Cow genome map
Conread name: | Pig1-34D03 |
Conread position: | 15-267 |
Cow position: | chr4:1050104-1049856 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 188 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 77, 9 |
Conread position: | 15-471 |
Cow position: | chr4:66925514-66925977 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 157 |
Conread position: | 16-215 |
Cow position: | chr4:12607993-12607790 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 151 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 21, 173 |
Conread position: | 16-268 |
Cow position: | chr4:51044369-51044129 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 175 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 76, 57 |
Conread position: | 16-323 |
Cow position: | chr4:1371499-1371180 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 114 |
Conread position: | 16-397 |
Cow position: | chr4:6215040-6214660 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 207 |
Conread position: | 16-459 |
Cow position: | chr4:1464409-1463956 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 15 |
Conread position: | 16-462 |
Cow position: | chr4:16056118-16056572 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 206 |
Conread position: | 16-462 |
Cow position: | chr4:45049784-45049328 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 204 |
Conread position: | 16-464 |
Cow position: | chr4:355425-355881 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 98 |
Conread position: | 16-465 |
Cow position: | chr4:18425006-18424551 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 205 |
Conread position: | 16-469 |
Cow position: | chr4:3961106-3961569 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 18 |
Conread position: | 16-469 |
Cow position: | chr4:16359402-16359861 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 81 |
Conread position: | 16-469 |
Cow position: | chr4:46663715-46664169 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 74 |
Conread position: | 16-471 |
Cow position: | chr4:602508-602973 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 205 |
Conread position: | 16-471 |
Cow position: | chr4:1931109-1930644 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 88 |
Conread position: | 16-471 |
Cow position: | chr4:34185348-34184904 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 81 |
Conread position: | 16-477 |
Cow position: | chr4:66179475-66179000 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 206 |
Conread position: | 17-272 |
Cow position: | chr4:11383923-11384177 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 183 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 20, 110 |
Conread position: | 17-403 |
Cow position: | chr4:39272425-39272031 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 207 |
Conread position: | 17-471 |
Cow position: | chr4:11618377-11618830 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 80 |
Conread position: | 17-471 |
Cow position: | chr4:17530903-17530451 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 296 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 41, 54 |
Conread position: | 18-200 |
Cow position: | chr4:23114660-23114476 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 139 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 18-201 |
Cow position: | chr4:10408297-10408482 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 146 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 18-316 |
Cow position: | chr4:31668831-31669127 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 38 |
Conread position: | 18-356 |
Cow position: | chr4:33493328-33493666 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 179 |
Conread position: | 18-402 |
Cow position: | chr4:29532198-29531811 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-403 |
Cow position: | chr4:528509-528898 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 203 |
Conread position: | 18-436 |
Cow position: | chr4:4905673-4906091 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 6 |
Conread position: | 18-462 |
Cow position: | chr4:57979147-57979598 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 203 |
Conread position: | 18-469 |
Cow position: | chr4:17926738-17926277 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 149 |
Conread position: | 18-471 |
Cow position: | chr4:101413-100953 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 182 |
Conread position: | 18-471 |
Cow position: | chr4:158032-158495 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 32 |
Conread position: | 18-471 |
Cow position: | chr4:3125297-3125775 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 164 |
Conread position: | 18-471 |
Cow position: | chr4:13547544-13548009 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 204 |
Conread position: | 18-471 |
Cow position: | chr4:21338473-21338023 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 88 |
Conread position: | 18-471 |
Cow position: | chr4:28830556-28831009 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 10 |
Conread position: | 18-471 |
Cow position: | chr4:32211683-32212147 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 203 |
Conread position: | 18-471 |
Cow position: | chr4:47718090-47717627 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 6 |
Conread position: | 18-471 |
Cow position: | chr4:47764654-47764191 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-471 |
Cow position: | chr4:65224018-65223554 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-472 |
Cow position: | chr4:6490830-6490384 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 107 |
Conread position: | 18-472 |
Cow position: | chr4:12241703-12241237 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-472 |
Cow position: | chr4:13492092-13492556 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 203 |
Conread position: | 18-472 |
Cow position: | chr4:18516412-18516877 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-472 |
Cow position: | chr4:24445683-24445226 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 145 |
Conread position: | 18-472 |
Cow position: | chr4:25600096-25599638 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 80 |
Conread position: | 18-472 |
Cow position: | chr4:26887327-26886884 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 107 |
Conread position: | 18-472 |
Cow position: | chr4:33073581-33073129 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 169 |
Conread position: | 18-472 |
Cow position: | chr4:36895890-36896348 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 205 |
Conread position: | 18-472 |
Cow position: | chr4:41330956-41331419 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 188 |
Conread position: | 18-472 |
Cow position: | chr4:43320120-43319666 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 203 |
Conread position: | 18-477 |
Cow position: | chr4:6269112-6268644 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 203 |
Conread position: | 18-477 |
Cow position: | chr4:8598622-8598171 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 80 |
Conread position: | 20-358 |
Cow position: | chr4:12715503-12715842 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 217 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 19, 82 |
Conread position: | 20-402 |
Cow position: | chr4:969519-969141 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 258 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 8, 61 |
Conread position: | 20-471 |
Cow position: | chr4:30307936-30307479 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 184 |
Conread position: | 20-472 |
Cow position: | chr4:43880629-43881089 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 9 |
Conread position: | 20-472 |
Cow position: | chr4:44724603-44725064 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 9 |
Conread position: | 20-472 |
Cow position: | chr4:48025922-48026377 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 9 |
Conread position: | 21-471 |
Cow position: | chr4:5879691-5880145 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 143 |
Conread position: | 24-178 |
Cow position: | chr4:54190377-54190533 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 113 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 24-465 |
Cow position: | chr4:9101864-9102311 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 282 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 8, 207 |
Conread position: | 24-465 |
Cow position: | chr4:27332967-27333409 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 8 |
Conread position: | 77-472 |
Cow position: | chr4:41119590-41119994 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 9 |
Conread position: | 80-471 |
Cow position: | chr4:60264981-60264588 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 24 |
Conread position: | 163-469 |
Cow position: | chr4:12586961-12587276 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 59 |
Conread position: | 172-471 |
Cow position: | chr4:61256568-61256871 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 50 |
Conread position: | 185-471 |
Cow position: | chr4:61716497-61716219 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 194 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 21, 36 |
Conread position: | 204-471 |
Cow position: | chr4:9355065-9354791 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 16 |
Conread position: | 247-403 |
Cow position: | chr4:27443202-27443362 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 127 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 249-471 |
Cow position: | chr4:9587013-9587243 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 173 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 91, 180 |
Conread position: | 258-471 |
Cow position: | chr4:11384718-11384935 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 164 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 73, 164 |
Conread position: | 300-471 |
Cow position: | chr4:10408478-10408653 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 135 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 40, 54 |
Conread position: | 307-471 |
Cow position: | chr4:4415890-4416062 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 128 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 29, 119 |
Show alignments to all cow chromosomes.