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Cow genome map

           
Conread name:
           
Pig1-35E01
        

               
Conread position:
               
29-551
               

               
Cow position:
               
chr1:12222352-12222875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
38-285
               

               
Cow position:
               
chr1:99604945-99605192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
44-551
               

               
Cow position:
               
chr1:21508643-21508121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 197
               

               
Conread position:
               
52-547
               

               
Cow position:
               
chr1:81613611-81613119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
54-496
               

               
Cow position:
               
chr1:7971639-7971212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
55-551
               

               
Cow position:
               
chr1:66138556-66138047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 170
               

               
Conread position:
               
57-403
               

               
Cow position:
               
chr1:72105630-72105286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 121
               

               
Conread position:
               
57-551
               

               
Cow position:
               
chr1:61741737-61742238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
60-533
               

               
Cow position:
               
chr1:5596982-5597454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
61-551
               

               
Cow position:
               
chr1:54206594-54207086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
62-307
               

               
Cow position:
               
chr1:83024946-83025189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
62-347
               

               
Cow position:
               
chr1:3966054-3965768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
62-546
               

               
Cow position:
               
chr1:78811263-78810770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
66-289
               

               
Cow position:
               
chr1:93590370-93590601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
66-308
               

               
Cow position:
               
chr1:89158484-89158724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
66-357
               

               
Cow position:
               
chr1:73457874-73458175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
66-423
               

               
Cow position:
               
chr1:91023246-91023615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 165
               

               
Conread position:
               
66-471
               

               
Cow position:
               
chr1:7748437-7748021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
31, 164
               

               
Conread position:
               
66-471
               

               
Cow position:
               
chr1:7752601-7752187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
31, 162
               

               
Conread position:
               
66-483
               

               
Cow position:
               
chr1:4414007-4414413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
66-541
               

               
Cow position:
               
chr1:74083966-74084449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
17, 170
               

               
Conread position:
               
66-551
               

               
Cow position:
               
chr1:42256287-42256780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
66-551
               

               
Cow position:
               
chr1:73960910-73960430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
67-351
               

               
Cow position:
               
chr1:35671754-35671466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
67-376
               

               
Cow position:
               
chr1:635462-635785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
9, 168
               

               
Conread position:
               
67-413
               

               
Cow position:
               
chr1:42541812-42541459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
67-486
               

               
Cow position:
               
chr1:21955151-21955582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
15, 119
               

               
Conread position:
               
67-496
               

               
Cow position:
               
chr1:6304656-6305087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
67-547
               

               
Cow position:
               
chr1:56225688-56225211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 105
               

               
Conread position:
               
67-551
               

               
Cow position:
               
chr1:23488282-23488783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
12, 177
               

               
Conread position:
               
67-551
               

               
Cow position:
               
chr1:99642156-99642640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
68-301
               

               
Cow position:
               
chr1:24530717-24530481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 104
               

               
Conread position:
               
68-343
               

               
Cow position:
               
chr1:46143248-46143530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
68-352
               

               
Cow position:
               
chr1:53452740-53452466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
68-354
               

               
Cow position:
               
chr1:52467505-52467223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
68-377
               

               
Cow position:
               
chr1:102305931-102306246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
68-457
               

               
Cow position:
               
chr1:90621285-90621692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
68-497
               

               
Cow position:
               
chr1:71295084-71295535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
68-517
               

               
Cow position:
               
chr1:51446101-51445639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 102
               

               
Conread position:
               
68-520
               

               
Cow position:
               
chr1:70538825-70538360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
68-541
               

               
Cow position:
               
chr1:61885131-61884655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 159
               

               
Conread position:
               
68-541
               

               
Cow position:
               
chr1:68817585-68818056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
68-551
               

               
Cow position:
               
chr1:61005338-61005835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 111
               

               
Conread position:
               
68-551
               

               
Cow position:
               
chr1:69539902-69539427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
68-551
               

               
Cow position:
               
chr1:81568810-81569306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
68-551
               

               
Cow position:
               
chr1:89509712-89510202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
69-250
               

               
Cow position:
               
chr1:77810545-77810731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 104
               

               
Conread position:
               
69-260
               

               
Cow position:
               
chr1:62469275-62469080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
69-268
               

               
Cow position:
               
chr1:55685761-55685967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
69-268
               

               
Cow position:
               
chr1:70483117-70483323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
69-288
               

               
Cow position:
               
chr1:68688797-68688575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
69-297
               

               
Cow position:
               
chr1:45315412-45315653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 169
               

               
Conread position:
               
69-333
               

               
Cow position:
               
chr1:97303035-97303302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 114
               

               
Conread position:
               
69-352
               

               
Cow position:
               
chr1:77232356-77232650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
69-360
               

               
Cow position:
               
chr1:90904539-90904838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 103
               

               
Conread position:
               
69-387
               

               
Cow position:
               
chr1:31794789-31795114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
13, 123
               

               
Conread position:
               
69-387
               

               
Cow position:
               
chr1:56618438-56618762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
69-436
               

               
Cow position:
               
chr1:78097140-78096776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
69-454
               

               
Cow position:
               
chr1:20667532-20667916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
69-473
               

               
Cow position:
               
chr1:70344264-70343844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 164
               

               
Conread position:
               
69-506
               

               
Cow position:
               
chr1:55230191-55229756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
69-534
               

               
Cow position:
               
chr1:100449973-100450443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
69-542
               

               
Cow position:
               
chr1:43505741-43505262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
69-545
               

               
Cow position:
               
chr1:72304181-72304635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr1:31934720-31934243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr1:40600243-40599782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr1:41182054-41181571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr1:79844697-79844199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 177
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr1:82936387-82936852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr1:97755720-97755256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
70-268
               

               
Cow position:
               
chr1:525024-524819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
70-268
               

               
Cow position:
               
chr1:11708810-11709007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr1:54267719-54267999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
10, 145
               

               
Conread position:
               
70-379
               

               
Cow position:
               
chr1:81477644-81477973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
8, 166
               

               
Conread position:
               
70-388
               

               
Cow position:
               
chr1:42482417-42482091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
70-427
               

               
Cow position:
               
chr1:101835030-101834673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
70-483
               

               
Cow position:
               
chr1:42175945-42175517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
70-485
               

               
Cow position:
               
chr1:12464452-12464871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
70-486
               

               
Cow position:
               
chr1:196791-197216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
70-512
               

               
Cow position:
               
chr1:69678108-69678561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
70-516
               

               
Cow position:
               
chr1:10633252-10632814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
70-520
               

               
Cow position:
               
chr1:78857109-78857565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 165
               

               
Conread position:
               
70-551
               

               
Cow position:
               
chr1:22729269-22728778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
70-551
               

               
Cow position:
               
chr1:72068614-72069097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 165
               

               
Conread position:
               
70-552
               

               
Cow position:
               
chr1:42887065-42887532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
71-264
               

               
Cow position:
               
chr1:69378381-69378584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
71-266
               

               
Cow position:
               
chr1:42775122-42774924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
71-325
               

               
Cow position:
               
chr1:102529638-102529906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
71-404
               

               
Cow position:
               
chr1:79640072-79640418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
13, 116
               

               
Conread position:
               
71-435
               

               
Cow position:
               
chr1:88913536-88913158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 162
               

               
Conread position:
               
71-441
               

               
Cow position:
               
chr1:86110529-86110897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 163
               

               
Conread position:
               
71-462
               

               
Cow position:
               
chr1:61012524-61012127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
71-495
               

               
Cow position:
               
chr1:8287414-8287831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
26, 161
               

               
Conread position:
               
71-506
               

               
Cow position:
               
chr1:64803880-64804336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 162
               

               
Conread position:
               
71-550
               

               
Cow position:
               
chr1:1980893-1981381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 165
               

               
Conread position:
               
71-551
               

               
Cow position:
               
chr1:22827356-22826896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
72, 24
               

               
Conread position:
               
71-551
               

               
Cow position:
               
chr1:43352439-43352919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
71-551
               

               
Cow position:
               
chr1:53374643-53374165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
72-220
               

               
Cow position:
               
chr1:39095700-39095545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
72-310
               

               
Cow position:
               
chr1:67654110-67654349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
72-332
               

               
Cow position:
               
chr1:3942003-3942267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 100
               

               
Conread position:
               
72-551
               

               
Cow position:
               
chr1:54199180-54199650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
73-396
               

               
Cow position:
               
chr1:261279-261599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
73-551
               

               
Cow position:
               
chr1:25383883-25383389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 162
               

               
Conread position:
               
74-429
               

               
Cow position:
               
chr1:86682355-86682716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 19
               

               
Conread position:
               
74-537
               

               
Cow position:
               
chr1:68826710-68827161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
75-296
               

               
Cow position:
               
chr1:55753008-55753231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
75-375
               

               
Cow position:
               
chr1:79135491-79135179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
75-376
               

               
Cow position:
               
chr1:78066330-78066642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
75-471
               

               
Cow position:
               
chr1:83072653-83072250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
75-541
               

               
Cow position:
               
chr1:57263781-57264246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
75-542
               

               
Cow position:
               
chr1:37321797-37322267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 83
               

               
Conread position:
               
75-542
               

               
Cow position:
               
chr1:64302037-64302493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
14, 90
               

               
Conread position:
               
75-551
               

               
Cow position:
               
chr1:41056891-41056414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 158
               

               
Conread position:
               
75-551
               

               
Cow position:
               
chr1:61564993-61564521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
75-551
               

               
Cow position:
               
chr1:93499831-93499352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 93
               

               
Conread position:
               
77-382
               

               
Cow position:
               
chr1:82513142-82513462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
77-387
               

               
Cow position:
               
chr1:41137938-41138243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
77-429
               

               
Cow position:
               
chr1:62519576-62519204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 138
               

               
Conread position:
               
77-440
               

               
Cow position:
               
chr1:24777774-24778148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
77-551
               

               
Cow position:
               
chr1:85029146-85028691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
78-393
               

               
Cow position:
               
chr1:65028726-65028412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
78-549
               

               
Cow position:
               
chr1:16855491-16855956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
7, 98
               

               
Conread position:
               
78-551
               

               
Cow position:
               
chr1:33330893-33331343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 58
               

               
Conread position:
               
80-261
               

               
Cow position:
               
chr1:32035507-32035692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
80-261
               

               
Cow position:
               
chr1:100812094-100812273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
91, 76
               

               
Conread position:
               
80-271
               

               
Cow position:
               
chr1:50585669-50585870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
18, 95
               

               
Conread position:
               
80-337
               

               
Cow position:
               
chr1:48618040-48618301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
80-361
               

               
Cow position:
               
chr1:628175-627876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
20, 156
               

               
Conread position:
               
80-366
               

               
Cow position:
               
chr1:46031168-46030869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 146
               

               
Conread position:
               
80-376
               

               
Cow position:
               
chr1:78794029-78794325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
80-454
               

               
Cow position:
               
chr1:68763477-68763856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
17, 165
               

               
Conread position:
               
80-493
               

               
Cow position:
               
chr1:74955825-74956239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 79
               

               
Conread position:
               
80-494
               

               
Cow position:
               
chr1:34771292-34771720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
18, 156
               

               
Conread position:
               
80-506
               

               
Cow position:
               
chr1:10655684-10655249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 119
               

               
Conread position:
               
80-506
               

               
Cow position:
               
chr1:70435191-70434765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
80-509
               

               
Cow position:
               
chr1:27145437-27145885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 157
               

               
Conread position:
               
80-520
               

               
Cow position:
               
chr1:14379343-14379773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
80-520
               

               
Cow position:
               
chr1:29935184-29935624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 102
               

               
Conread position:
               
80-520
               

               
Cow position:
               
chr1:39426810-39427224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
80-520
               

               
Cow position:
               
chr1:56477792-56477352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
80-520
               

               
Cow position:
               
chr1:75745067-75744617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
80-539
               

               
Cow position:
               
chr1:73584198-73584660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
17, 157
               

               
Conread position:
               
80-539
               

               
Cow position:
               
chr1:79164875-79165350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 106
               

               
Conread position:
               
80-540
               

               
Cow position:
               
chr1:76470864-76470400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
17, 188
               

               
Conread position:
               
80-542
               

               
Cow position:
               
chr1:21787531-21787065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
80-542
               

               
Cow position:
               
chr1:54478523-54478061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr1:18936630-18937103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 152
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr1:48105218-48105706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 134
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr1:52496975-52496506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr1:78092247-78091762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 155
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr1:79591311-79590830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 147
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr1:83083202-83082735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
81-425
               

               
Cow position:
               
chr1:22526080-22525730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
81-428
               

               
Cow position:
               
chr1:64572720-64572361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
81-506
               

               
Cow position:
               
chr1:4691794-4691364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
16, 92
               

               
Conread position:
               
81-506
               

               
Cow position:
               
chr1:55705041-55705482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
81-538
               

               
Cow position:
               
chr1:100552172-100551713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
81-550
               

               
Cow position:
               
chr1:95101157-95100694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
81-551
               

               
Cow position:
               
chr1:20000550-20001022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
81-551
               

               
Cow position:
               
chr1:24132857-24133325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
81-551
               

               
Cow position:
               
chr1:81290710-81290248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
81-551
               

               
Cow position:
               
chr1:85362050-85361585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
82-315
               

               
Cow position:
               
chr1:98912213-98911974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
15, 151
               

               
Conread position:
               
82-343
               

               
Cow position:
               
chr1:43286534-43286274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
82-395
               

               
Cow position:
               
chr1:20104471-20104149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 146
               

               
Conread position:
               
82-471
               

               
Cow position:
               
chr1:89388548-89388140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
82-543
               

               
Cow position:
               
chr1:101714321-101713854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
82-551
               

               
Cow position:
               
chr1:89341779-89342259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
83-330
               

               
Cow position:
               
chr1:81481182-81481439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
83-338
               

               
Cow position:
               
chr1:48206336-48206598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
83-522
               

               
Cow position:
               
chr1:88926179-88926624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
56, 144
               

               
Conread position:
               
83-552
               

               
Cow position:
               
chr1:32341010-32341478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
7, 79
               

               
Conread position:
               
84-515
               

               
Cow position:
               
chr1:51770295-51769847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
15, 148
               

               
Conread position:
               
84-551
               

               
Cow position:
               
chr1:100422023-100421573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 116
               

               
Conread position:
               
85-547
               

               
Cow position:
               
chr1:70829098-70828647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
86-294
               

               
Cow position:
               
chr1:759211-759432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
12, 93
               

               
Conread position:
               
86-426
               

               
Cow position:
               
chr1:31272254-31272591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
113, 10
               

               
Conread position:
               
86-512
               

               
Cow position:
               
chr1:57575563-57576002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 193
               

               
Conread position:
               
86-520
               

               
Cow position:
               
chr1:53521106-53520663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
87-310
               

               
Cow position:
               
chr1:33775440-33775673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
87-311
               

               
Cow position:
               
chr1:79146614-79146847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 148
               

               
Conread position:
               
87-517
               

               
Cow position:
               
chr1:71078764-71079193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
95-426
               

               
Cow position:
               
chr1:89449089-89448750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
95-496
               

               
Cow position:
               
chr1:98031106-98030696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
96-340
               

               
Cow position:
               
chr1:79004166-79003909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
16, 138
               

               
Conread position:
               
96-373
               

               
Cow position:
               
chr1:17196435-17196727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 137
               

               
Conread position:
               
96-448
               

               
Cow position:
               
chr1:55428763-55429128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
16, 138
               

               
Conread position:
               
96-487
               

               
Cow position:
               
chr1:679418-679821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
96-520
               

               
Cow position:
               
chr1:100762264-100761848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
96-541
               

               
Cow position:
               
chr1:6941656-6941206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 133
               

               
Conread position:
               
96-541
               

               
Cow position:
               
chr1:34856435-34856889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
16, 138
               

               
Conread position:
               
96-551
               

               
Cow position:
               
chr1:77720070-77720497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
99-431
               

               
Cow position:
               
chr1:33409436-33409783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 134
               

               
Conread position:
               
99-470
               

               
Cow position:
               
chr1:58754611-58754977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
99-537
               

               
Cow position:
               
chr1:45555552-45555106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
99-541
               

               
Cow position:
               
chr1:6959066-6958619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 130
               

               
Conread position:
               
99-551
               

               
Cow position:
               
chr1:68217179-68217630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 132
               

               
Conread position:
               
100-420
               

               
Cow position:
               
chr1:8128793-8129111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
102-359
               

               
Cow position:
               
chr1:37124308-37124042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 88
               

               
Conread position:
               
104-446
               

               
Cow position:
               
chr1:13810830-13810482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 128
               

               
Conread position:
               
106-497
               

               
Cow position:
               
chr1:49433084-49433484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
108-346
               

               
Cow position:
               
chr1:89157955-89158200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
108-429
               

               
Cow position:
               
chr1:87197995-87197674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
108-466
               

               
Cow position:
               
chr1:42398021-42398385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
77, 96
               

               
Conread position:
               
108-519
               

               
Cow position:
               
chr1:68855341-68854933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
108-542
               

               
Cow position:
               
chr1:82337606-82338046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 158
               

               
Conread position:
               
108-549
               

               
Cow position:
               
chr1:95499321-95499763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
108-551
               

               
Cow position:
               
chr1:13637490-13637937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
108-551
               

               
Cow position:
               
chr1:53398148-53397714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 59
               

               
Conread position:
               
108-551
               

               
Cow position:
               
chr1:62964443-62964009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 124
               

               
Conread position:
               
108-551
               

               
Cow position:
               
chr1:97954308-97954718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
190, 54
               

               
Conread position:
               
110-551
               

               
Cow position:
               
chr1:53458871-53458435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 123
               

               
Conread position:
               
114-533
               

               
Cow position:
               
chr1:19516227-19516663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
114-551
               

               
Cow position:
               
chr1:76019528-76019950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 115
               

               
Conread position:
               
122-376
               

               
Cow position:
               
chr1:37886649-37886910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
124-519
               

               
Cow position:
               
chr1:95057203-95056813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
124-551
               

               
Cow position:
               
chr1:52039792-52039367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 47
               

               
Conread position:
               
125-392
               

               
Cow position:
               
chr1:7023277-7023004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
6, 47
               

               
Conread position:
               
128-551
               

               
Cow position:
               
chr1:60032444-60032868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
130-520
               

               
Cow position:
               
chr1:47233329-47233718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
132-357
               

               
Cow position:
               
chr1:80841794-80841571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
134-409
               

               
Cow position:
               
chr1:85549932-85550211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
137-341
               

               
Cow position:
               
chr1:95072475-95072264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
137-429
               

               
Cow position:
               
chr1:41115577-41115868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
137-435
               

               
Cow position:
               
chr1:90975944-90976246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
137-438
               

               
Cow position:
               
chr1:3882316-3882627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
137-520
               

               
Cow position:
               
chr1:6078036-6077651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
137-542
               

               
Cow position:
               
chr1:39509913-39510303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 90
               

               
Conread position:
               
137-551
               

               
Cow position:
               
chr1:94226412-94226818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
137-552
               

               
Cow position:
               
chr1:68253742-68253320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
138-337
               

               
Cow position:
               
chr1:80584571-80584369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
138-341
               

               
Cow position:
               
chr1:86912584-86912373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 85
               

               
Conread position:
               
138-480
               

               
Cow position:
               
chr1:63138983-63138636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
138-542
               

               
Cow position:
               
chr1:63595912-63596321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
138-551
               

               
Cow position:
               
chr1:70297420-70296998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
139-366
               

               
Cow position:
               
chr1:50992075-50991844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 28
               

               
Conread position:
               
139-436
               

               
Cow position:
               
chr1:80311579-80311310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
139-438
               

               
Cow position:
               
chr1:45553102-45553393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
139-496
               

               
Cow position:
               
chr1:53671609-53671968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 32
               

               
Conread position:
               
139-520
               

               
Cow position:
               
chr1:3789929-3790299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
139-520
               

               
Cow position:
               
chr1:71253415-71253798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
139-520
               

               
Cow position:
               
chr1:85162404-85162790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 90
               

               
Conread position:
               
139-545
               

               
Cow position:
               
chr1:82884250-82884649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
139-549
               

               
Cow position:
               
chr1:57900583-57901014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
139-550
               

               
Cow position:
               
chr1:98551860-98551448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
139-551
               

               
Cow position:
               
chr1:33996781-33997182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
139-551
               

               
Cow position:
               
chr1:100800493-100800087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr1:51044169-51044407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
158, 28
               

               
Conread position:
               
140-516
               

               
Cow position:
               
chr1:74822586-74822212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 64
               

               
Conread position:
               
140-517
               

               
Cow position:
               
chr1:4032772-4032394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
140-551
               

               
Cow position:
               
chr1:31347797-31348183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 45
               

               
Conread position:
               
141-517
               

               
Cow position:
               
chr1:52995165-52994784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
141-551
               

               
Cow position:
               
chr1:89741856-89742282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
31, 136
               

               
Conread position:
               
142-412
               

               
Cow position:
               
chr1:41047164-41047436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
142-496
               

               
Cow position:
               
chr1:52956391-52956041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
143-497
               

               
Cow position:
               
chr1:3166935-3167292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 84
               

               
Conread position:
               
144-376
               

               
Cow position:
               
chr1:68845030-68845257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
144-496
               

               
Cow position:
               
chr1:93044153-93043807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
144-517
               

               
Cow position:
               
chr1:36932293-36931919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
144-517
               

               
Cow position:
               
chr1:92369870-92369476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
145-337
               

               
Cow position:
               
chr1:36578652-36578467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
145-545
               

               
Cow position:
               
chr1:84255902-84255489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
145-551
               

               
Cow position:
               
chr1:80988481-80988076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
146-492
               

               
Cow position:
               
chr1:19885517-19885170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
146-518
               

               
Cow position:
               
chr1:3138047-3137692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
147-454
               

               
Cow position:
               
chr1:91874784-91875085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
147-551
               

               
Cow position:
               
chr1:57119214-57119614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
148-357
               

               
Cow position:
               
chr1:67688451-67688661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
148-551
               

               
Cow position:
               
chr1:44768981-44769379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
126, 37
               

               
Conread position:
               
151-412
               

               
Cow position:
               
chr1:18780200-18780470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
151-520
               

               
Cow position:
               
chr1:5135580-5135934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
152-437
               

               
Cow position:
               
chr1:38401929-38401631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
153-438
               

               
Cow position:
               
chr1:85647653-85647944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
155-551
               

               
Cow position:
               
chr1:51968586-51968200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
143, 112
               

               
Conread position:
               
156-542
               

               
Cow position:
               
chr1:67821097-67821471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
157-456
               

               
Cow position:
               
chr1:75933391-75933096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
158-486
               

               
Cow position:
               
chr1:100393035-100393373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
161-516
               

               
Cow position:
               
chr1:100706247-100705894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
162-502
               

               
Cow position:
               
chr1:96472550-96472205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
162-503
               

               
Cow position:
               
chr1:69415591-69415943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
162-507
               

               
Cow position:
               
chr1:44125518-44125870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
162-547
               

               
Cow position:
               
chr1:31413859-31414227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
163-551
               

               
Cow position:
               
chr1:89350084-89349707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
163-553
               

               
Cow position:
               
chr1:19466170-19465784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
164-458
               

               
Cow position:
               
chr1:60281491-60281188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
164-473
               

               
Cow position:
               
chr1:89498062-89497770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
166-542
               

               
Cow position:
               
chr1:80900235-80899847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
168-450
               

               
Cow position:
               
chr1:12978796-12978506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
168-541
               

               
Cow position:
               
chr1:95764980-95765349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
174-376
               

               
Cow position:
               
chr1:19226949-19227155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
175-551
               

               
Cow position:
               
chr1:3720337-3720695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
177-551
               

               
Cow position:
               
chr1:7350652-7350268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 7
               

               
Conread position:
               
179-500
               

               
Cow position:
               
chr1:62291598-62291908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
179-520
               

               
Cow position:
               
chr1:81563848-81563490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
182-551
               

               
Cow position:
               
chr1:1991324-1991700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
184-456
               

               
Cow position:
               
chr1:73196133-73196412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
6, 88
               

               
Conread position:
               
184-551
               

               
Cow position:
               
chr1:20205125-20204755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
185-539
               

               
Cow position:
               
chr1:42555358-42555012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
105, 37
               

               
Conread position:
               
187-506
               

               
Cow position:
               
chr1:56635188-56634870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
98, 35
               

               
Conread position:
               
187-551
               

               
Cow position:
               
chr1:10719390-10719760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
188-551
               

               
Cow position:
               
chr1:102647185-102647539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
110, 6
               

               
Conread position:
               
191-454
               

               
Cow position:
               
chr1:70026259-70026521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
191-551
               

               
Cow position:
               
chr1:52753074-52753436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
191-551
               

               
Cow position:
               
chr1:61176264-61175913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
194-452
               

               
Cow position:
               
chr1:6788200-6788462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
103, 28
               

               
Conread position:
               
195-520
               

               
Cow position:
               
chr1:53423767-53423435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
196-550
               

               
Cow position:
               
chr1:20384542-20384894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
196-551
               

               
Cow position:
               
chr1:97761681-97761358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
260, 26
               

               
Conread position:
               
198-505
               

               
Cow position:
               
chr1:7186868-7186560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
5, 25
               

               
Conread position:
               
198-547
               

               
Cow position:
               
chr1:85774537-85774189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
71, 5
               

               
Conread position:
               
198-551
               

               
Cow position:
               
chr1:83982300-83982646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
5, 25
               

               
Conread position:
               
200-435
               

               
Cow position:
               
chr1:101946637-101946866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
201-356
               

               
Cow position:
               
chr1:61560647-61560807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
201-419
               

               
Cow position:
               
chr1:87440543-87440325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
201-520
               

               
Cow position:
               
chr1:55135912-55135593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
201-539
               

               
Cow position:
               
chr1:55146874-55146539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 17
               

               
Conread position:
               
202-444
               

               
Cow position:
               
chr1:9470323-9470566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
203-412
               

               
Cow position:
               
chr1:91369935-91370144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
206-506
               

               
Cow position:
               
chr1:43357940-43358243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
207-544
               

               
Cow position:
               
chr1:90864223-90864563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
211-541
               

               
Cow position:
               
chr1:51628445-51628762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
176, 42
               

               
Conread position:
               
214-481
               

               
Cow position:
               
chr1:72103915-72103643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
214-547
               

               
Cow position:
               
chr1:96478765-96478427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
86, 223
               

               
Conread position:
               
214-551
               

               
Cow position:
               
chr1:63390702-63391042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
75, 57
               

               
Conread position:
               
214-551
               

               
Cow position:
               
chr1:88652701-88652361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
218-440
               

               
Cow position:
               
chr1:89508611-89508392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
6, 53
               

               
Conread position:
               
219-413
               

               
Cow position:
               
chr1:85301477-85301281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 119
               

               
Conread position:
               
219-551
               

               
Cow position:
               
chr1:24235459-24235788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
219-551
               

               
Cow position:
               
chr1:60907437-60907091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
231-542
               

               
Cow position:
               
chr1:45535755-45535441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
59, 39
               

               
Conread position:
               
233-462
               

               
Cow position:
               
chr1:70028626-70028396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
240-440
               

               
Cow position:
               
chr1:99039316-99039517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
240-516
               

               
Cow position:
               
chr1:26929936-26930213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
240-541
               

               
Cow position:
               
chr1:57635501-57635207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
241-506
               

               
Cow position:
               
chr1:62920206-62919948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
249-541
               

               
Cow position:
               
chr1:32244371-32244659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
250-520
               

               
Cow position:
               
chr1:11770263-11770536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
253-506
               

               
Cow position:
               
chr1:29671495-29671752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
253-540
               

               
Cow position:
               
chr1:3034973-3035255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
253-551
               

               
Cow position:
               
chr1:1403455-1403740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
256-542
               

               
Cow position:
               
chr1:71818439-71818726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
46, 7
               

               
Conread position:
               
260-551
               

               
Cow position:
               
chr1:71946351-71946640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
262-549
               

               
Cow position:
               
chr1:12595884-12596175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
264-518
               

               
Cow position:
               
chr1:94404229-94403975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
34, 6
               

               
Conread position:
               
270-520
               

               
Cow position:
               
chr1:3661054-3661299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 71
               

               
Conread position:
               
273-551
               

               
Cow position:
               
chr1:3456870-3456602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
230, 12
               

               
Conread position:
               
274-551
               

               
Cow position:
               
chr1:666372-666090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
35, 154
               

               
Conread position:
               
275-542
               

               
Cow position:
               
chr1:3340943-3340675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 86
               

               
Conread position:
               
275-551
               

               
Cow position:
               
chr1:41004355-41004637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 223
               

               
Conread position:
               
278-543
               

               
Cow position:
               
chr1:50679285-50679547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
109, 147
               

               
Conread position:
               
279-551
               

               
Cow position:
               
chr1:32630970-32630701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
109, 150
               

               
Conread position:
               
281-540
               

               
Cow position:
               
chr1:63905475-63905737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
285-541
               

               
Cow position:
               
chr1:56748586-56748330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
28, 238
               

               
Conread position:
               
286-551
               

               
Cow position:
               
chr1:61494867-61494607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
288-551
               

               
Cow position:
               
chr1:33811914-33811664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
289-464
               

               
Cow position:
               
chr1:40089943-40089765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
289-520
               

               
Cow position:
               
chr1:75967418-75967193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
213, 156
               

               
Conread position:
               
289-551
               

               
Cow position:
               
chr1:57524830-57525086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 122
               

               
Conread position:
               
291-542
               

               
Cow position:
               
chr1:84116381-84116141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
104, 44
               

               
Conread position:
               
291-550
               

               
Cow position:
               
chr1:5872986-5873242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
87, 134
               

               
Conread position:
               
296-538
               

               
Cow position:
               
chr1:50634421-50634663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
95, 68
               

               
Conread position:
               
298-538
               

               
Cow position:
               
chr1:6322181-6321952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
162, 13
               

               
Conread position:
               
299-512
               

               
Cow position:
               
chr1:25886101-25886310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
161, 65
               

               
Conread position:
               
300-462
               

               
Cow position:
               
chr1:102113129-102113291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
300-551
               

               
Cow position:
               
chr1:69940991-69941238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
78, 116
               

               
Conread position:
               
300-551
               

               
Cow position:
               
chr1:83943371-83943620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
301-520
               

               
Cow position:
               
chr1:37646028-37646244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
42, 146
               

               
Conread position:
               
302-551
               

               
Cow position:
               
chr1:15311843-15311598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 60
               

               
Conread position:
               
303-441
               

               
Cow position:
               
chr1:31960198-31960059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
304-550
               

               
Cow position:
               
chr1:99095334-99095096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
305-477
               

               
Cow position:
               
chr1:81471103-81470929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
305-505
               

               
Cow position:
               
chr1:53540360-53540163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
145, 30
               

               
Conread position:
               
305-549
               

               
Cow position:
               
chr1:44165053-44164812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
151, 219
               

               
Conread position:
               
307-517
               

               
Cow position:
               
chr1:101547064-101547282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 196
               

               
Conread position:
               
311-532
               

               
Cow position:
               
chr1:89395566-89395340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 204
               

               
Conread position:
               
311-539
               

               
Cow position:
               
chr1:20799850-20799610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
314-551
               

               
Cow position:
               
chr1:82861743-82861503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
77, 199
               

               
Conread position:
               
319-517
               

               
Cow position:
               
chr1:30504428-30504231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
141, 88
               

               
Conread position:
               
327-496
               

               
Cow position:
               
chr1:14981172-14981337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
331-520
               

               
Cow position:
               
chr1:99118334-99118142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
331-551
               

               
Cow position:
               
chr1:98494367-98494157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
335-551
               

               
Cow position:
               
chr1:55686276-55686489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
125, 151
               

               
Conread position:
               
345-551
               

               
Cow position:
               
chr1:3076464-3076659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 81
               

               
Conread position:
               
348-551
               

               
Cow position:
               
chr1:40062380-40062178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
112, 173
               

               
Conread position:
               
365-520
               

               
Cow position:
               
chr1:52415043-52415202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               
Show alignments to all cow chromosomes.