Cow genome map
| Conread name: | Pig1-1B21 |
| Conread position: | 1-224 |
| Cow position: | chr3:7480524-7480299 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 206 |
| Conread position: | 1-256 |
| Cow position: | chr3:2907065-2906808 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 222 |
| Conread position: | 1-259 |
| Cow position: | chr3:45894846-45894586 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 147 |
| Conread position: | 1-259 |
| Cow position: | chr3:49271403-49271150 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 60, 82 |
| Conread position: | 1-261 |
| Cow position: | chr3:29579331-29579594 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 1-261 |
| Cow position: | chr3:40824096-40824356 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 1-261 |
| Cow position: | chr3:49544506-49544242 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 189 |
| Conread position: | 1-261 |
| Cow position: | chr3:66620888-66621151 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 149 |
| Conread position: | 1-261 |
| Cow position: | chr3:78026713-78026453 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 1-264 |
| Cow position: | chr3:59862079-59862346 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 1-266 |
| Cow position: | chr3:48058650-48058385 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 153 |
| Conread position: | 1-270 |
| Cow position: | chr3:45975207-45975480 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 204 |
| Conread position: | 1-337 |
| Cow position: | chr3:50126928-50126587 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 1-338 |
| Cow position: | chr3:2869484-2869815 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 251 |
| Conread position: | 1-338 |
| Cow position: | chr3:3523726-3524058 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 252 |
| Conread position: | 1-338 |
| Cow position: | chr3:19756244-19755910 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 251 |
| Conread position: | 1-338 |
| Cow position: | chr3:32622338-32622005 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 244 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 17, 179 |
| Conread position: | 1-338 |
| Cow position: | chr3:58948320-58948652 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 247 |
| Conread position: | 2-294 |
| Cow position: | chr3:83294205-83293913 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 2-336 |
| Cow position: | chr3:48229765-48229450 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 205, 20 |
| Conread position: | 4-242 |
| Cow position: | chr3:38493946-38494184 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 207, 18 |
| Conread position: | 5-257 |
| Cow position: | chr3:77424343-77424599 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 13, 141 |
| Conread position: | 5-261 |
| Cow position: | chr3:10240367-10240626 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 17 |
| Conread position: | 5-267 |
| Cow position: | chr3:3841101-3840835 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 5-337 |
| Cow position: | chr3:19944939-19945267 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 241 |
| Conread position: | 8-337 |
| Cow position: | chr3:24353619-24353936 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 148 |
| Conread position: | 22-267 |
| Cow position: | chr3:30315290-30315527 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 59-337 |
| Cow position: | chr3:11198790-11198525 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 47 |
| Conread position: | 76-258 |
| Cow position: | chr3:37625779-37625959 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 131, 34 |
Show alignments to all cow chromosomes.