Cow genome map

Conread name: Pig1-34D03

Conread position: 8-461
Cow position: chr19:170870-170413 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 117

Conread position: 10-297
Cow position: chr19:29209436-29209721 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 14

Conread position: 16-240
Cow position: chr19:561630-561403 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 206

Conread position: 16-240
Cow position: chr19:28376406-28376627 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 80

Conread position: 16-300
Cow position: chr19:20111345-20111071 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 108

Conread position: 16-364
Cow position: chr19:20125499-20125838 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 109

Conread position: 16-371
Cow position: chr19:30372157-30372511 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 208

Conread position: 16-400
Cow position: chr19:15042043-15042424 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 250
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 90, 76

Conread position: 16-467
Cow position: chr19:40887768-40887316 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 12

Conread position: 16-471
Cow position: chr19:37775-38239 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 6

Conread position: 16-471
Cow position: chr19:76360-75925 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 15

Conread position: 16-471
Cow position: chr19:1031984-1032419 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 82

Conread position: 16-471
Cow position: chr19:10517228-10516759 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 316
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 17, 113

Conread position: 16-471
Cow position: chr19:32212192-32211729 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 205

Conread position: 16-471
Cow position: chr19:43143594-43144060 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 205

Conread position: 16-472
Cow position: chr19:39390396-39390853 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 167

Conread position: 16-477
Cow position: chr19:15953736-15954189 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 6

Conread position: 16-477
Cow position: chr19:32665408-32665874 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 52

Conread position: 17-264
Cow position: chr19:4532867-4532625 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 107

Conread position: 17-358
Cow position: chr19:34300-34640 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 201

Conread position: 17-447
Cow position: chr19:39688420-39688847 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 36

Conread position: 17-477
Cow position: chr19:416529-417012 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 222

Conread position: 18-267
Cow position: chr19:32193457-32193711 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 10, 0

Conread position: 18-279
Cow position: chr19:27052883-27052625 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 20

Conread position: 18-351
Cow position: chr19:55078626-55078963 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-358
Cow position: chr19:27212064-27212402 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 219
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 27

Conread position: 18-396
Cow position: chr19:31341586-31341984 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-445
Cow position: chr19:32244563-32245002 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 204

Conread position: 18-465
Cow position: chr19:28593157-28593601 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 205

Conread position: 18-466
Cow position: chr19:772479-772937 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-469
Cow position: chr19:172091-172553 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-469
Cow position: chr19:7488193-7488655 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-469
Cow position: chr19:40852550-40852096 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 164

Conread position: 18-471
Cow position: chr19:7341948-7342412 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-471
Cow position: chr19:39546505-39546955 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 206

Conread position: 18-472
Cow position: chr19:203844-204306 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 106

Conread position: 18-472
Cow position: chr19:439763-439312 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 164

Conread position: 18-472
Cow position: chr19:4385368-4385814 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 7

Conread position: 18-472
Cow position: chr19:10672426-10671961 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-472
Cow position: chr19:28581774-28581314 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 107

Conread position: 18-472
Cow position: chr19:33941492-33941955 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-477
Cow position: chr19:42248695-42249155 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 116

Conread position: 19-206
Cow position: chr19:4252475-4252289 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 71, 9

Conread position: 20-350
Cow position: chr19:543742-543410 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 24

Conread position: 20-472
Cow position: chr19:33873311-33873771 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 9

Conread position: 21-382
Cow position: chr19:359621-359260 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 7, 200

Conread position: 21-471
Cow position: chr19:30755060-30755513 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 150

Conread position: 24-462
Cow position: chr19:893726-893280 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 196

Conread position: 24-471
Cow position: chr19:32223551-32223104 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 5

Conread position: 32-429
Cow position: chr19:261330-261737 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 90

Conread position: 39-442
Cow position: chr19:350381-349976 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 183

Conread position: 42-471
Cow position: chr19:6553518-6553944 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 82

Conread position: 70-316
Cow position: chr19:18728790-18729031 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 19, 99

Conread position: 81-356
Cow position: chr19:32237736-32237460 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 43

Conread position: 140-471
Cow position: chr19:687070-687407 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 21

Conread position: 161-461
Cow position: chr19:35376820-35377115 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 36

Conread position: 161-471
Cow position: chr19:20104738-20105057 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 19

Conread position: 161-471
Cow position: chr19:52151806-52151486 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 61

Conread position: 172-468
Cow position: chr19:2274338-2274036 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 35

Conread position: 237-471
Cow position: chr19:42649010-42648770 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 293-471
Cow position: chr19:28376642-28376830 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 134

Conread position: 293-471
Cow position: chr19:40817545-40817359 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 55

Conread position: 298-471
Cow position: chr19:29209762-29209941 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 107, 47

Conread position: 303-472
Cow position: chr19:5728996-5729174 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 0

Show alignments to all cow chromosomes.