Cow genome map

Conread name: Pig1-34D03

Conread position: 4-443
Cow position: chr10:39904771-39905233 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 24

Conread position: 6-385
Cow position: chr10:276438-276816 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 22

Conread position: 7-340
Cow position: chr10:47063266-47063595 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 218
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 247, 17

Conread position: 7-471
Cow position: chr10:19496432-19495966 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 81

Conread position: 11-469
Cow position: chr10:124162-124628 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 13

Conread position: 15-419
Cow position: chr10:42109585-42109988 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 283
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 12, 5

Conread position: 15-471
Cow position: chr10:25565392-25564938 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 169

Conread position: 16-337
Cow position: chr10:60489518-60489830 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 65

Conread position: 16-354
Cow position: chr10:32064004-32064345 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 88

Conread position: 16-359
Cow position: chr10:28116571-28116235 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 12, 23

Conread position: 16-363
Cow position: chr10:54059500-54059151 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 198

Conread position: 16-383
Cow position: chr10:184117-184494 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 252
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 71, 197

Conread position: 16-402
Cow position: chr10:58860820-58860442 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 103, 64

Conread position: 16-403
Cow position: chr10:29633006-29632618 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 109

Conread position: 16-404
Cow position: chr10:24313973-24313592 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 137

Conread position: 16-456
Cow position: chr10:38847225-38847648 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 107

Conread position: 16-462
Cow position: chr10:38345511-38345051 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 208

Conread position: 16-467
Cow position: chr10:41351902-41351444 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 188

Conread position: 16-469
Cow position: chr10:62216458-62216924 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 210

Conread position: 16-471
Cow position: chr10:10478292-10477816 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 85

Conread position: 16-471
Cow position: chr10:11685812-11685351 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 17

Conread position: 16-471
Cow position: chr10:21740897-21740432 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 205

Conread position: 16-471
Cow position: chr10:25498207-25498672 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 204

Conread position: 16-471
Cow position: chr10:29696093-29696551 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 61

Conread position: 16-471
Cow position: chr10:34685747-34686214 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 112

Conread position: 16-471
Cow position: chr10:47906632-47907098 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 205

Conread position: 16-471
Cow position: chr10:51952750-51952302 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 170

Conread position: 16-472
Cow position: chr10:21486768-21487236 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 85

Conread position: 16-477
Cow position: chr10:41566962-41567430 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 30

Conread position: 17-200
Cow position: chr10:42628519-42628701 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 77, 22

Conread position: 17-469
Cow position: chr10:15862279-15861822 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 108

Conread position: 17-471
Cow position: chr10:16475617-16476076 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 302
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 11, 81

Conread position: 17-477
Cow position: chr10:3543721-3543262 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 97

Conread position: 18-180
Cow position: chr10:10581530-10581693 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 100

Conread position: 18-202
Cow position: chr10:37060787-37060966 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 6, 12

Conread position: 18-253
Cow position: chr10:57990105-57989872 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 74, 11

Conread position: 18-283
Cow position: chr10:29846750-29846485 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 6

Conread position: 18-286
Cow position: chr10:42747959-42748217 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 6

Conread position: 18-300
Cow position: chr10:19840009-19840294 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-359
Cow position: chr10:42683280-42683590 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 224
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 117

Conread position: 18-404
Cow position: chr10:19143482-19143092 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 164

Conread position: 18-448
Cow position: chr10:38538640-38538196 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 108

Conread position: 18-462
Cow position: chr10:7282826-7282376 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 106

Conread position: 18-462
Cow position: chr10:22101098-22101541 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 80

Conread position: 18-465
Cow position: chr10:13365993-13365556 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 6

Conread position: 18-465
Cow position: chr10:39179640-39180097 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-468
Cow position: chr10:14859834-14860280 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 107

Conread position: 18-469
Cow position: chr10:19511462-19511924 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-469
Cow position: chr10:37769679-37770139 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-469
Cow position: chr10:62408992-62408539 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 7

Conread position: 18-471
Cow position: chr10:280763-280301 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 136

Conread position: 18-471
Cow position: chr10:14803691-14804156 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 204

Conread position: 18-471
Cow position: chr10:21400815-21400351 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-471
Cow position: chr10:24298998-24298540 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 110

Conread position: 18-471
Cow position: chr10:24978277-24977819 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 110

Conread position: 18-471
Cow position: chr10:32578160-32578608 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 101

Conread position: 18-471
Cow position: chr10:39817493-39817043 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 165

Conread position: 18-471
Cow position: chr10:41157307-41157767 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 18-471
Cow position: chr10:57559692-57559216 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 201

Conread position: 18-472
Cow position: chr10:1375393-1375854 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 106

Conread position: 18-472
Cow position: chr10:8289840-8290299 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 202

Conread position: 18-472
Cow position: chr10:25359256-25359720 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 202

Conread position: 18-472
Cow position: chr10:32650589-32651054 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-472
Cow position: chr10:44294697-44295155 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 308
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 35, 167

Conread position: 19-471
Cow position: chr10:62778202-62778668 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 211

Conread position: 21-234
Cow position: chr10:65307983-65308199 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 7, 200

Conread position: 24-471
Cow position: chr10:4192355-4191906 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 181

Conread position: 24-472
Cow position: chr10:39041440-39040981 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 5

Conread position: 27-469
Cow position: chr10:14928515-14928939 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 286
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 64, 121

Conread position: 27-471
Cow position: chr10:38546356-38545905 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 97

Conread position: 27-471
Cow position: chr10:46191234-46191677 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 132

Conread position: 29-191
Cow position: chr10:31523700-31523856 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 29-471
Cow position: chr10:41876787-41877238 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 193

Conread position: 42-471
Cow position: chr10:39854133-39853690 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 178

Conread position: 43-470
Cow position: chr10:22842663-22843067 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 134

Conread position: 46-199
Cow position: chr10:28932459-28932308 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 55-369
Cow position: chr10:66176006-66175694 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 35, 46

Conread position: 65-462
Cow position: chr10:16925439-16925846 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 156

Conread position: 69-462
Cow position: chr10:58377682-58377296 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 165

Conread position: 70-460
Cow position: chr10:46694466-46694067 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 150

Conread position: 95-472
Cow position: chr10:2123327-2122941 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 124

Conread position: 109-471
Cow position: chr10:40152505-40152134 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 18

Conread position: 110-369
Cow position: chr10:51215302-51215558 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 25

Conread position: 120-476
Cow position: chr10:49310466-49310813 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 138

Conread position: 121-477
Cow position: chr10:34318331-34317967 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 110

Conread position: 135-360
Cow position: chr10:54979905-54979681 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 67, 41

Conread position: 149-400
Cow position: chr10:6260804-6260555 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 28, 9

Conread position: 161-403
Cow position: chr10:55093243-55093484 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 58

Conread position: 171-290
Cow position: chr10:25454601-25454721 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 48

Conread position: 185-461
Cow position: chr10:10581817-10582113 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 37

Conread position: 195-471
Cow position: chr10:19758386-19758668 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 27

Conread position: 198-401
Cow position: chr10:28931985-28931782 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 136, 22

Conread position: 204-471
Cow position: chr10:33346647-33346920 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 19

Conread position: 224-471
Cow position: chr10:8328209-8327951 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 210

Conread position: 266-471
Cow position: chr10:42628730-42628943 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 71, 160

Conread position: 273-469
Cow position: chr10:31523913-31524116 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 130, 152

Conread position: 282-471
Cow position: chr10:19802679-19802873 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 70, 53

Conread position: 284-471
Cow position: chr10:47157073-47157268 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 141

Show alignments to all cow chromosomes.