Cow genome map
| Conread name: | Pig1-34D03 |
| Conread position: | 14-472 |
| Cow position: | chr12:22205966-22205502 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 8 |
| Conread position: | 15-439 |
| Cow position: | chr12:15951480-15951050 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 65 |
| Conread position: | 16-201 |
| Cow position: | chr12:22026534-22026718 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 16-215 |
| Cow position: | chr12:48404826-48405026 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 75, 108 |
| Conread position: | 16-394 |
| Cow position: | chr12:8982636-8982263 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 180 |
| Conread position: | 16-400 |
| Cow position: | chr12:10483822-10484198 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 73, 102 |
| Conread position: | 16-402 |
| Cow position: | chr12:21207474-21207863 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 235 |
| Conread position: | 16-462 |
| Cow position: | chr12:8678342-8677885 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 65 |
| Conread position: | 16-462 |
| Cow position: | chr12:25101282-25100825 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 205 |
| Conread position: | 16-465 |
| Cow position: | chr12:21426473-21426933 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 205 |
| Conread position: | 16-471 |
| Cow position: | chr12:21901723-21902184 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 102 |
| Conread position: | 16-471 |
| Cow position: | chr12:22332398-22332869 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 112 |
| Conread position: | 16-471 |
| Cow position: | chr12:37558336-37558801 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 16-472 |
| Cow position: | chr12:1402270-1402736 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 205 |
| Conread position: | 18-406 |
| Cow position: | chr12:26141595-26141987 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-465 |
| Cow position: | chr12:3360685-3361143 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 203 |
| Conread position: | 18-469 |
| Cow position: | chr12:2282328-2282789 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 146 |
| Conread position: | 18-469 |
| Cow position: | chr12:14662829-14662390 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 18-469 |
| Cow position: | chr12:42860033-42859584 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 18-471 |
| Cow position: | chr12:2580-3044 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-471 |
| Cow position: | chr12:26947198-26946745 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 169 |
| Conread position: | 18-471 |
| Cow position: | chr12:32653326-32653789 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 202 |
| Conread position: | 18-472 |
| Cow position: | chr12:252272-251812 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 6 |
| Conread position: | 18-472 |
| Cow position: | chr12:11098023-11098488 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 19-472 |
| Cow position: | chr12:20998337-20997887 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 20-471 |
| Cow position: | chr12:21254872-21254411 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 201 |
| Conread position: | 20-471 |
| Cow position: | chr12:43031599-43031140 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 21-471 |
| Cow position: | chr12:8310970-8311426 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 202 |
| Conread position: | 22-471 |
| Cow position: | chr12:21941560-21942013 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 169 |
| Conread position: | 23-180 |
| Cow position: | chr12:21197612-21197772 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 23-472 |
| Cow position: | chr12:6406858-6406405 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 6 |
| Conread position: | 23-472 |
| Cow position: | chr12:28766228-28765773 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 6 |
| Conread position: | 25-471 |
| Cow position: | chr12:45261404-45261868 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 196 |
| Conread position: | 28-181 |
| Cow position: | chr12:42420328-42420176 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 142 |
| Conread position: | 29-472 |
| Cow position: | chr12:27933152-27932699 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 191 |
| Conread position: | 55-473 |
| Cow position: | chr12:17617078-17616671 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 186-460 |
| Cow position: | chr12:2838903-2838621 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 224-474 |
| Cow position: | chr12:21197948-21198210 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 224-474 |
| Cow position: | chr12:48405261-48405497 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 89, 183 |
| Conread position: | 230-471 |
| Cow position: | chr12:33986158-33986407 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 110, 199 |
| Conread position: | 289-471 |
| Cow position: | chr12:5861209-5861398 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 79 |
| Conread position: | 292-471 |
| Cow position: | chr12:23240063-23240248 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 44, 15 |
Show alignments to all cow chromosomes.