Cow genome map
| Conread name: | Pig1-1B21 |
| Conread position: | 1-175 |
| Cow position: | chr16:30049576-30049755 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-227 |
| Cow position: | chr16:20202008-20202237 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-242 |
| Cow position: | chr16:27733700-27733462 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 1-246 |
| Cow position: | chr16:16271048-16270800 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 1-257 |
| Cow position: | chr16:23802021-23801764 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 1-261 |
| Cow position: | chr16:2410875-2410612 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 246 |
| Conread position: | 1-261 |
| Cow position: | chr16:8816015-8815751 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-261 |
| Cow position: | chr16:12537833-12537573 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 1-261 |
| Cow position: | chr16:15476933-15477195 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 7 |
| Conread position: | 1-261 |
| Cow position: | chr16:25441718-25441984 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-261 |
| Cow position: | chr16:26663841-26664106 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 204 |
| Conread position: | 1-261 |
| Cow position: | chr16:40296085-40295821 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 165 |
| Conread position: | 1-262 |
| Cow position: | chr16:1567361-1567099 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 154 |
| Conread position: | 1-262 |
| Cow position: | chr16:2483048-2482783 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-262 |
| Cow position: | chr16:25085708-25085968 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 79 |
| Conread position: | 1-266 |
| Cow position: | chr16:37455920-37455661 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 60, 87 |
| Conread position: | 1-338 |
| Cow position: | chr16:25342060-25342382 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 246 |
| Conread position: | 1-338 |
| Cow position: | chr16:29047114-29047435 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 1-338 |
| Cow position: | chr16:51084230-51084563 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 257 |
| Conread position: | 2-266 |
| Cow position: | chr16:25258038-25258311 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 252 |
| Conread position: | 2-337 |
| Cow position: | chr16:29034143-29034475 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 86 |
| Conread position: | 2-338 |
| Cow position: | chr16:4478890-4478558 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 249 |
| Conread position: | 5-242 |
| Cow position: | chr16:51405846-51405615 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 13, 42 |
| Conread position: | 5-259 |
| Cow position: | chr16:1860317-1860572 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 207 |
| Conread position: | 8-338 |
| Cow position: | chr16:28170273-28169947 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 10, 251 |
| Conread position: | 23-261 |
| Cow position: | chr16:26105941-26105709 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 180, 24 |
| Conread position: | 38-263 |
| Cow position: | chr16:10565629-10565404 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 72-262 |
| Cow position: | chr16:26978302-26978493 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 140, 174 |
| Conread position: | 77-265 |
| Cow position: | chr16:41570448-41570635 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 135, 125 |
| Conread position: | 82-267 |
| Cow position: | chr16:19151450-19151261 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 98-261 |
| Cow position: | chr16:15567444-15567609 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 109, 148 |
| Conread position: | 98-338 |
| Cow position: | chr16:837502-837732 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 39, 106 |
| Conread position: | 132-266 |
| Cow position: | chr16:7464051-7464186 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 75, 113 |
Show alignments to all cow chromosomes.