Cow genome map
| Conread name: | Pig1-34D03 |
| Conread position: | 2-465 |
| Cow position: | chr24:16084807-16084332 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 219 |
| Conread position: | 11-471 |
| Cow position: | chr24:33739479-33739007 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 13 |
| Conread position: | 15-466 |
| Cow position: | chr24:16140946-16141395 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 15-471 |
| Cow position: | chr24:13188051-13188506 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 16-183 |
| Cow position: | chr24:13021536-13021704 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 16-204 |
| Cow position: | chr24:14282740-14282552 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 122 |
| Conread position: | 16-301 |
| Cow position: | chr24:6645282-6645568 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 109 |
| Conread position: | 16-319 |
| Cow position: | chr24:17187410-17187713 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 234 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 19, 85 |
| Conread position: | 16-363 |
| Cow position: | chr24:14390858-14390513 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 65 |
| Conread position: | 16-400 |
| Cow position: | chr24:14873477-14873095 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 91 |
| Conread position: | 16-462 |
| Cow position: | chr24:19833248-19833709 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 205 |
| Conread position: | 16-466 |
| Cow position: | chr24:6335563-6336010 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 16-469 |
| Cow position: | chr24:6352060-6352515 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 298 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 19, 121 |
| Conread position: | 16-469 |
| Cow position: | chr24:12114169-12113717 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 16-471 |
| Cow position: | chr24:6515179-6514719 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 172 |
| Conread position: | 16-471 |
| Cow position: | chr24:12797896-12797436 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 134 |
| Conread position: | 16-471 |
| Cow position: | chr24:14584958-14585409 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 97 |
| Conread position: | 16-471 |
| Cow position: | chr24:16649436-16648984 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 183 |
| Conread position: | 16-471 |
| Cow position: | chr24:22793041-22793505 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 143 |
| Conread position: | 16-471 |
| Cow position: | chr24:35838761-35838287 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 420 |
| Conread position: | 16-472 |
| Cow position: | chr24:12086064-12086532 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 209 |
| Conread position: | 17-245 |
| Cow position: | chr24:12288857-12288630 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 185, 103 |
| Conread position: | 17-250 |
| Cow position: | chr24:13531665-13531432 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 17-468 |
| Cow position: | chr24:15392438-15392010 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 14 |
| Conread position: | 17-471 |
| Cow position: | chr24:36560218-36559754 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 191 |
| Conread position: | 18-299 |
| Cow position: | chr24:2635989-2636270 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-310 |
| Cow position: | chr24:7060971-7061264 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 103 |
| Conread position: | 18-459 |
| Cow position: | chr24:44017415-44017867 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-465 |
| Cow position: | chr24:4415654-4415202 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 48 |
| Conread position: | 18-471 |
| Cow position: | chr24:6025226-6024765 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 190 |
| Conread position: | 18-471 |
| Cow position: | chr24:6145229-6145701 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 18-471 |
| Cow position: | chr24:6434110-6434573 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 292 |
| Conread position: | 18-471 |
| Cow position: | chr24:8030020-8030484 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-471 |
| Cow position: | chr24:9188862-9188399 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-471 |
| Cow position: | chr24:12161748-12162188 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 202 |
| Conread position: | 18-471 |
| Cow position: | chr24:12485448-12484984 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 18-472 |
| Cow position: | chr24:12335923-12335441 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 18-472 |
| Cow position: | chr24:14384742-14384281 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 27 |
| Conread position: | 18-477 |
| Cow position: | chr24:12236923-12237394 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 209 |
| Conread position: | 19-403 |
| Cow position: | chr24:22952006-22952394 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 202 |
| Conread position: | 20-469 |
| Cow position: | chr24:33933239-33933697 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 20-471 |
| Cow position: | chr24:6083888-6084350 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 201 |
| Conread position: | 21-471 |
| Cow position: | chr24:36707724-36708179 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 38 |
| Conread position: | 21-472 |
| Cow position: | chr24:148741-148285 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 66 |
| Conread position: | 23-427 |
| Cow position: | chr24:12131611-12131204 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 6 |
| Conread position: | 23-471 |
| Cow position: | chr24:40548752-40549207 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 26-471 |
| Cow position: | chr24:1447439-1447887 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 27-471 |
| Cow position: | chr24:12568127-12568557 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 26, 97 |
| Conread position: | 28-471 |
| Cow position: | chr24:35841733-35841290 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 31-471 |
| Cow position: | chr24:9092390-9091952 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 189 |
| Conread position: | 58-362 |
| Cow position: | chr24:12224559-12224245 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 69-477 |
| Cow position: | chr24:37216925-37217339 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 231 |
| Conread position: | 73-462 |
| Cow position: | chr24:32331250-32331639 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 274 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 19, 77 |
| Conread position: | 87-477 |
| Cow position: | chr24:6660668-6660258 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 132 |
| Conread position: | 105-302 |
| Cow position: | chr24:14333059-14333253 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 80, 98 |
| Conread position: | 129-472 |
| Cow position: | chr24:17696985-17696644 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 22 |
| Conread position: | 179-472 |
| Cow position: | chr24:29187319-29187617 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 28 |
| Conread position: | 185-477 |
| Cow position: | chr24:7091555-7091254 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 35 |
| Conread position: | 271-465 |
| Cow position: | chr24:6645827-6646030 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 296-471 |
| Cow position: | chr24:7061539-7061722 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 44, 130 |
| Conread position: | 307-471 |
| Cow position: | chr24:5993068-5992896 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 29, 122 |
Show alignments to all cow chromosomes.