Cow genome map
| Conread name: | Pig1-34D03 |
| Conread position: | 3-410 |
| Cow position: | chr23:3013415-3013825 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 16-200 |
| Cow position: | chr23:8980710-8980525 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 16-213 |
| Cow position: | chr23:19017484-19017676 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 190, 6 |
| Conread position: | 16-234 |
| Cow position: | chr23:22875853-22875632 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 66, 38 |
| Conread position: | 16-342 |
| Cow position: | chr23:16481575-16481263 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 129 |
| Conread position: | 16-400 |
| Cow position: | chr23:13508846-13509222 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 208 |
| Conread position: | 16-403 |
| Cow position: | chr23:34174963-34175351 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 16-447 |
| Cow position: | chr23:5874993-5874559 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 347 |
| Conread position: | 16-468 |
| Cow position: | chr23:20156452-20155972 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 224 |
| Conread position: | 16-469 |
| Cow position: | chr23:7273436-7273876 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 63 |
| Conread position: | 16-469 |
| Cow position: | chr23:15525392-15525855 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 204 |
| Conread position: | 16-471 |
| Cow position: | chr23:4276736-4277202 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 205 |
| Conread position: | 16-471 |
| Cow position: | chr23:5779306-5778840 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 112 |
| Conread position: | 16-471 |
| Cow position: | chr23:19332618-19332162 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 128 |
| Conread position: | 16-472 |
| Cow position: | chr23:3881916-3881457 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 202 |
| Conread position: | 16-472 |
| Cow position: | chr23:36031590-36031125 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 108 |
| Conread position: | 16-477 |
| Cow position: | chr23:4751792-4752241 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 13, 183 |
| Conread position: | 17-368 |
| Cow position: | chr23:2340182-2340532 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 64 |
| Conread position: | 17-474 |
| Cow position: | chr23:14974779-14974313 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 204 |
| Conread position: | 18-165 |
| Cow position: | chr23:2765595-2765449 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 10, 107 |
| Conread position: | 18-362 |
| Cow position: | chr23:11778271-11778601 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 11 |
| Conread position: | 18-403 |
| Cow position: | chr23:4815856-4816247 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 203 |
| Conread position: | 18-447 |
| Cow position: | chr23:2524412-2523974 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 107 |
| Conread position: | 18-462 |
| Cow position: | chr23:2795778-2795330 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 18-462 |
| Cow position: | chr23:15176858-15177309 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-462 |
| Cow position: | chr23:27399287-27399741 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 18-462 |
| Cow position: | chr23:30636518-30636063 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-469 |
| Cow position: | chr23:16617067-16616601 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 120 |
| Conread position: | 18-469 |
| Cow position: | chr23:28913196-28913640 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 108 |
| Conread position: | 18-471 |
| Cow position: | chr23:988860-988401 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 194 |
| Conread position: | 18-471 |
| Cow position: | chr23:2313454-2312993 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-471 |
| Cow position: | chr23:4359613-4360077 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-471 |
| Cow position: | chr23:4434248-4434703 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 52 |
| Conread position: | 18-471 |
| Cow position: | chr23:19950800-19950336 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 218 |
| Conread position: | 18-471 |
| Cow position: | chr23:20301995-20302459 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 106 |
| Conread position: | 18-471 |
| Cow position: | chr23:31446598-31447062 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-472 |
| Cow position: | chr23:967562-967102 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 18-472 |
| Cow position: | chr23:2027335-2026871 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 202 |
| Conread position: | 18-472 |
| Cow position: | chr23:4640841-4640376 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 203 |
| Conread position: | 18-472 |
| Cow position: | chr23:4888464-4888921 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 166 |
| Conread position: | 18-472 |
| Cow position: | chr23:14965961-14965504 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 18-472 |
| Cow position: | chr23:15220114-15219643 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 196 |
| Conread position: | 18-473 |
| Cow position: | chr23:2757365-2757843 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 11 |
| Conread position: | 19-451 |
| Cow position: | chr23:22147474-22147023 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 210 |
| Conread position: | 20-420 |
| Cow position: | chr23:1025275-1024873 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 20-472 |
| Cow position: | chr23:4509888-4510325 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 20-472 |
| Cow position: | chr23:19489325-19489790 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 29-471 |
| Cow position: | chr23:28217086-28217537 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 193 |
| Conread position: | 42-476 |
| Cow position: | chr23:38578100-38578528 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 47 |
| Conread position: | 43-394 |
| Cow position: | chr23:6216384-6216733 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 193 |
| Conread position: | 53-471 |
| Cow position: | chr23:31591988-31591555 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 106 |
| Conread position: | 61-471 |
| Cow position: | chr23:25684231-25683817 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 119 |
| Conread position: | 105-469 |
| Cow position: | chr23:29474681-29474318 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 66 |
| Conread position: | 124-471 |
| Cow position: | chr23:1327569-1327227 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 98 |
| Conread position: | 137-471 |
| Cow position: | chr23:10903436-10903784 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 152-472 |
| Cow position: | chr23:2716309-2716636 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 70 |
| Conread position: | 178-462 |
| Cow position: | chr23:31595292-31594998 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 178-472 |
| Cow position: | chr23:2574481-2574783 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 224-471 |
| Cow position: | chr23:8980318-8980074 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 179, 50 |
| Conread position: | 245-471 |
| Cow position: | chr23:16615981-16615752 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 281-471 |
| Cow position: | chr23:29452270-29452071 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 282-471 |
| Cow position: | chr23:2765403-2765206 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 159 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 351-471 |
| Cow position: | chr23:31650790-31650671 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
Show alignments to all cow chromosomes.