Cow genome map

Conread name: Pig1-34D03

Conread position: 5-471
Cow position: chr14:2283763-2284239 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 216

Conread position: 6-471
Cow position: chr14:47623994-47624453 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 176

Conread position: 15-471
Cow position: chr14:45303929-45303464 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 167

Conread position: 16-316
Cow position: chr14:31607486-31607192 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 99

Conread position: 16-403
Cow position: chr14:41755296-41755669 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 148

Conread position: 16-467
Cow position: chr14:47640581-47641034 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 110

Conread position: 16-471
Cow position: chr14:23256793-23257259 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 205

Conread position: 16-471
Cow position: chr14:23690792-23690329 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 196

Conread position: 16-471
Cow position: chr14:29048466-29048003 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 94

Conread position: 16-471
Cow position: chr14:36967691-36968155 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 52

Conread position: 16-471
Cow position: chr14:38816765-38816310 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 304
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 26, 135

Conread position: 16-471
Cow position: chr14:40170242-40169802 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 302
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 90, 10

Conread position: 16-471
Cow position: chr14:42151756-42152223 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 112

Conread position: 16-471
Cow position: chr14:44225845-44226297 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 108

Conread position: 16-471
Cow position: chr14:44421989-44422454 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 72

Conread position: 16-471
Cow position: chr14:44855993-44855527 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 112

Conread position: 16-471
Cow position: chr14:45029681-45029224 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 80

Conread position: 16-471
Cow position: chr14:45205505-45205977 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 217

Conread position: 16-471
Cow position: chr14:45712543-45712091 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 112

Conread position: 16-472
Cow position: chr14:5528499-5528963 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 8

Conread position: 16-472
Cow position: chr14:11154721-11154265 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 85

Conread position: 16-472
Cow position: chr14:19328834-19328367 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 205

Conread position: 16-474
Cow position: chr14:40339142-40339586 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 97

Conread position: 16-477
Cow position: chr14:45850660-45851130 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 156

Conread position: 17-454
Cow position: chr14:46084058-46084502 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 67

Conread position: 17-471
Cow position: chr14:45833597-45834054 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 65

Conread position: 17-471
Cow position: chr14:50134508-50134974 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 90

Conread position: 17-474
Cow position: chr14:35928614-35929078 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 106

Conread position: 18-195
Cow position: chr14:1500467-1500645 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 143

Conread position: 18-400
Cow position: chr14:21743038-21743425 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 269
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 16, 83

Conread position: 18-417
Cow position: chr14:48254875-48254477 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 110

Conread position: 18-461
Cow position: chr14:30585499-30585061 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 18-462
Cow position: chr14:16920245-16919799 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 38

Conread position: 18-462
Cow position: chr14:17001618-17001168 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-465
Cow position: chr14:33394339-33393882 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 149

Conread position: 18-469
Cow position: chr14:17684832-17685295 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 203

Conread position: 18-469
Cow position: chr14:50110017-50110464 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 81

Conread position: 18-471
Cow position: chr14:750006-750470 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-471
Cow position: chr14:9045002-9045466 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-471
Cow position: chr14:17492020-17491556 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-471
Cow position: chr14:22018842-22019291 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 6

Conread position: 18-471
Cow position: chr14:23901364-23900900 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-471
Cow position: chr14:35387696-35387250 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 110

Conread position: 18-471
Cow position: chr14:38532858-38532392 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 204

Conread position: 18-471
Cow position: chr14:45672608-45672145 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 363

Conread position: 18-471
Cow position: chr14:45767443-45767902 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 205

Conread position: 18-472
Cow position: chr14:13272695-13273148 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 180

Conread position: 18-472
Cow position: chr14:15277141-15276679 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 107

Conread position: 18-472
Cow position: chr14:20781893-20782357 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-472
Cow position: chr14:22032245-22031786 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 80

Conread position: 18-472
Cow position: chr14:23260493-23260027 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 105

Conread position: 18-472
Cow position: chr14:28994418-28993953 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 203

Conread position: 18-472
Cow position: chr14:37223339-37223802 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 205

Conread position: 18-477
Cow position: chr14:7831102-7830632 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 108

Conread position: 19-274
Cow position: chr14:13622173-13621915 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 201

Conread position: 19-469
Cow position: chr14:44685486-44685941 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 116

Conread position: 20-277
Cow position: chr14:45160304-45160546 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 72, 161

Conread position: 20-371
Cow position: chr14:45079975-45080313 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 9

Conread position: 20-462
Cow position: chr14:47589316-47589758 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 6

Conread position: 20-472
Cow position: chr14:7471817-7472269 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 9

Conread position: 21-340
Cow position: chr14:11468041-11468347 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 182, 7

Conread position: 21-400
Cow position: chr14:43552862-43553243 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 268
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 7, 104

Conread position: 21-471
Cow position: chr14:30596935-30596484 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 20

Conread position: 21-471
Cow position: chr14:46464509-46464972 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 201

Conread position: 22-467
Cow position: chr14:12608651-12609075 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 309
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 6

Conread position: 23-472
Cow position: chr14:13302475-13302929 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 6

Conread position: 23-472
Cow position: chr14:44376880-44377338 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 6

Conread position: 24-471
Cow position: chr14:44130364-44130813 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 100

Conread position: 27-212
Cow position: chr14:48824061-48824247 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 8, 97

Conread position: 27-471
Cow position: chr14:13660540-13660086 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 81

Conread position: 29-472
Cow position: chr14:16273847-16273395 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 191

Conread position: 41-471
Cow position: chr14:30707207-30706791 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 279
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 172

Conread position: 52-455
Cow position: chr14:31887150-31887554 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 274
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 72

Conread position: 56-265
Cow position: chr14:44580397-44580606 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 122

Conread position: 67-471
Cow position: chr14:41085296-41084881 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 158

Conread position: 70-472
Cow position: chr14:13778456-13778856 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 56

Conread position: 80-469
Cow position: chr14:13864582-13864184 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 28

Conread position: 105-471
Cow position: chr14:5201531-5201181 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 235, 18

Conread position: 107-464
Cow position: chr14:41407349-41407708 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 115

Conread position: 124-471
Cow position: chr14:22242430-22242781 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 17

Conread position: 129-469
Cow position: chr14:45916966-45917316 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 32

Conread position: 129-477
Cow position: chr14:37414339-37413980 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 298

Conread position: 137-472
Cow position: chr14:13480170-13479833 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 63

Conread position: 158-471
Cow position: chr14:19619804-19620120 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 47

Conread position: 192-477
Cow position: chr14:44551497-44551790 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 53

Conread position: 201-462
Cow position: chr14:5511446-5511713 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 21

Conread position: 215-471
Cow position: chr14:45771137-45770879 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 33

Conread position: 230-462
Cow position: chr14:34775179-34775417 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 50, 201

Conread position: 237-442
Cow position: chr14:48824237-48824454 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 263-477
Cow position: chr14:44580641-44580858 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 16

Conread position: 284-471
Cow position: chr14:33675517-33675712 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 53, 5

Conread position: 299-472
Cow position: chr14:13621428-13621246 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 313-462
Cow position: chr14:45565063-45565219 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 27, 12

Conread position: 314-469
Cow position: chr14:12743333-12743170 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 111

Show alignments to all cow chromosomes.