Cow genome map
| Conread name: | Pig1-34D03 | 
| Conread position: | 4-471 | 
| Cow position: | chr6:16051627-16052096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 25 | 
| Conread position: | 6-178 | 
| Cow position: | chr6:39907890-39908064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 6-471 | 
| Cow position: | chr6:13846786-13847248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 20 | 
| Conread position: | 9-465 | 
| Cow position: | chr6:1412196-1411730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 164 | 
| Conread position: | 13-215 | 
| Cow position: | chr6:65909174-65909377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 15, 148 | 
| Conread position: | 15-470 | 
| Cow position: | chr6:65927686-65928151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 206 | 
| Conread position: | 16-178 | 
| Cow position: | chr6:65007591-65007748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 74, 23 | 
| Conread position: | 16-199 | 
| Cow position: | chr6:21686643-21686823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 12, 40 | 
| Conread position: | 16-335 | 
| Cow position: | chr6:68362568-68362250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 202 | 
| Conread position: | 16-403 | 
| Cow position: | chr6:16672134-16672521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 11, 196 | 
| Conread position: | 16-437 | 
| Cow position: | chr6:913379-913824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 217 | 
| Conread position: | 16-438 | 
| Cow position: | chr6:11277948-11277513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 12 | 
| Conread position: | 16-457 | 
| Cow position: | chr6:28274735-28275184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 203 | 
| Conread position: | 16-462 | 
| Cow position: | chr6:27530251-27529800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 34 | 
| Conread position: | 16-462 | 
| Cow position: | chr6:33388585-33389048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 94 | 
| Conread position: | 16-469 | 
| Cow position: | chr6:10558898-10558447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 21 | 
| Conread position: | 16-469 | 
| Cow position: | chr6:65841342-65841798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 208 | 
| Conread position: | 16-471 | 
| Cow position: | chr6:2554455-2554922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 208 | 
| Conread position: | 16-471 | 
| Cow position: | chr6:13943662-13944125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 165 | 
| Conread position: | 16-471 | 
| Cow position: | chr6:19453676-19454131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 15 | 
| Conread position: | 16-471 | 
| Cow position: | chr6:26671113-26670642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 205 | 
| Conread position: | 16-471 | 
| Cow position: | chr6:28063089-28063552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 204 | 
| Conread position: | 16-471 | 
| Cow position: | chr6:30478845-30479315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 15 | 
| Conread position: | 16-471 | 
| Cow position: | chr6:44028798-44029255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 205 | 
| Conread position: | 16-471 | 
| Cow position: | chr6:44150810-44150340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 212 | 
| Conread position: | 16-471 | 
| Cow position: | chr6:59919531-59919069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 208 | 
| Conread position: | 16-471 | 
| Cow position: | chr6:68026530-68027008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 425 | 
| Conread position: | 16-472 | 
| Cow position: | chr6:17045812-17046272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 65 | 
| Conread position: | 16-472 | 
| Cow position: | chr6:17598529-17598062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 204 | 
| Conread position: | 16-472 | 
| Cow position: | chr6:27469006-27469464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 12 | 
| Conread position: | 16-472 | 
| Cow position: | chr6:29311242-29311708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 204 | 
| Conread position: | 16-477 | 
| Cow position: | chr6:13276550-13277024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 208 | 
| Conread position: | 17-214 | 
| Cow position: | chr6:39437392-39437593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 17-250 | 
| Cow position: | chr6:1823498-1823264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 11, 149 | 
| Conread position: | 17-419 | 
| Cow position: | chr6:42927135-42927539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 110 | 
| Conread position: | 17-462 | 
| Cow position: | chr6:35876968-35876511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 204 | 
| Conread position: | 17-471 | 
| Cow position: | chr6:33459615-33460079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 204 | 
| Conread position: | 17-474 | 
| Cow position: | chr6:59741300-59740837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 109 | 
| Conread position: | 18-156 | 
| Cow position: | chr6:40275011-40275151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 18-156 | 
| Cow position: | chr6:64714868-64715008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 18-186 | 
| Cow position: | chr6:45672017-45672187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 18-199 | 
| Cow position: | chr6:6476702-6476519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 10, 93 | 
| Conread position: | 18-202 | 
| Cow position: | chr6:13978275-13978458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 10, 107 | 
| Conread position: | 18-202 | 
| Cow position: | chr6:47043679-47043493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 18-215 | 
| Cow position: | chr6:10054367-10054566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 10, 37 | 
| Conread position: | 18-272 | 
| Cow position: | chr6:1384089-1383844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 72, 10 | 
| Conread position: | 18-319 | 
| Cow position: | chr6:50497706-50497402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 203 | 
| Conread position: | 18-340 | 
| Cow position: | chr6:42723172-42722850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 132 | 
| Conread position: | 18-403 | 
| Cow position: | chr6:57870251-57869862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 164 | 
| Conread position: | 18-431 | 
| Cow position: | chr6:35433296-35433706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 19, 180 | 
| Conread position: | 18-462 | 
| Cow position: | chr6:3278198-3277743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 203 | 
| Conread position: | 18-465 | 
| Cow position: | chr6:1405484-1405028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 150 | 
| Conread position: | 18-465 | 
| Cow position: | chr6:34127104-34127563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 40 | 
| Conread position: | 18-466 | 
| Cow position: | chr6:1100830-1100376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 8 | 
| Conread position: | 18-469 | 
| Cow position: | chr6:3889727-3889265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 203 | 
| Conread position: | 18-469 | 
| Cow position: | chr6:13317734-13317284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 204 | 
| Conread position: | 18-469 | 
| Cow position: | chr6:15141422-15140966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 12 | 
| Conread position: | 18-471 | 
| Cow position: | chr6:331713-331253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 105 | 
| Conread position: | 18-471 | 
| Cow position: | chr6:2374459-2374916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 41 | 
| Conread position: | 18-471 | 
| Cow position: | chr6:7141719-7141271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 203 | 
| Conread position: | 18-471 | 
| Cow position: | chr6:13103811-13104274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 51 | 
| Conread position: | 18-471 | 
| Cow position: | chr6:27169329-27169797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 124 | 
| Conread position: | 18-471 | 
| Cow position: | chr6:28491761-28491298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 269 | 
| Conread position: | 18-471 | 
| Cow position: | chr6:38232028-38232493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 301 | 
| Conread position: | 18-471 | 
| Cow position: | chr6:43617469-43617931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 205 | 
| Conread position: | 18-471 | 
| Cow position: | chr6:58409157-58408696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 40 | 
| Conread position: | 18-471 | 
| Cow position: | chr6:65822374-65821910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 203 | 
| Conread position: | 18-472 | 
| Cow position: | chr6:701706-702167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 110 | 
| Conread position: | 18-472 | 
| Cow position: | chr6:3488648-3488182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 203 | 
| Conread position: | 18-472 | 
| Cow position: | chr6:8201488-8201954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 6 | 
| Conread position: | 18-472 | 
| Cow position: | chr6:15280787-15280335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 326, 6 | 
| Conread position: | 18-472 | 
| Cow position: | chr6:20561357-20560895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 203 | 
| Conread position: | 18-472 | 
| Cow position: | chr6:21971426-21971889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 106 | 
| Conread position: | 18-472 | 
| Cow position: | chr6:34893257-34892789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 205 | 
| Conread position: | 18-472 | 
| Cow position: | chr6:36525795-36526263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 203 | 
| Conread position: | 18-472 | 
| Cow position: | chr6:40554840-40554370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 203 | 
| Conread position: | 18-472 | 
| Cow position: | chr6:55544574-55544110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 161 | 
| Conread position: | 18-472 | 
| Cow position: | chr6:65880621-65881084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 11 | 
| Conread position: | 19-340 | 
| Cow position: | chr6:57010104-57009789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 77, 61 | 
| Conread position: | 19-469 | 
| Cow position: | chr6:6566366-6566819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 182 | 
| Conread position: | 20-447 | 
| Cow position: | chr6:44524994-44524576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 77, 6 | 
| Conread position: | 20-457 | 
| Cow position: | chr6:5951480-5951044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 9 | 
| Conread position: | 21-385 | 
| Cow position: | chr6:49520642-49520257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 45 | 
| Conread position: | 21-464 | 
| Cow position: | chr6:41552778-41553218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 205 | 
| Conread position: | 21-465 | 
| Cow position: | chr6:35420824-35420397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 37 | 
| Conread position: | 21-471 | 
| Cow position: | chr6:7179922-7179478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 97 | 
| Conread position: | 21-472 | 
| Cow position: | chr6:30275422-30274962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 199 | 
| Conread position: | 23-227 | 
| Cow position: | chr6:42359922-42359716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 5, 161 | 
| Conread position: | 23-469 | 
| Cow position: | chr6:37115896-37116349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 199 | 
| Conread position: | 24-435 | 
| Cow position: | chr6:48368152-48368555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 8, 101 | 
| Conread position: | 26-268 | 
| Cow position: | chr6:65900157-65899916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 14, 29 | 
| Conread position: | 26-462 | 
| Cow position: | chr6:15476043-15476494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 7e-40 | 
| Alignm gaps (pig, cow): | 61, 138 | 
| Conread position: | 29-472 | 
| Cow position: | chr6:8761536-8761088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 175 | 
| Conread position: | 41-469 | 
| Cow position: | chr6:66231582-66232008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 27 | 
| Conread position: | 45-471 | 
| Cow position: | chr6:34203295-34203720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 40 | 
| Conread position: | 57-400 | 
| Cow position: | chr6:526036-526376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 32, 140 | 
| Conread position: | 57-403 | 
| Cow position: | chr6:43793965-43793628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 51 | 
| Conread position: | 62-472 | 
| Cow position: | chr6:24238862-24239282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 158 | 
| Conread position: | 84-469 | 
| Cow position: | chr6:28106014-28105632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 7, 66 | 
| Conread position: | 89-326 | 
| Cow position: | chr6:52692862-52693118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 115, 82 | 
| Conread position: | 106-468 | 
| Cow position: | chr6:25214102-25214470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 17 | 
| Conread position: | 107-471 | 
| Cow position: | chr6:32330949-32330578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 116 | 
| Conread position: | 146-471 | 
| Cow position: | chr6:7866869-7866535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 76 | 
| Conread position: | 166-472 | 
| Cow position: | chr6:64715133-64715446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 13 | 
| Conread position: | 167-471 | 
| Cow position: | chr6:3148908-3149220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 51 | 
| Conread position: | 176-471 | 
| Cow position: | chr6:39908441-39908743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 46 | 
| Conread position: | 195-469 | 
| Cow position: | chr6:47043271-47042985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 151, 25 | 
| Conread position: | 223-469 | 
| Cow position: | chr6:6476522-6476276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 80 | 
| Conread position: | 240-471 | 
| Cow position: | chr6:40315032-40315260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 106, 52 | 
| Conread position: | 263-471 | 
| Cow position: | chr6:40251663-40251879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 77, 163 | 
| Conread position: | 308-471 | 
| Cow position: | chr6:10641204-10641375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 14, 88 | 
| Conread position: | 310-477 | 
| Cow position: | chr6:65007736-65007910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 30, 8 | 
Show alignments to all cow chromosomes.
