Cow genome map

Conread name: Pig1-34D03

Conread position: 4-443
Cow position:
Alignm length: 466
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 24

Conread position: 6-385
Cow position:
Alignm length: 386
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 22

Conread position: 7-340
Cow position:
Alignm length: 335
Alignm identity: 218
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 247, 17

Conread position: 7-471
Cow position:
Alignm length: 477
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 81

Conread position: 11-469
Cow position:
Alignm length: 470
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 13

Conread position: 15-419
Cow position:
Alignm length: 417
Alignm identity: 283
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 12, 5

Conread position: 15-471
Cow position:
Alignm length: 468
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 169

Conread position: 16-337
Cow position:
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 65

Conread position: 16-354
Cow position:
Alignm length: 349
Alignm identity: 229
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 88

Conread position: 16-359
Cow position:
Alignm length: 350
Alignm identity: 238
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 12, 23

Conread position: 16-363
Cow position:
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 198

Conread position: 16-383
Cow position:
Alignm length: 379
Alignm identity: 252
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 71, 197

Conread position: 16-402
Cow position:
Alignm length: 391
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 103, 64

Conread position: 16-403
Cow position:
Alignm length: 392
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 109

Conread position: 16-404
Cow position:
Alignm length: 391
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 137

Conread position: 16-456
Cow position:
Alignm length: 444
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 107

Conread position: 16-462
Cow position:
Alignm length: 463
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 208

Conread position: 16-467
Cow position:
Alignm length: 466
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 188

Conread position: 16-469
Cow position:
Alignm length: 470
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 210

Conread position: 16-471
Cow position:
Alignm length: 487
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 85

Conread position: 16-471
Cow position:
Alignm length: 467
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 17

Conread position: 16-471
Cow position:
Alignm length: 469
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 205

Conread position: 16-471
Cow position:
Alignm length: 468
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 204

Conread position: 16-471
Cow position:
Alignm length: 466
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 61

Conread position: 16-471
Cow position:
Alignm length: 472
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 112

Conread position: 16-471
Cow position:
Alignm length: 468
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 205

Conread position: 16-471
Cow position:
Alignm length: 462
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 170

Conread position: 16-472
Cow position:
Alignm length: 473
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 85

Conread position: 16-477
Cow position:
Alignm length: 475
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 30

Conread position: 17-200
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 77, 22

Conread position: 17-469
Cow position:
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 108

Conread position: 17-471
Cow position:
Alignm length: 466
Alignm identity: 302
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 11, 81

Conread position: 17-477
Cow position:
Alignm length: 475
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 97

Conread position: 18-180
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 100

Conread position: 18-202
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 6, 12

Conread position: 18-253
Cow position:
Alignm length: 237
Alignm identity: 176
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 74, 11

Conread position: 18-283
Cow position:
Alignm length: 269
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 6

Conread position: 18-286
Cow position:
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 6

Conread position: 18-300
Cow position:
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-359
Cow position:
Alignm length: 343
Alignm identity: 224
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 117

Conread position: 18-404
Cow position:
Alignm length: 394
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 164

Conread position: 18-448
Cow position:
Alignm length: 448
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 108

Conread position: 18-462
Cow position:
Alignm length: 457
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 106

Conread position: 18-462
Cow position:
Alignm length: 456
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 80

Conread position: 18-465
Cow position:
Alignm length: 460
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 6

Conread position: 18-465
Cow position:
Alignm length: 461
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-468
Cow position:
Alignm length: 463
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 107

Conread position: 18-469
Cow position:
Alignm length: 466
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-469
Cow position:
Alignm length: 466
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-469
Cow position:
Alignm length: 462
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 7

Conread position: 18-471
Cow position:
Alignm length: 467
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 136

Conread position: 18-471
Cow position:
Alignm length: 469
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 204

Conread position: 18-471
Cow position:
Alignm length: 467
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-471
Cow position:
Alignm length: 464
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 110

Conread position: 18-471
Cow position:
Alignm length: 468
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 110

Conread position: 18-471
Cow position:
Alignm length: 465
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 101

Conread position: 18-471
Cow position:
Alignm length: 464
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 165

Conread position: 18-471
Cow position:
Alignm length: 467
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 18-471
Cow position:
Alignm length: 478
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 201

Conread position: 18-472
Cow position:
Alignm length: 468
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 106

Conread position: 18-472
Cow position:
Alignm length: 466
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 202

Conread position: 18-472
Cow position:
Alignm length: 467
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 202

Conread position: 18-472
Cow position:
Alignm length: 468
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-472
Cow position:
Alignm length: 473
Alignm identity: 308
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 35, 167

Conread position: 19-471
Cow position:
Alignm length: 469
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 211

Conread position: 21-234
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 7, 200

Conread position: 24-471
Cow position:
Alignm length: 465
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 181

Conread position: 24-472
Cow position:
Alignm length: 463
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 5

Conread position: 27-469
Cow position:
Alignm length: 446
Alignm identity: 286
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 64, 121

Conread position: 27-471
Cow position:
Alignm length: 458
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 97

Conread position: 27-471
Cow position:
Alignm length: 455
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 132

Conread position: 29-191
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 29-471
Cow position:
Alignm length: 453
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 193

Conread position: 42-471
Cow position:
Alignm length: 446
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 178

Conread position: 43-470
Cow position:
Alignm length: 429
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 134

Conread position: 46-199
Cow position:
Alignm length: 154
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 55-369
Cow position:
Alignm length: 322
Alignm identity: 222
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 35, 46

Conread position: 65-462
Cow position:
Alignm length: 409
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 156

Conread position: 69-462
Cow position:
Alignm length: 398
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 165

Conread position: 70-460
Cow position:
Alignm length: 403
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 150

Conread position: 95-472
Cow position:
Alignm length: 389
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 124

Conread position: 109-471
Cow position:
Alignm length: 376
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 18

Conread position: 110-369
Cow position:
Alignm length: 263
Alignm identity: 176
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 25

Conread position: 120-476
Cow position:
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 138

Conread position: 121-477
Cow position:
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 110

Conread position: 135-360
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 67, 41

Conread position: 149-400
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 28, 9

Conread position: 161-403
Cow position:
Alignm length: 247
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 58

Conread position: 171-290
Cow position:
Alignm length: 122
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 48

Conread position: 185-461
Cow position:
Alignm length: 300
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 37

Conread position: 195-471
Cow position:
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 27

Conread position: 198-401
Cow position:
Alignm length: 205
Alignm identity: 158
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 136, 22

Conread position: 204-471
Cow position:
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 19

Conread position: 224-471
Cow position:
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 210

Conread position: 266-471
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 71, 160

Conread position: 273-469
Cow position:
Alignm length: 205
Alignm identity: 159
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 130, 152

Conread position: 282-471
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 70, 53

Conread position: 284-471
Cow position:
Alignm length: 200
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 141

Show alignments to all cow chromosomes.