Cow genome map

Conread name: Pig1-34D03

Conread position: 15-267
Cow position: chr4:1050104-1049856 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 77, 9

Conread position: 15-471
Cow position: chr4:66925514-66925977 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 157

Conread position: 16-215
Cow position: chr4:12607993-12607790 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 173

Conread position: 16-268
Cow position: chr4:51044369-51044129 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 76, 57

Conread position: 16-323
Cow position: chr4:1371499-1371180 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 114

Conread position: 16-397
Cow position: chr4:6215040-6214660 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 207

Conread position: 16-459
Cow position: chr4:1464409-1463956 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 15

Conread position: 16-462
Cow position: chr4:16056118-16056572 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 206

Conread position: 16-462
Cow position: chr4:45049784-45049328 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 204

Conread position: 16-464
Cow position: chr4:355425-355881 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 98

Conread position: 16-465
Cow position: chr4:18425006-18424551 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 205

Conread position: 16-469
Cow position: chr4:3961106-3961569 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 18

Conread position: 16-469
Cow position: chr4:16359402-16359861 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 81

Conread position: 16-469
Cow position: chr4:46663715-46664169 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 16-471
Cow position: chr4:602508-602973 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 205

Conread position: 16-471
Cow position: chr4:1931109-1930644 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 88

Conread position: 16-471
Cow position: chr4:34185348-34184904 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 81

Conread position: 16-477
Cow position: chr4:66179475-66179000 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 206

Conread position: 17-272
Cow position: chr4:11383923-11384177 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 20, 110

Conread position: 17-403
Cow position: chr4:39272425-39272031 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 207

Conread position: 17-471
Cow position: chr4:11618377-11618830 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 80

Conread position: 17-471
Cow position: chr4:17530903-17530451 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 296
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 41, 54

Conread position: 18-200
Cow position: chr4:23114660-23114476 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 18-201
Cow position: chr4:10408297-10408482 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 0

Conread position: 18-316
Cow position: chr4:31668831-31669127 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 38

Conread position: 18-356
Cow position: chr4:33493328-33493666 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 179

Conread position: 18-402
Cow position: chr4:29532198-29531811 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-403
Cow position: chr4:528509-528898 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-436
Cow position: chr4:4905673-4906091 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 6

Conread position: 18-462
Cow position: chr4:57979147-57979598 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 203

Conread position: 18-469
Cow position: chr4:17926738-17926277 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 149

Conread position: 18-471
Cow position: chr4:101413-100953 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 182

Conread position: 18-471
Cow position: chr4:158032-158495 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 32

Conread position: 18-471
Cow position: chr4:3125297-3125775 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 164

Conread position: 18-471
Cow position: chr4:13547544-13548009 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 204

Conread position: 18-471
Cow position: chr4:21338473-21338023 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 88

Conread position: 18-471
Cow position: chr4:28830556-28831009 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 10

Conread position: 18-471
Cow position: chr4:32211683-32212147 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-471
Cow position: chr4:47718090-47717627 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 6

Conread position: 18-471
Cow position: chr4:47764654-47764191 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-471
Cow position: chr4:65224018-65223554 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-472
Cow position: chr4:6490830-6490384 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 107

Conread position: 18-472
Cow position: chr4:12241703-12241237 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-472
Cow position: chr4:13492092-13492556 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-472
Cow position: chr4:18516412-18516877 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-472
Cow position: chr4:24445683-24445226 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 145

Conread position: 18-472
Cow position: chr4:25600096-25599638 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 80

Conread position: 18-472
Cow position: chr4:26887327-26886884 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 107

Conread position: 18-472
Cow position: chr4:33073581-33073129 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 169

Conread position: 18-472
Cow position: chr4:36895890-36896348 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 205

Conread position: 18-472
Cow position: chr4:41330956-41331419 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 188

Conread position: 18-472
Cow position: chr4:43320120-43319666 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 18-477
Cow position: chr4:6269112-6268644 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 18-477
Cow position: chr4:8598622-8598171 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 80

Conread position: 20-358
Cow position: chr4:12715503-12715842 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 217
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 82

Conread position: 20-402
Cow position: chr4:969519-969141 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 258
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 8, 61

Conread position: 20-471
Cow position: chr4:30307936-30307479 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 184

Conread position: 20-472
Cow position: chr4:43880629-43881089 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 9

Conread position: 20-472
Cow position: chr4:44724603-44725064 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 9

Conread position: 20-472
Cow position: chr4:48025922-48026377 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 9

Conread position: 21-471
Cow position: chr4:5879691-5880145 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 143

Conread position: 24-178
Cow position: chr4:54190377-54190533 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 24-465
Cow position: chr4:9101864-9102311 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 282
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 8, 207

Conread position: 24-465
Cow position: chr4:27332967-27333409 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 8

Conread position: 77-472
Cow position: chr4:41119590-41119994 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 9

Conread position: 80-471
Cow position: chr4:60264981-60264588 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 24

Conread position: 163-469
Cow position: chr4:12586961-12587276 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 59

Conread position: 172-471
Cow position: chr4:61256568-61256871 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 50

Conread position: 185-471
Cow position: chr4:61716497-61716219 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 21, 36

Conread position: 204-471
Cow position: chr4:9355065-9354791 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 16

Conread position: 247-403
Cow position: chr4:27443202-27443362 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 249-471
Cow position: chr4:9587013-9587243 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 91, 180

Conread position: 258-471
Cow position: chr4:11384718-11384935 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 73, 164

Conread position: 300-471
Cow position: chr4:10408478-10408653 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 54

Conread position: 307-471
Cow position: chr4:4415890-4416062 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 119

Show alignments to all cow chromosomes.