Cow genome map

Conread name: Pig1-34D03

Conread position: 1-471
Cow position: chr22:3278587-3278109 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 153

Conread position: 6-329
Cow position: chr22:12732070-12731754 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 76, 18

Conread position: 8-462
Cow position: chr22:34168105-34168569 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 213

Conread position: 13-462
Cow position: chr22:44933758-44934217 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 208

Conread position: 15-470
Cow position: chr22:16200270-16200720 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 18

Conread position: 16-191
Cow position: chr22:118037-117857 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 16-207
Cow position: chr22:10076970-10076784 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 12, 61

Conread position: 16-272
Cow position: chr22:302204-301947 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 21

Conread position: 16-333
Cow position: chr22:1293718-1293395 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 97

Conread position: 16-438
Cow position: chr22:32485554-32485139 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 81

Conread position: 16-453
Cow position: chr22:31313123-31313570 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 204

Conread position: 16-465
Cow position: chr22:693410-693867 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 149

Conread position: 16-465
Cow position: chr22:44489668-44490128 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 205

Conread position: 16-469
Cow position: chr22:5933201-5932755 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 17

Conread position: 16-469
Cow position: chr22:15851117-15851564 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 54

Conread position: 16-471
Cow position: chr22:327369-326923 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 17

Conread position: 16-471
Cow position: chr22:3306949-3306488 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 12

Conread position: 16-471
Cow position: chr22:5233523-5233058 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 204

Conread position: 16-471
Cow position: chr22:6503892-6503430 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 150

Conread position: 16-471
Cow position: chr22:10910076-10909586 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 303

Conread position: 16-471
Cow position: chr22:13917285-13917750 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 212

Conread position: 16-471
Cow position: chr22:34598454-34598907 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 111

Conread position: 16-471
Cow position: chr22:44369839-44369379 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 190

Conread position: 16-472
Cow position: chr22:39469739-39469275 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 190

Conread position: 17-385
Cow position: chr22:33350949-33351322 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 206

Conread position: 17-472
Cow position: chr22:15314163-15313704 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 7

Conread position: 18-273
Cow position: chr22:6985038-6985296 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-356
Cow position: chr22:37265238-37265581 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 202

Conread position: 18-403
Cow position: chr22:1321394-1321767 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 179

Conread position: 18-403
Cow position: chr22:24949613-24950002 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 18-403
Cow position: chr22:36274592-36274982 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 119

Conread position: 18-414
Cow position: chr22:27386648-27386248 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-442
Cow position: chr22:46635914-46635496 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 10

Conread position: 18-461
Cow position: chr22:44353164-44352726 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 80

Conread position: 18-469
Cow position: chr22:17328956-17328494 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-471
Cow position: chr22:158119-157659 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 205

Conread position: 18-471
Cow position: chr22:536884-537348 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-471
Cow position: chr22:1319179-1319644 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 204

Conread position: 18-471
Cow position: chr22:1878575-1879040 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-471
Cow position: chr22:5672522-5672984 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 10

Conread position: 18-471
Cow position: chr22:11030746-11031207 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 10

Conread position: 18-471
Cow position: chr22:27283832-27284278 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 116

Conread position: 18-471
Cow position: chr22:35672572-35672109 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-472
Cow position: chr22:19143916-19143451 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-472
Cow position: chr22:21589116-21589572 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 79

Conread position: 18-472
Cow position: chr22:27309990-27309525 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-472
Cow position: chr22:31335249-31334790 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 202

Conread position: 18-472
Cow position: chr22:36861747-36861282 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-472
Cow position: chr22:42990955-42991420 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 203

Conread position: 19-461
Cow position: chr22:560915-560468 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 66

Conread position: 19-467
Cow position: chr22:39882394-39881934 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 42

Conread position: 19-469
Cow position: chr22:36183542-36184001 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 209

Conread position: 20-462
Cow position: chr22:18816593-18816147 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 5

Conread position: 20-471
Cow position: chr22:10546432-10546892 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 9

Conread position: 21-403
Cow position: chr22:36267158-36267536 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 122

Conread position: 21-462
Cow position: chr22:41419901-41419456 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 78

Conread position: 21-471
Cow position: chr22:36736550-36737006 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 199

Conread position: 21-471
Cow position: chr22:46853130-46853589 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 18

Conread position: 21-472
Cow position: chr22:7277309-7277766 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 143

Conread position: 24-271
Cow position: chr22:1285140-1284894 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 70, 8

Conread position: 24-465
Cow position: chr22:44609393-44609833 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 50

Conread position: 24-471
Cow position: chr22:1270718-1270288 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 8

Conread position: 24-472
Cow position: chr22:525884-525445 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 9

Conread position: 26-471
Cow position: chr22:8136404-8135954 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 97

Conread position: 27-471
Cow position: chr22:15956902-15956457 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 310
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 51, 85

Conread position: 30-403
Cow position: chr22:8650876-8650513 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 247
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 122

Conread position: 32-471
Cow position: chr22:37131448-37131880 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 92

Conread position: 42-454
Cow position: chr22:307416-307817 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 262
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 33, 144

Conread position: 43-472
Cow position: chr22:4232760-4232340 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 291
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 9, 83

Conread position: 45-471
Cow position: chr22:32348168-32347743 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 80

Conread position: 67-471
Cow position: chr22:36533904-36533494 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 57

Conread position: 70-471
Cow position: chr22:46547828-46547417 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 150

Conread position: 84-469
Cow position: chr22:5307954-5308347 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 22

Conread position: 86-308
Cow position: chr22:45880255-45880036 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 138

Conread position: 86-471
Cow position: chr22:20240988-20240595 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 133

Conread position: 86-476
Cow position: chr22:44475108-44475488 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 60

Conread position: 111-465
Cow position: chr22:46581707-46581347 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 77

Conread position: 113-471
Cow position: chr22:1048291-1048648 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 110

Conread position: 119-471
Cow position: chr22:42771361-42771702 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 100

Conread position: 129-324
Cow position: chr22:13772874-13773066 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 88, 0

Conread position: 136-414
Cow position: chr22:45975880-45976151 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 89, 67

Conread position: 136-471
Cow position: chr22:6020565-6020909 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 86

Conread position: 164-455
Cow position: chr22:44396382-44396681 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 58

Conread position: 189-477
Cow position: chr22:309738-310032 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 18

Conread position: 209-445
Cow position: chr22:8740907-8740686 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 39

Conread position: 224-403
Cow position: chr22:37073221-37073041 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 84

Conread position: 224-471
Cow position: chr22:117854-117595 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 205

Conread position: 252-435
Cow position: chr22:1283629-1283439 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 88, 10

Conread position: 263-465
Cow position: chr22:18027311-18027520 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 73, 62

Conread position: 272-403
Cow position: chr22:31936660-31936528 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 278-471
Cow position: chr22:23853378-23853577 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 10

Conread position: 288-471
Cow position: chr22:38938027-38937836 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 298-457
Cow position: chr22:45879544-45879376 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 39, 129

Conread position: 339-465
Cow position: chr22:1860847-1860980 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 85

Show alignments to all cow chromosomes.