Cow genome map
| Conread name: | Pig1-14O13 |
| Conread position: | 2-126 |
| Cow position: | chr23:24626628-24626750 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 2-178 |
| Cow position: | chr23:24560234-24560058 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 125, 111 |
| Conread position: | 2-243 |
| Cow position: | chr23:24535725-24535484 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-183 |
| Cow position: | chr23:24546841-24546661 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-194 |
| Cow position: | chr23:24639873-24640064 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-210 |
| Cow position: | chr23:24626545-24626750 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 3-218 |
| Cow position: | chr23:24639369-24639584 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 3-224 |
| Cow position: | chr23:25626267-25626488 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-225 |
| Cow position: | chr23:25626600-25626822 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-226 |
| Cow position: | chr23:24560485-24560262 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-227 |
| Cow position: | chr23:24522415-24522191 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 214, 219 |
| Conread position: | 3-227 |
| Cow position: | chr23:24560317-24560094 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 204, 191 |
| Conread position: | 3-227 |
| Cow position: | chr23:24560569-24560345 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-227 |
| Cow position: | chr23:24560821-24560597 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-227 |
| Cow position: | chr23:24639621-24639845 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-227 |
| Cow position: | chr23:25660472-25660696 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-227 |
| Cow position: | chr23:25698587-25698363 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-227 |
| Cow position: | chr23:25724058-25723834 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-237 |
| Cow position: | chr23:24639537-24639771 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 60 |
| Conread position: | 3-242 |
| Cow position: | chr23:25698419-25698180 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-243 |
| Cow position: | chr23:24639705-24639945 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-243 |
| Cow position: | chr23:25660220-25660460 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 143, 154 |
| Conread position: | 3-243 |
| Cow position: | chr23:25723974-25723734 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-244 |
| Cow position: | chr23:24535808-24535567 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 239, 235 |
| Conread position: | 3-244 |
| Cow position: | chr23:24546925-24546684 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-244 |
| Cow position: | chr23:24626461-24626702 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 219, 212 |
| Conread position: | 3-245 |
| Cow position: | chr23:24535976-24535734 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 80 |
| Conread position: | 3-245 |
| Cow position: | chr23:24547009-24546767 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-245 |
| Cow position: | chr23:24547093-24546851 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-245 |
| Cow position: | chr23:24547261-24547019 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-245 |
| Cow position: | chr23:24560401-24560159 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-245 |
| Cow position: | chr23:24560653-24560411 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-245 |
| Cow position: | chr23:24626377-24626619 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-245 |
| Cow position: | chr23:24639789-24640031 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-245 |
| Cow position: | chr23:24654102-24654344 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-245 |
| Cow position: | chr23:25626768-25627010 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 178, 189 |
| Conread position: | 4-156 |
| Cow position: | chr23:24522330-24522177 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 4-227 |
| Cow position: | chr23:25660389-25660612 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-245 |
| Cow position: | chr23:24547176-24546935 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-245 |
| Cow position: | chr23:24639286-24639527 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 103 |
| Conread position: | 4-245 |
| Cow position: | chr23:24639454-24639695 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 42, 59 |
| Conread position: | 4-245 |
| Cow position: | chr23:25698502-25698261 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 103 |
| Conread position: | 5-193 |
| Cow position: | chr23:25660558-25660746 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-224 |
| Cow position: | chr23:25626437-25626653 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 5-237 |
| Cow position: | chr23:24522497-24522265 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-244 |
| Cow position: | chr23:25626686-25626925 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 147, 140 |
| Conread position: | 6-203 |
| Cow position: | chr23:25626186-25626383 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-226 |
| Cow position: | chr23:24535889-24535669 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-245 |
| Cow position: | chr23:24547336-24547103 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-226 |
| Cow position: | chr23:24522653-24522444 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 81, 45 |
| Conread position: | 14-227 |
| Cow position: | chr23:25660315-25660528 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-234 |
| Cow position: | chr23:25660147-25660367 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-245 |
| Cow position: | chr23:24626304-24626535 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-245 |
| Cow position: | chr23:24522569-24522341 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-226 |
| Cow position: | chr23:25626534-25626739 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 33-245 |
| Cow position: | chr23:25724112-25723900 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 34-227 |
| Cow position: | chr23:24536029-24535836 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 34-227 |
| Cow position: | chr23:24560874-24560681 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 34-227 |
| Cow position: | chr23:24654049-24654242 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 34-228 |
| Cow position: | chr23:25698304-25698110 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 183, 188 |
| Conread position: | 34-245 |
| Cow position: | chr23:24560706-24560495 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 62-245 |
| Cow position: | chr23:24626268-24626451 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 89-237 |
| Cow position: | chr23:24560903-24560755 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 96-227 |
| Cow position: | chr23:25660145-25660276 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.