Cow genome map
| Conread name: | Pig1-34D03 |
| Conread position: | 6-465 |
| Cow position: | chr13:2297250-2296793 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 215 |
| Conread position: | 11-471 |
| Cow position: | chr13:34936695-34937172 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 13 |
| Conread position: | 16-139 |
| Cow position: | chr13:13046263-13046141 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 76, 108 |
| Conread position: | 16-165 |
| Cow position: | chr13:3058437-3058283 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 16-191 |
| Cow position: | chr13:47860008-47860183 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 125 |
| Conread position: | 16-233 |
| Cow position: | chr13:30237734-30237945 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 109 |
| Conread position: | 16-300 |
| Cow position: | chr13:2232215-2232505 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 208 |
| Conread position: | 16-335 |
| Cow position: | chr13:30302624-30302944 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 16-361 |
| Cow position: | chr13:1559582-1559916 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 75, 62 |
| Conread position: | 16-402 |
| Cow position: | chr13:21130884-21131267 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 82 |
| Conread position: | 16-462 |
| Cow position: | chr13:6668568-6668108 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 16-462 |
| Cow position: | chr13:58261671-58262122 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 144 |
| Conread position: | 16-466 |
| Cow position: | chr13:2908888-2908430 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 16-471 |
| Cow position: | chr13:3276713-3277178 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 208 |
| Conread position: | 16-471 |
| Cow position: | chr13:4872635-4873100 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 205 |
| Conread position: | 16-471 |
| Cow position: | chr13:13324313-13324773 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 16-471 |
| Cow position: | chr13:17308036-17308499 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 8 |
| Conread position: | 16-471 |
| Cow position: | chr13:30657405-30656953 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 103 |
| Conread position: | 16-471 |
| Cow position: | chr13:32986491-32986033 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 161 |
| Conread position: | 16-471 |
| Cow position: | chr13:33825172-33824711 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 202 |
| Conread position: | 16-471 |
| Cow position: | chr13:33928003-33927563 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 186 |
| Conread position: | 16-471 |
| Cow position: | chr13:50109022-50109486 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 109 |
| Conread position: | 16-471 |
| Cow position: | chr13:56730723-56730263 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 109 |
| Conread position: | 16-471 |
| Cow position: | chr13:62328026-62327560 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 112 |
| Conread position: | 16-472 |
| Cow position: | chr13:9044066-9044525 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 63 |
| Conread position: | 16-473 |
| Cow position: | chr13:30140549-30141020 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 139 |
| Conread position: | 16-477 |
| Cow position: | chr13:34143101-34142626 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 173 |
| Conread position: | 17-403 |
| Cow position: | chr13:30245177-30244784 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 207 |
| Conread position: | 17-471 |
| Cow position: | chr13:20542804-20542351 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 58 |
| Conread position: | 17-471 |
| Cow position: | chr13:34187131-34186663 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 415 |
| Conread position: | 17-472 |
| Cow position: | chr13:32738261-32737797 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 204 |
| Conread position: | 18-269 |
| Cow position: | chr13:32544508-32544754 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 10, 48 |
| Conread position: | 18-288 |
| Cow position: | chr13:34868330-34868606 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 112 |
| Conread position: | 18-402 |
| Cow position: | chr13:33336762-33336394 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 18-445 |
| Cow position: | chr13:23003955-23003520 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 203 |
| Conread position: | 18-462 |
| Cow position: | chr13:35756801-35757256 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 202 |
| Conread position: | 18-464 |
| Cow position: | chr13:22186161-22185722 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 18-469 |
| Cow position: | chr13:1593591-1593134 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 11 |
| Conread position: | 18-469 |
| Cow position: | chr13:15520953-15520493 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 150 |
| Conread position: | 18-471 |
| Cow position: | chr13:31734520-31734061 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 142 |
| Conread position: | 18-471 |
| Cow position: | chr13:34326116-34325651 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 49 |
| Conread position: | 18-471 |
| Cow position: | chr13:34692723-34693189 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-471 |
| Cow position: | chr13:49973243-49973708 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 215 |
| Conread position: | 18-472 |
| Cow position: | chr13:3654750-3654301 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 204 |
| Conread position: | 18-472 |
| Cow position: | chr13:15924819-15924359 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 6 |
| Conread position: | 18-472 |
| Cow position: | chr13:21840634-21840169 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 203 |
| Conread position: | 18-472 |
| Cow position: | chr13:31612775-31612311 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-472 |
| Cow position: | chr13:34042804-34042344 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 191 |
| Conread position: | 18-475 |
| Cow position: | chr13:2306061-2306520 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 318 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 26, 122 |
| Conread position: | 20-186 |
| Cow position: | chr13:4482041-4482201 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 20-472 |
| Cow position: | chr13:4940651-4941113 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 21-471 |
| Cow position: | chr13:54284149-54284594 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 10 |
| Conread position: | 21-477 |
| Cow position: | chr13:31832166-31832629 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 103 |
| Conread position: | 24-471 |
| Cow position: | chr13:43852729-43852271 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 119, 5 |
| Conread position: | 27-469 |
| Cow position: | chr13:34911798-34911357 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 48 |
| Conread position: | 32-466 |
| Cow position: | chr13:35030124-35030570 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 170 |
| Conread position: | 51-454 |
| Cow position: | chr13:19438537-19438941 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 279 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 39, 148 |
| Conread position: | 53-354 |
| Cow position: | chr13:19615874-19615576 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 81-301 |
| Cow position: | chr13:15451860-15451653 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 11, 99 |
| Conread position: | 93-471 |
| Cow position: | chr13:34767638-34767271 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 248, 55 |
| Conread position: | 94-477 |
| Cow position: | chr13:3567423-3567826 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 29 |
| Conread position: | 117-471 |
| Cow position: | chr13:2389160-2388794 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 5 |
| Conread position: | 163-460 |
| Cow position: | chr13:47230279-47229974 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 197-471 |
| Cow position: | chr13:46732479-46732204 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 223-471 |
| Cow position: | chr13:4178883-4178627 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 226-462 |
| Cow position: | chr13:4483569-4483809 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 120, 52 |
| Conread position: | 251-471 |
| Cow position: | chr13:16343415-16343194 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 151, 94 |
| Conread position: | 278-403 |
| Cow position: | chr13:30237941-30238067 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 283-471 |
| Cow position: | chr13:60466165-60466361 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 57, 146 |
| Conread position: | 285-471 |
| Cow position: | chr13:3058281-3058086 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 55, 145 |
| Conread position: | 314-472 |
| Cow position: | chr13:32544918-32545084 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 111 |
| Conread position: | 322-471 |
| Cow position: | chr13:34868607-34868766 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 336-471 |
| Cow position: | chr13:676758-676900 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 67, 89 |
Show alignments to all cow chromosomes.