Cow genome map
Conread name: | Pig1-34D03 |
Conread position: | 6-471 |
Cow position: | chr21:2674682-2674192 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 24 |
Conread position: | 13-467 |
Cow position: | chr21:4590037-4589576 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 16 |
Conread position: | 15-353 |
Cow position: | chr21:2769509-2769166 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 207 |
Conread position: | 16-192 |
Cow position: | chr21:17572875-17573053 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 134 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 16-312 |
Cow position: | chr21:2716730-2716429 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 112 |
Conread position: | 16-397 |
Cow position: | chr21:21947850-21947465 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 262 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 17, 184 |
Conread position: | 16-403 |
Cow position: | chr21:4222736-4222348 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 208 |
Conread position: | 16-434 |
Cow position: | chr21:3426440-3426868 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 411 |
Conread position: | 16-460 |
Cow position: | chr21:23860734-23861187 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 156 |
Conread position: | 16-462 |
Cow position: | chr21:2510606-2511062 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 120 |
Conread position: | 16-462 |
Cow position: | chr21:30599964-30599515 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 39 |
Conread position: | 16-469 |
Cow position: | chr21:3778719-3779184 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 206 |
Conread position: | 16-471 |
Cow position: | chr21:4076799-4077257 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 126 |
Conread position: | 16-471 |
Cow position: | chr21:7267585-7267117 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 13 |
Conread position: | 16-471 |
Cow position: | chr21:12056046-12055581 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 153 |
Conread position: | 16-471 |
Cow position: | chr21:13124044-13123586 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 145 |
Conread position: | 16-471 |
Cow position: | chr21:26823276-26822814 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 307 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 74, 29 |
Conread position: | 16-471 |
Cow position: | chr21:34292970-34293435 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 112 |
Conread position: | 16-471 |
Cow position: | chr21:35596319-35596786 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 208 |
Conread position: | 16-472 |
Cow position: | chr21:10566629-10567089 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 39 |
Conread position: | 16-472 |
Cow position: | chr21:48116059-48116522 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 185 |
Conread position: | 16-476 |
Cow position: | chr21:20744798-20744342 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 29 |
Conread position: | 17-471 |
Cow position: | chr21:11453701-11453236 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 204 |
Conread position: | 18-213 |
Cow position: | chr21:1190998-1191203 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 149 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 18-259 |
Cow position: | chr21:27708718-27708963 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 181 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 10, 204 |
Conread position: | 18-300 |
Cow position: | chr21:3615248-3615534 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-324 |
Cow position: | chr21:33251348-33251657 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-393 |
Cow position: | chr21:33755261-33755636 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 111 |
Conread position: | 18-462 |
Cow position: | chr21:10850036-10850490 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-469 |
Cow position: | chr21:31559699-31559238 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 171 |
Conread position: | 18-470 |
Cow position: | chr21:2530170-2529709 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 215 |
Conread position: | 18-470 |
Cow position: | chr21:46915543-46916007 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 207 |
Conread position: | 18-471 |
Cow position: | chr21:2416192-2416638 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 10 |
Conread position: | 18-471 |
Cow position: | chr21:2476554-2476121 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 107 |
Conread position: | 18-471 |
Cow position: | chr21:2789038-2788573 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 204 |
Conread position: | 18-471 |
Cow position: | chr21:4090607-4091069 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 107 |
Conread position: | 18-471 |
Cow position: | chr21:4456785-4457246 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 33 |
Conread position: | 18-471 |
Cow position: | chr21:11505545-11506016 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 6 |
Conread position: | 18-471 |
Cow position: | chr21:23811832-23812295 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-471 |
Cow position: | chr21:26638507-26638045 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 107 |
Conread position: | 18-471 |
Cow position: | chr21:37044869-37045330 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-471 |
Cow position: | chr21:39425019-39425483 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 206 |
Conread position: | 18-472 |
Cow position: | chr21:145875-146343 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 207 |
Conread position: | 18-472 |
Cow position: | chr21:30561758-30562223 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 20-403 |
Cow position: | chr21:47939442-47939816 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 26 |
Conread position: | 21-289 |
Cow position: | chr21:26819061-26818791 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 199 |
Conread position: | 21-466 |
Cow position: | chr21:2541456-2540998 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 202 |
Conread position: | 21-469 |
Cow position: | chr21:36714591-36715046 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 111 |
Conread position: | 21-471 |
Cow position: | chr21:1292219-1291771 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 105 |
Conread position: | 24-448 |
Cow position: | chr21:47948071-47948505 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 197 |
Conread position: | 25-335 |
Cow position: | chr21:34259256-34258954 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 100 |
Conread position: | 27-471 |
Cow position: | chr21:358983-359453 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 82 |
Conread position: | 29-448 |
Cow position: | chr21:9891571-9892000 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 75 |
Conread position: | 30-474 |
Cow position: | chr21:2883779-2883325 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 190 |
Conread position: | 42-398 |
Cow position: | chr21:13281884-13282232 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 230 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 95, 46 |
Conread position: | 43-469 |
Cow position: | chr21:4183509-4183935 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 22 |
Conread position: | 46-472 |
Cow position: | chr21:27282372-27282806 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 174 |
Conread position: | 48-471 |
Cow position: | chr21:6339553-6339986 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 172 |
Conread position: | 53-403 |
Cow position: | chr21:8678368-8678015 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 167 |
Conread position: | 109-462 |
Cow position: | chr21:40271628-40271266 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 113 |
Conread position: | 161-471 |
Cow position: | chr21:3798270-3797951 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 61 |
Conread position: | 163-469 |
Cow position: | chr21:18820313-18820012 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 57 |
Conread position: | 185-471 |
Cow position: | chr21:2502019-2502310 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 217 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 146, 35 |
Conread position: | 222-469 |
Cow position: | chr21:28967-29187 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 180 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 223-462 |
Cow position: | chr21:1191327-1191574 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 202 |
Conread position: | 236-471 |
Cow position: | chr21:26650218-26650461 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 185 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 104, 193 |
Conread position: | 246-472 |
Cow position: | chr21:30226206-30226440 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 144 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 94, 180 |
Conread position: | 259-472 |
Cow position: | chr21:35143968-35144177 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 161 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 87, 119 |
Conread position: | 303-471 |
Cow position: | chr21:9869995-9870166 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 101, 32 |
Conread position: | 316-470 |
Cow position: | chr21:3615569-3615730 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 132 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 24, 108 |
Conread position: | 322-472 |
Cow position: | chr21:34258727-34258568 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 126 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 24, 104 |
Conread position: | 351-471 |
Cow position: | chr21:2716425-2716298 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 106 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 54, 73 |
Show alignments to all cow chromosomes.