133

Conread position: 6-417
Cow position:
Alignm length: 431
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 133

Conread position: 6-417
Cow position:
Alignm length: 416
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 52

Conread position: 6-418
Cow position:
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 133

Conread position: 6-418
Cow position:
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 132

Conread position: 6-423
Cow position:
Alignm length: 421
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 83

Conread position: 7-415
Cow position:
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 57

Conread position: 9-341
Cow position:
Alignm length: 334
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 30

Conread position: 10-415
Cow position:
Alignm length: 410
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 117

Conread position: 10-417
Cow position:
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 129

Conread position: 10-420
Cow position:
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 71

Conread position: 11-357
Cow position:
Alignm length: 348
Alignm identity: 248
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 205, 41

Conread position: 11-417
Cow position:
Alignm length: 411
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 145

Conread position: 12-249
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 118, 0

Conread position: 12-417
Cow position:
Alignm length: 410
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 144

Conread position: 13-417
Cow position:
Alignm length: 409
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 126

Conread position: 18-417
Cow position:
Alignm length: 403
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 130

Conread position: 19-415
Cow position:
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 5

Conread position: 21-410
Cow position:
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 24

Conread position: 23-417
Cow position:
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 56

Conread position: 24-415
Cow position:
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 56

Conread position: 24-417
Cow position:
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 63

Conread position: 29-415
Cow position:
Alignm length: 401
Alignm identity: 274
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 89, 53

Conread position: 29-417
Cow position:
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 95

Conread position: 29-417
Cow position:
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 69

Conread position: 30-393
Cow position:
Alignm length: 368
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 116

Conread position: 31-402
Cow position:
Alignm length: 373
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 45

Conread position: 33-383
Cow position:
Alignm length: 354
Alignm identity: 234
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 164, 186

Conread position: 33-417
Cow position:
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 12

Conread position: 40-417
Cow position:
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 8

Conread position: 46-415
Cow position:
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 99

Conread position: 56-415
Cow position:
Alignm length: 363
Alignm identity: 257
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 307, 13

Conread position: 60-415
Cow position:
Alignm length: 364
Alignm identity: 254
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 181, 83

Conread position: 64-367
Cow position:
Alignm length: 306
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 76

Conread position: 72-344
Cow position:
Alignm length: 275
Alignm identity: 200
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 152, 20

Conread position: 79-415
Cow position:
Alignm length: 345
Alignm identity: 241
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 51, 20

Conread position: 86-411
Cow position:
Alignm length: 334
Alignm identity: 236
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 71, 22

Conread position: 148-395
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 20, 159

Conread position: 153-417
Cow position:
Alignm length: 274
Alignm identity: 200
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 79, 64

Conread position: 164-417
Cow position:
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 63

Conread position: 168-415
Cow position:
Alignm length: 252
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 141

Conread position: 169-365
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 143

Conread position: 169-395
Cow position:
Alignm length: 228
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 71

Conread position: 169-402
Cow position:
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 140

Conread position: 169-414
Cow position:
Alignm length: 250
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 111

Conread position: 169-415
Cow position:
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 82

Conread position: 169-417
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 193, 82

Conread position: 169-417
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 141

Conread position: 169-417
Cow position:
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 134

Conread position: 169-417
Cow position:
Alignm length: 254
Alignm identity: 195
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 41, 56

Conread position: 169-417
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 58

Conread position: 169-425
Cow position:
Alignm length: 261
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 132

Conread position: 172-341
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 6, 0

Conread position: 172-366
Cow position:
Alignm length: 197
Alignm identity: 154
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 117, 41

Conread position: 172-423
Cow position:
Alignm length: 256
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 131

Conread position: 172-432
Cow position:
Alignm length: 266
Alignm identity: 178
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 190, 90

Conread position: 173-417
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 74, 140

Conread position: 174-417
Cow position:
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 134

Conread position: 174-445
Cow position:
Alignm length: 281
Alignm identity: 206
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 50, 165

Conread position: 175-417
Cow position:
Alignm length: 248
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 61

Conread position: 181-417
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 182, 48

Conread position: 181-420
Cow position:
Alignm length: 244
Alignm identity: 184
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 181, 128

Conread position: 185-346
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 124, 0

Show alignments to all cow chromosomes.