Cow genome map


           Conread name:
           Pig1-34D03
        

               Conread position:
               6-349
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 162
               

               Conread position:
               6-400
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               90, 18
               

               Conread position:
               6-471
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 216
               

               Conread position:
               8-471
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 213
               

               Conread position:
               15-471
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 110
               

               Conread position:
               16-153
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               73, 8
               

               Conread position:
               16-212
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               76, 110
               

               Conread position:
               16-241
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               16-323
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 197
               

               Conread position:
               16-464
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 207
               

               Conread position:
               16-469
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 204
               

               Conread position:
               16-469
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 133
               

               Conread position:
               16-469
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 130
               

               Conread position:
               16-471
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 184
               

               Conread position:
               16-471
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 67
               

               Conread position:
               16-471
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               16-471
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 52
               

               Conread position:
               16-471
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 112
               

               Conread position:
               16-472
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 205
               

               Conread position:
               17-472
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 81
               

               Conread position:
               18-180
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               18-181
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               18-181
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               15, 80
               

               Conread position:
               18-193
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               75, 10
               

               Conread position:
               18-369
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 187
               

               Conread position:
               18-442
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 203
               

               Conread position:
               18-457
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 187
               

               Conread position:
               18-462
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 80
               

               Conread position:
               18-462
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 107
               

               Conread position:
               18-462
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 360
               

               Conread position:
               18-463
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 203
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 10
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 74
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 203
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 82
               

               Conread position:
               18-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 164
               

               Conread position:
               18-472
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 202
               

               Conread position:
               18-472
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 206
               

               Conread position:
               18-472
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 107
               

               Conread position:
               18-472
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 203
               

               Conread position:
               18-472
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 203
               

               Conread position:
               18-472
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 11
               

               Conread position:
               18-472
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 107
               

               Conread position:
               18-473
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 40
               

               Conread position:
               20-472
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 9
               

               Conread position:
               21-215
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               71, 8
               

               Conread position:
               21-472
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 8
               

               Conread position:
               21-472
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 75
               

               Conread position:
               23-464
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               23-471
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 75
               

               Conread position:
               23-471
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 164
               

               Conread position:
               24-355
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               179, 29
               

               Conread position:
               25-471
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 83
               

               Conread position:
               27-316
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               27-356
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               8, 99
               

               Conread position:
               27-469
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               302
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               31-326
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               22, 88
               

               Conread position:
               41-462
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 19
               

               Conread position:
               42-213
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               36, 83
               

               Conread position:
               43-412
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               10, 51
               

               Conread position:
               52-471
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 73
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 55
               

               Conread position:
               86-282
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               117, 133
               

               Conread position:
               86-470
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 133
               

               Conread position:
               171-462
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               171-469
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               171-472
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               197-462
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 23
               

               Conread position:
               224-469
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               224-477
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               122, 95
               

               Conread position:
               225-471
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 73
               

               Conread position:
               237-471
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               269-471
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               276-447
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               60, 12
               

               Conread position:
               278-471
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 14
               

               Conread position:
               293-469
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               54, 67
               

               Conread position:
               293-471
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               44, 80
               

               Conread position:
               313-471
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               23, 112
               

               Conread position:
               316-469
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               320-471
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 106
               

               Conread position:
               325-471
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 101
               
Show alignments to all cow chromosomes.