Cow genome map
Conread name: | Pig1-34D03 |
Conread position: | 8-461 |
Cow position: | chr19:170870-170413 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 117 |
Conread position: | 10-297 |
Cow position: | chr19:29209436-29209721 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 14 |
Conread position: | 16-240 |
Cow position: | chr19:561630-561403 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 159 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 23, 206 |
Conread position: | 16-240 |
Cow position: | chr19:28376406-28376627 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 174 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 13, 80 |
Conread position: | 16-300 |
Cow position: | chr19:20111345-20111071 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 190 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 71, 108 |
Conread position: | 16-364 |
Cow position: | chr19:20125499-20125838 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 109 |
Conread position: | 16-371 |
Cow position: | chr19:30372157-30372511 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 208 |
Conread position: | 16-400 |
Cow position: | chr19:15042043-15042424 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 250 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 90, 76 |
Conread position: | 16-467 |
Cow position: | chr19:40887768-40887316 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 12 |
Conread position: | 16-471 |
Cow position: | chr19:37775-38239 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 6 |
Conread position: | 16-471 |
Cow position: | chr19:76360-75925 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 330, 15 |
Conread position: | 16-471 |
Cow position: | chr19:1031984-1032419 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 82 |
Conread position: | 16-471 |
Cow position: | chr19:10517228-10516759 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 316 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 17, 113 |
Conread position: | 16-471 |
Cow position: | chr19:32212192-32211729 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 205 |
Conread position: | 16-471 |
Cow position: | chr19:43143594-43144060 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 205 |
Conread position: | 16-472 |
Cow position: | chr19:39390396-39390853 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 167 |
Conread position: | 16-477 |
Cow position: | chr19:15953736-15954189 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 6 |
Conread position: | 16-477 |
Cow position: | chr19:32665408-32665874 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 52 |
Conread position: | 17-264 |
Cow position: | chr19:4532867-4532625 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 107 |
Conread position: | 17-358 |
Cow position: | chr19:34300-34640 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 201 |
Conread position: | 17-447 |
Cow position: | chr19:39688420-39688847 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 36 |
Conread position: | 17-477 |
Cow position: | chr19:416529-417012 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 222 |
Conread position: | 18-267 |
Cow position: | chr19:32193457-32193711 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 187 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 18-279 |
Cow position: | chr19:27052883-27052625 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 20 |
Conread position: | 18-351 |
Cow position: | chr19:55078626-55078963 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-358 |
Cow position: | chr19:27212064-27212402 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 219 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 21, 27 |
Conread position: | 18-396 |
Cow position: | chr19:31341586-31341984 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-445 |
Cow position: | chr19:32244563-32245002 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 204 |
Conread position: | 18-465 |
Cow position: | chr19:28593157-28593601 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 205 |
Conread position: | 18-466 |
Cow position: | chr19:772479-772937 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-469 |
Cow position: | chr19:172091-172553 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-469 |
Cow position: | chr19:7488193-7488655 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-469 |
Cow position: | chr19:40852550-40852096 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 164 |
Conread position: | 18-471 |
Cow position: | chr19:7341948-7342412 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-471 |
Cow position: | chr19:39546505-39546955 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 206 |
Conread position: | 18-472 |
Cow position: | chr19:203844-204306 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 106 |
Conread position: | 18-472 |
Cow position: | chr19:439763-439312 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 164 |
Conread position: | 18-472 |
Cow position: | chr19:4385368-4385814 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 7 |
Conread position: | 18-472 |
Cow position: | chr19:10672426-10671961 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-472 |
Cow position: | chr19:28581774-28581314 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 107 |
Conread position: | 18-472 |
Cow position: | chr19:33941492-33941955 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-477 |
Cow position: | chr19:42248695-42249155 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 116 |
Conread position: | 19-206 |
Cow position: | chr19:4252475-4252289 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 148 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 71, 9 |
Conread position: | 20-350 |
Cow position: | chr19:543742-543410 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 24 |
Conread position: | 20-472 |
Cow position: | chr19:33873311-33873771 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 9 |
Conread position: | 21-382 |
Cow position: | chr19:359621-359260 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 254 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 7, 200 |
Conread position: | 21-471 |
Cow position: | chr19:30755060-30755513 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 150 |
Conread position: | 24-462 |
Cow position: | chr19:893726-893280 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 196 |
Conread position: | 24-471 |
Cow position: | chr19:32223551-32223104 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 5 |
Conread position: | 32-429 |
Cow position: | chr19:261330-261737 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 90 |
Conread position: | 39-442 |
Cow position: | chr19:350381-349976 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 183 |
Conread position: | 42-471 |
Cow position: | chr19:6553518-6553944 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 82 |
Conread position: | 70-316 |
Cow position: | chr19:18728790-18729031 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 173 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 19, 99 |
Conread position: | 81-356 |
Cow position: | chr19:32237736-32237460 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 43 |
Conread position: | 140-471 |
Cow position: | chr19:687070-687407 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 21 |
Conread position: | 161-461 |
Cow position: | chr19:35376820-35377115 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 36 |
Conread position: | 161-471 |
Cow position: | chr19:20104738-20105057 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 19 |
Conread position: | 161-471 |
Cow position: | chr19:52151806-52151486 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 61 |
Conread position: | 172-468 |
Cow position: | chr19:2274338-2274036 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 35 |
Conread position: | 237-471 |
Cow position: | chr19:42649010-42648770 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 293-471 |
Cow position: | chr19:28376642-28376830 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 152 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 49, 134 |
Conread position: | 293-471 |
Cow position: | chr19:40817545-40817359 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 138 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 43, 55 |
Conread position: | 298-471 |
Cow position: | chr19:29209762-29209941 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 139 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 107, 47 |
Conread position: | 303-472 |
Cow position: | chr19:5728996-5729174 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 133 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.