Cow genome map

Conread name: Pig1-34D03

Conread position: 2-471
Cow position: chr16:34529400-34529875 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 171

Conread position: 8-471
Cow position: chr16:6942704-6943186 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 213

Conread position: 10-468
Cow position: chr16:10437341-10437795 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 14

Conread position: 13-472
Cow position: chr16:8817018-8816549 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 42

Conread position: 15-471
Cow position: chr16:39820724-39821184 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 162

Conread position: 16-153
Cow position: chr16:7676607-7676470 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 109

Conread position: 16-191
Cow position: chr16:49236028-49235850 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 149

Conread position: 16-287
Cow position: chr16:52815540-52815275 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 77, 21

Conread position: 16-301
Cow position: chr16:29676219-29675934 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 144

Conread position: 16-316
Cow position: chr16:18688042-18687734 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 104

Conread position: 16-351
Cow position: chr16:5888569-5888892 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 112

Conread position: 16-403
Cow position: chr16:36232518-36232136 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 112

Conread position: 16-462
Cow position: chr16:335391-335834 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 12

Conread position: 16-462
Cow position: chr16:28171272-28170818 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 72

Conread position: 16-469
Cow position: chr16:2484050-2483590 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 168

Conread position: 16-469
Cow position: chr16:15183893-15184355 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 35

Conread position: 16-469
Cow position: chr16:47562778-47563243 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 13

Conread position: 16-469
Cow position: chr16:56551215-56551672 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 121

Conread position: 16-471
Cow position: chr16:2239644-2239186 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 124

Conread position: 16-471
Cow position: chr16:6549435-6548970 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 112

Conread position: 16-471
Cow position: chr16:7905729-7906173 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 85

Conread position: 16-471
Cow position: chr16:10808253-10808704 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 81

Conread position: 16-471
Cow position: chr16:11052259-11052714 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 12

Conread position: 16-471
Cow position: chr16:20255224-20254757 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 206

Conread position: 16-471
Cow position: chr16:25157130-25156669 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 110

Conread position: 16-471
Cow position: chr16:28438695-28438232 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 307
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 23, 182

Conread position: 16-471
Cow position: chr16:36362261-36361808 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 111

Conread position: 16-471
Cow position: chr16:49257481-49257029 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 15

Conread position: 16-472
Cow position: chr16:25341058-25341520 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 94

Conread position: 16-472
Cow position: chr16:26662837-26663304 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 205

Conread position: 16-477
Cow position: chr16:42740335-42739863 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 78

Conread position: 17-360
Cow position: chr16:56164893-56165237 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 228
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 9

Conread position: 17-472
Cow position: chr16:5483415-5483878 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 7

Conread position: 18-193
Cow position: chr16:16687964-16688138 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 106

Conread position: 18-246
Cow position: chr16:23670502-23670275 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 123

Conread position: 18-247
Cow position: chr16:24881596-24881368 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 10, 49

Conread position: 18-325
Cow position: chr16:1430319-1430623 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 80

Conread position: 18-393
Cow position: chr16:40887166-40886791 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 111

Conread position: 18-462
Cow position: chr16:407940-407486 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 124

Conread position: 18-462
Cow position: chr16:836124-836574 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 6

Conread position: 18-462
Cow position: chr16:28472004-28471556 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 251

Conread position: 18-462
Cow position: chr16:40297081-40296633 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 6

Conread position: 18-464
Cow position: chr16:27734713-27734255 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-469
Cow position: chr16:10204319-10203878 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 6

Conread position: 18-469
Cow position: chr16:15565845-15566296 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 6

Conread position: 18-469
Cow position: chr16:25084714-25085173 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 107

Conread position: 18-471
Cow position: chr16:31840-32292 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 162

Conread position: 18-471
Cow position: chr16:5660952-5661404 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 136

Conread position: 18-471
Cow position: chr16:5918576-5919037 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-471
Cow position: chr16:25187733-25188196 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 206

Conread position: 18-471
Cow position: chr16:36282493-36282951 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 93

Conread position: 18-472
Cow position: chr16:2411878-2411414 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 107

Conread position: 18-472
Cow position: chr16:2728221-2727733 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 36

Conread position: 18-472
Cow position: chr16:15491801-15492264 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 11

Conread position: 18-472
Cow position: chr16:23253412-23252952 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 95

Conread position: 18-472
Cow position: chr16:23982403-23982865 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 145

Conread position: 18-472
Cow position: chr16:29046112-29046577 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-472
Cow position: chr16:31592812-31592352 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 6

Conread position: 18-472
Cow position: chr16:43898177-43897716 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 20-329
Cow position: chr16:32605921-32606233 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 201

Conread position: 20-403
Cow position: chr16:11111845-11111463 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 106

Conread position: 21-291
Cow position: chr16:29091889-29091621 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 7, 147

Conread position: 21-385
Cow position: chr16:26650529-26650889 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 7, 46

Conread position: 21-472
Cow position: chr16:1568359-1567899 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 104

Conread position: 23-327
Cow position: chr16:44388482-44388175 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 66, 201

Conread position: 23-472
Cow position: chr16:25440717-25441179 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 6

Conread position: 23-472
Cow position: chr16:25458372-25457910 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 6

Conread position: 24-462
Cow position: chr16:51685532-51685980 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 188

Conread position: 24-469
Cow position: chr16:12538825-12538373 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 5

Conread position: 24-471
Cow position: chr16:9929645-9930092 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 9

Conread position: 27-327
Cow position: chr16:54647428-54647719 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 65, 170

Conread position: 27-357
Cow position: chr16:16276403-16276074 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 97

Conread position: 29-370
Cow position: chr16:4303367-4303031 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 79

Conread position: 31-447
Cow position: chr16:42051266-42050857 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 69

Conread position: 41-462
Cow position: chr16:14666715-14666284 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 179

Conread position: 42-199
Cow position: chr16:4441988-4442149 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 42-400
Cow position: chr16:5651868-5652215 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 95

Conread position: 42-400
Cow position: chr16:24155328-24154968 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 158

Conread position: 42-471
Cow position: chr16:31376139-31375728 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 55

Conread position: 88-471
Cow position: chr16:16029950-16030338 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 256
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 261, 153

Conread position: 106-300
Cow position: chr16:29032340-29032534 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 94, 115

Conread position: 117-471
Cow position: chr16:19713691-19713335 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 42

Conread position: 126-471
Cow position: chr16:32935360-32935728 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 95

Conread position: 140-383
Cow position: chr16:51448930-51449169 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 200, 63

Conread position: 161-469
Cow position: chr16:9777319-9777637 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 21

Conread position: 226-471
Cow position: chr16:53045654-53045908 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 204

Conread position: 235-396
Cow position: chr16:45797513-45797675 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 73

Conread position: 258-471
Cow position: chr16:18500014-18499799 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 83, 32

Conread position: 258-471
Cow position: chr16:31831964-31832186 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 172

Conread position: 288-471
Cow position: chr16:52815124-52814937 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 54, 138

Conread position: 305-471
Cow position: chr16:29033097-29033271 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 98, 0

Show alignments to all cow chromosomes.