Cow genome map
| Conread name: | Pig1-34D03 |
| Conread position: | 6-469 |
| Cow position: | chr20:15291845-15292309 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 19 |
| Conread position: | 10-204 |
| Cow position: | chr20:24390205-24390388 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 11-472 |
| Cow position: | chr20:27869027-27869499 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 210 |
| Conread position: | 15-471 |
| Cow position: | chr20:18315748-18315306 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 34 |
| Conread position: | 15-472 |
| Cow position: | chr20:5534773-5535239 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 151 |
| Conread position: | 16-275 |
| Cow position: | chr20:4799813-4799554 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 8 |
| Conread position: | 16-276 |
| Cow position: | chr20:10102713-10102461 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 187 |
| Conread position: | 16-279 |
| Cow position: | chr20:35973581-35973308 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 212 |
| Conread position: | 16-286 |
| Cow position: | chr20:22717859-22717586 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 73, 219 |
| Conread position: | 16-288 |
| Cow position: | chr20:7085740-7085470 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 16-465 |
| Cow position: | chr20:13665364-13664921 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 16-469 |
| Cow position: | chr20:13762738-13763203 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 204 |
| Conread position: | 16-471 |
| Cow position: | chr20:3270549-3271005 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 23 |
| Conread position: | 16-471 |
| Cow position: | chr20:8313601-8313139 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 203 |
| Conread position: | 16-471 |
| Cow position: | chr20:24614382-24614836 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 68 |
| Conread position: | 17-311 |
| Cow position: | chr20:21393406-21393697 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 17-471 |
| Cow position: | chr20:2791509-2791041 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 318 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 18-169 |
| Cow position: | chr20:35119162-35119314 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 18-202 |
| Cow position: | chr20:19192291-19192105 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 18-245 |
| Cow position: | chr20:10846241-10846010 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 18-283 |
| Cow position: | chr20:29572349-29572088 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 69, 179 |
| Conread position: | 18-369 |
| Cow position: | chr20:11679273-11678918 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-457 |
| Cow position: | chr20:31379046-31378601 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 108 |
| Conread position: | 18-462 |
| Cow position: | chr20:25851153-25850699 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 164 |
| Conread position: | 18-462 |
| Cow position: | chr20:30684176-30684612 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 18-471 |
| Cow position: | chr20:5560878-5560414 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-471 |
| Cow position: | chr20:15064606-15065066 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 202 |
| Conread position: | 18-471 |
| Cow position: | chr20:37579298-37579726 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 324, 72 |
| Conread position: | 18-472 |
| Cow position: | chr20:8004386-8003924 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 11 |
| Conread position: | 18-472 |
| Cow position: | chr20:12438924-12438459 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 203 |
| Conread position: | 18-472 |
| Cow position: | chr20:21914163-21914629 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 18-472 |
| Cow position: | chr20:23469822-23469364 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-472 |
| Cow position: | chr20:23798719-23799187 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-472 |
| Cow position: | chr20:35119411-35119871 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 203 |
| Conread position: | 18-473 |
| Cow position: | chr20:29948355-29948802 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 72 |
| Conread position: | 18-477 |
| Cow position: | chr20:5484030-5484499 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 6 |
| Conread position: | 18-477 |
| Cow position: | chr20:7116633-7116161 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 204 |
| Conread position: | 19-477 |
| Cow position: | chr20:3252298-3251826 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 109 |
| Conread position: | 20-461 |
| Cow position: | chr20:28160620-28161061 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 79 |
| Conread position: | 20-471 |
| Cow position: | chr20:22206388-22206837 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 44 |
| Conread position: | 21-359 |
| Cow position: | chr20:24516872-24517213 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 16, 146 |
| Conread position: | 21-460 |
| Cow position: | chr20:15098036-15097587 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 21-462 |
| Cow position: | chr20:28565755-28565304 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 199 |
| Conread position: | 26-471 |
| Cow position: | chr20:19437804-19438241 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 127 |
| Conread position: | 27-198 |
| Cow position: | chr20:28593594-28593765 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 5, 98 |
| Conread position: | 27-450 |
| Cow position: | chr20:9954137-9953706 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 98 |
| Conread position: | 38-471 |
| Cow position: | chr20:822625-823068 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 182 |
| Conread position: | 51-333 |
| Cow position: | chr20:2676988-2677270 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 54-471 |
| Cow position: | chr20:15947519-15947079 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 166 |
| Conread position: | 65-471 |
| Cow position: | chr20:28463371-28463775 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 68-471 |
| Cow position: | chr20:25960991-25961404 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 152 |
| Conread position: | 80-477 |
| Cow position: | chr20:3032964-3033370 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 44 |
| Conread position: | 86-471 |
| Cow position: | chr20:13680150-13679757 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 97 |
| Conread position: | 140-471 |
| Cow position: | chr20:3684524-3684187 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 82 |
| Conread position: | 232-474 |
| Cow position: | chr20:10856978-10856731 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 97, 75 |
| Conread position: | 284-477 |
| Cow position: | chr20:10846011-10845814 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 12 |
Show alignments to all cow chromosomes.