Cow genome map
| Conread name: | Pig1-1B21 |
| Conread position: | 1-209 |
| Cow position: | chr11:23877785-23877993 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 197 |
| Conread position: | 1-256 |
| Cow position: | chr11:45922120-45921865 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 11, 147 |
| Conread position: | 1-257 |
| Cow position: | chr11:4063370-4063122 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 1-260 |
| Cow position: | chr11:12094057-12094318 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 16, 131 |
| Conread position: | 1-261 |
| Cow position: | chr11:29668119-29667854 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 248 |
| Conread position: | 1-261 |
| Cow position: | chr11:38834946-38834683 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 253 |
| Conread position: | 1-261 |
| Cow position: | chr11:41170206-41169942 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 1-261 |
| Cow position: | chr11:44156758-44156495 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 204 |
| Conread position: | 1-261 |
| Cow position: | chr11:47759794-47759529 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 1-261 |
| Cow position: | chr11:71330082-71330347 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 1-261 |
| Cow position: | chr11:85393318-85393062 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 1-262 |
| Cow position: | chr11:1495599-1495335 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 17, 247 |
| Conread position: | 1-263 |
| Cow position: | chr11:67450984-67451248 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 17, 108 |
| Conread position: | 1-337 |
| Cow position: | chr11:9216588-9216272 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 1-337 |
| Cow position: | chr11:30123357-30123029 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 1-338 |
| Cow position: | chr11:5342432-5342108 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 17, 206 |
| Conread position: | 1-338 |
| Cow position: | chr11:9156668-9156340 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 17, 204 |
| Conread position: | 1-338 |
| Cow position: | chr11:9601843-9601503 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 183 |
| Conread position: | 1-338 |
| Cow position: | chr11:9734183-9733867 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 1-338 |
| Cow position: | chr11:37476511-37476172 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 17, 218 |
| Conread position: | 1-338 |
| Cow position: | chr11:53431569-53431239 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 251 |
| Conread position: | 1-338 |
| Cow position: | chr11:57627569-57627242 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 17, 241 |
| Conread position: | 2-229 |
| Cow position: | chr11:10091172-10091400 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 10 |
| Conread position: | 2-265 |
| Cow position: | chr11:26564589-26564335 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 2-338 |
| Cow position: | chr11:26548001-26548328 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 246 |
| Conread position: | 5-261 |
| Cow position: | chr11:44252293-44252549 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 78 |
| Conread position: | 22-255 |
| Cow position: | chr11:24393827-24394059 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 186 |
| Conread position: | 23-262 |
| Cow position: | chr11:36763263-36763502 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 51-261 |
| Cow position: | chr11:7110560-7110356 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 80, 10 |
| Conread position: | 58-311 |
| Cow position: | chr11:7116998-7117250 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 151, 134 |
| Conread position: | 60-337 |
| Cow position: | chr11:40775461-40775187 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 185 |
| Conread position: | 89-256 |
| Cow position: | chr11:72310455-72310286 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 122, 114 |
Show alignments to all cow chromosomes.