Cow genome map
| Conread name: | Pig1-1B21 |
| Conread position: | 1-242 |
| Cow position: | chr5:4757557-4757313 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 24, 198 |
| Conread position: | 1-242 |
| Cow position: | chr5:42505610-42505856 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 17, 199 |
| Conread position: | 1-255 |
| Cow position: | chr5:1341425-1341169 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 179 |
| Conread position: | 1-255 |
| Cow position: | chr5:46737967-46737712 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 171 |
| Conread position: | 1-257 |
| Cow position: | chr5:27056075-27055813 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-261 |
| Cow position: | chr5:6154293-6154032 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 133 |
| Conread position: | 1-261 |
| Cow position: | chr5:55628598-55628861 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 246 |
| Conread position: | 1-262 |
| Cow position: | chr5:57481932-57481669 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 246 |
| Conread position: | 1-281 |
| Cow position: | chr5:41554724-41554446 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 1-297 |
| Cow position: | chr5:45700921-45701218 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 120 |
| Conread position: | 1-336 |
| Cow position: | chr5:4018594-4018268 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 17, 209 |
| Conread position: | 1-337 |
| Cow position: | chr5:41961117-41960806 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 1-337 |
| Cow position: | chr5:46629583-46629252 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 17, 214 |
| Conread position: | 1-338 |
| Cow position: | chr5:3503509-3503177 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 1-338 |
| Cow position: | chr5:3786528-3786856 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 21 |
| Conread position: | 1-338 |
| Cow position: | chr5:14784755-14784427 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 1-338 |
| Cow position: | chr5:59061220-59061565 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 17, 290 |
| Conread position: | 5-338 |
| Cow position: | chr5:30579940-30580267 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 248 |
| Conread position: | 8-338 |
| Cow position: | chr5:31707164-31707492 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 233 |
| Conread position: | 22-261 |
| Cow position: | chr5:49519190-49519430 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 22-338 |
| Cow position: | chr5:6588394-6588081 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 39, 158 |
| Conread position: | 23-260 |
| Cow position: | chr5:48532659-48532892 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 38, 8 |
| Conread position: | 24-262 |
| Cow position: | chr5:18273374-18273613 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 186, 37 |
| Conread position: | 36-263 |
| Cow position: | chr5:13046094-13046320 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 25, 59 |
| Conread position: | 56-299 |
| Cow position: | chr5:59639444-59639679 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 70, 30 |
| Conread position: | 65-336 |
| Cow position: | chr5:9419398-9419134 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 41, 127 |
| Conread position: | 68-246 |
| Cow position: | chr5:26346298-26346477 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 144, 41 |
| Conread position: | 77-338 |
| Cow position: | chr5:5103890-5104151 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 132, 208 |
| Conread position: | 93-241 |
| Cow position: | chr5:14344718-14344569 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 101 |
| Conread position: | 143-260 |
| Cow position: | chr5:24999235-24999118 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 102 |
| Conread position: | 146-280 |
| Cow position: | chr5:29435032-29434898 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 92, 48 |
Show alignments to all cow chromosomes.