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Cow genome map

           
Conread name:
           
Pig1-35E01
        

               
Conread position:
               
39-454
               

               
Cow position:
               
chr14:20826290-20826696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
53-547
               

               
Cow position:
               
chr14:20016900-20016391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
62-376
               

               
Cow position:
               
chr14:35503189-35503513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
62-520
               

               
Cow position:
               
chr14:3194698-3195144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
62-551
               

               
Cow position:
               
chr14:18345902-18345411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
64-442
               

               
Cow position:
               
chr14:15997929-15997552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
19, 106
               

               
Conread position:
               
65-306
               

               
Cow position:
               
chr14:10706706-10706948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
66-404
               

               
Cow position:
               
chr14:23442848-23443195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
66-492
               

               
Cow position:
               
chr14:13845823-13846250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
66-551
               

               
Cow position:
               
chr14:40230811-40230317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
67-471
               

               
Cow position:
               
chr14:47252406-47251979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 170
               

               
Conread position:
               
67-520
               

               
Cow position:
               
chr14:39770392-39769938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
67-551
               

               
Cow position:
               
chr14:38920786-38921257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
68-296
               

               
Cow position:
               
chr14:11576898-11577132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
68-330
               

               
Cow position:
               
chr14:11643417-11643153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 104
               

               
Conread position:
               
68-357
               

               
Cow position:
               
chr14:16524301-16524606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
68-438
               

               
Cow position:
               
chr14:16256603-16256977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
68-513
               

               
Cow position:
               
chr14:47673043-47672597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
68-516
               

               
Cow position:
               
chr14:20010485-20010022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
29, 167
               

               
Conread position:
               
68-551
               

               
Cow position:
               
chr14:26620450-26620938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
68-551
               

               
Cow position:
               
chr14:28304958-28304468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 293
               

               
Conread position:
               
69-397
               

               
Cow position:
               
chr14:48772747-48773074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
69-404
               

               
Cow position:
               
chr14:23424095-23424434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 75
               

               
Conread position:
               
69-450
               

               
Cow position:
               
chr14:2959353-2959733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
69-453
               

               
Cow position:
               
chr14:7479835-7480239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
18, 168
               

               
Conread position:
               
69-462
               

               
Cow position:
               
chr14:20110890-20110488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 161
               

               
Conread position:
               
69-496
               

               
Cow position:
               
chr14:11043668-11043222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 170
               

               
Conread position:
               
69-506
               

               
Cow position:
               
chr14:10609511-10609968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
69-520
               

               
Cow position:
               
chr14:21357387-21357845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 159
               

               
Conread position:
               
69-521
               

               
Cow position:
               
chr14:24921924-24922400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
20, 171
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr14:12546725-12546269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
31, 134
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr14:20640799-20640301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 163
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr14:41472145-41471650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 188
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr14:42155137-42154641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 79
               

               
Conread position:
               
70-246
               

               
Cow position:
               
chr14:32784285-32784100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
70-264
               

               
Cow position:
               
chr14:41156890-41156691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 105
               

               
Conread position:
               
70-311
               

               
Cow position:
               
chr14:12033414-12033162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 169
               

               
Conread position:
               
70-313
               

               
Cow position:
               
chr14:40191430-40191666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
70-460
               

               
Cow position:
               
chr14:25986343-25986749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 163
               

               
Conread position:
               
70-509
               

               
Cow position:
               
chr14:6541898-6541440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
13, 163
               

               
Conread position:
               
70-510
               

               
Cow position:
               
chr14:48447334-48446877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 164
               

               
Conread position:
               
70-539
               

               
Cow position:
               
chr14:23682098-23682571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
70-539
               

               
Cow position:
               
chr14:45677061-45677531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
71-317
               

               
Cow position:
               
chr14:4848182-4848432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
71-466
               

               
Cow position:
               
chr14:13042591-13042999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
71-551
               

               
Cow position:
               
chr14:12244552-12244066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 112
               

               
Conread position:
               
71-551
               

               
Cow position:
               
chr14:20667174-20666705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
72-551
               

               
Cow position:
               
chr14:41749923-41749444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 94
               

               
Conread position:
               
73-426
               

               
Cow position:
               
chr14:36254855-36254508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
24, 85
               

               
Conread position:
               
73-551
               

               
Cow position:
               
chr14:26442513-26442018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 166
               

               
Conread position:
               
74-311
               

               
Cow position:
               
chr14:16457344-16457596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
54, 168
               

               
Conread position:
               
75-296
               

               
Cow position:
               
chr14:18301792-18302025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
75-543
               

               
Cow position:
               
chr14:10078090-10078569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 171
               

               
Conread position:
               
77-310
               

               
Cow position:
               
chr14:43868144-43868387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 149
               

               
Conread position:
               
77-551
               

               
Cow position:
               
chr14:9019879-9020346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
79-422
               

               
Cow position:
               
chr14:15492431-15492791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 202
               

               
Conread position:
               
80-303
               

               
Cow position:
               
chr14:27733449-27733673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
80-310
               

               
Cow position:
               
chr14:45577241-45577015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
80-336
               

               
Cow position:
               
chr14:21224484-21224749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
80-372
               

               
Cow position:
               
chr14:28153904-28153601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 153
               

               
Conread position:
               
80-413
               

               
Cow position:
               
chr14:21933502-21933155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
80-418
               

               
Cow position:
               
chr14:48838432-48838786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
17, 156
               

               
Conread position:
               
80-487
               

               
Cow position:
               
chr14:28115350-28114924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 147
               

               
Conread position:
               
80-520
               

               
Cow position:
               
chr14:13809795-13810230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
80-547
               

               
Cow position:
               
chr14:33791034-33791507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
80-549
               

               
Cow position:
               
chr14:21201979-21201512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr14:17013361-17013828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
20, 121
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr14:21284494-21284949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr14:22988876-22989354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 142
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr14:42330187-42330674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 206
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr14:48492958-48492465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 204
               

               
Conread position:
               
80-552
               

               
Cow position:
               
chr14:43046017-43046465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
81-357
               

               
Cow position:
               
chr14:12635035-12634757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
81-551
               

               
Cow position:
               
chr14:36166782-36167255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
82-288
               

               
Cow position:
               
chr14:11729264-11729054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
82-549
               

               
Cow position:
               
chr14:49824770-49824320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
82-551
               

               
Cow position:
               
chr14:19188898-19189357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
82-551
               

               
Cow position:
               
chr14:24236665-24237138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
15, 146
               

               
Conread position:
               
83-376
               

               
Cow position:
               
chr14:2038942-2038666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
83-376
               

               
Cow position:
               
chr14:40754400-40754095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 148
               

               
Conread position:
               
83-551
               

               
Cow position:
               
chr14:42596238-42596697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
86-374
               

               
Cow position:
               
chr14:24945647-24945344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 144
               

               
Conread position:
               
86-418
               

               
Cow position:
               
chr14:16550147-16549813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
87-542
               

               
Cow position:
               
chr14:41210713-41211168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 5
               

               
Conread position:
               
89-516
               

               
Cow position:
               
chr14:8101648-8102067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
91-413
               

               
Cow position:
               
chr14:23080900-23080579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
91-539
               

               
Cow position:
               
chr14:33714820-33714380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
91-551
               

               
Cow position:
               
chr14:8848132-8848568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 5
               

               
Conread position:
               
92-551
               

               
Cow position:
               
chr14:48426925-48427396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 142
               

               
Conread position:
               
95-542
               

               
Cow position:
               
chr14:23712552-23712997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
96-541
               

               
Cow position:
               
chr14:5630026-5630473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
96-551
               

               
Cow position:
               
chr14:27848037-27848520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
100-486
               

               
Cow position:
               
chr14:24387313-24387709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
97, 38
               

               
Conread position:
               
100-549
               

               
Cow position:
               
chr14:26433387-26432923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
107-541
               

               
Cow position:
               
chr14:41127778-41128200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
108-397
               

               
Cow position:
               
chr14:25903405-25903696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
108-449
               

               
Cow position:
               
chr14:8946210-8945862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 119
               

               
Conread position:
               
108-486
               

               
Cow position:
               
chr14:1646311-1645931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 6
               

               
Conread position:
               
108-532
               

               
Cow position:
               
chr14:32452124-32452562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
109-470
               

               
Cow position:
               
chr14:16760273-16760641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 111
               

               
Conread position:
               
111-543
               

               
Cow position:
               
chr14:27305025-27305472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
28, 86
               

               
Conread position:
               
115-551
               

               
Cow position:
               
chr14:41479783-41479339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
50, 114
               

               
Conread position:
               
123-497
               

               
Cow position:
               
chr14:38338246-38337874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
136-333
               

               
Cow position:
               
chr14:2344976-2345175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
154, 47
               

               
Conread position:
               
137-376
               

               
Cow position:
               
chr14:32553401-32553161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
38, 88
               

               
Conread position:
               
137-424
               

               
Cow position:
               
chr14:24607879-24608163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
161, 25
               

               
Conread position:
               
137-473
               

               
Cow position:
               
chr14:8749984-8750319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
137-520
               

               
Cow position:
               
chr14:4990907-4991284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
137-520
               

               
Cow position:
               
chr14:18657703-18657307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
137-520
               

               
Cow position:
               
chr14:37131567-37131951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
137-551
               

               
Cow position:
               
chr14:9029742-9029363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
138-443
               

               
Cow position:
               
chr14:33830206-33830513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 89
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr14:34096660-34096439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
139-409
               

               
Cow position:
               
chr14:10631215-10630943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
139-551
               

               
Cow position:
               
chr14:25779008-25779414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
140-376
               

               
Cow position:
               
chr14:22941822-22941573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 87
               

               
Conread position:
               
140-478
               

               
Cow position:
               
chr14:16032920-16033257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
140-551
               

               
Cow position:
               
chr14:15055083-15054668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
141-551
               

               
Cow position:
               
chr14:45605005-45605409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 73
               

               
Conread position:
               
142-506
               

               
Cow position:
               
chr14:19129416-19129789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 35
               

               
Conread position:
               
143-376
               

               
Cow position:
               
chr14:19951477-19951718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
144-543
               

               
Cow position:
               
chr14:44848458-44848073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
145-454
               

               
Cow position:
               
chr14:26490833-26490520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
145-551
               

               
Cow position:
               
chr14:20600298-20600701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
146-498
               

               
Cow position:
               
chr14:19372253-19372613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 16
               

               
Conread position:
               
149-415
               

               
Cow position:
               
chr14:46654624-46654358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
150-326
               

               
Cow position:
               
chr14:19487213-19487387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 5
               

               
Conread position:
               
150-491
               

               
Cow position:
               
chr14:40432843-40433184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
152-550
               

               
Cow position:
               
chr14:32371820-32371428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
162-506
               

               
Cow position:
               
chr14:17841363-17841009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
164-551
               

               
Cow position:
               
chr14:9308160-9308546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
164-551
               

               
Cow position:
               
chr14:25404002-25403624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
171-505
               

               
Cow position:
               
chr14:25378558-25378214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
6, 41
               

               
Conread position:
               
171-507
               

               
Cow position:
               
chr14:24796491-24796144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
171-520
               

               
Cow position:
               
chr14:35018816-35018463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 56
               

               
Conread position:
               
171-550
               

               
Cow position:
               
chr14:8784138-8784494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 51
               

               
Conread position:
               
172-551
               

               
Cow position:
               
chr14:27592018-27591626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
176-551
               

               
Cow position:
               
chr14:106624-106255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 41
               

               
Conread position:
               
191-464
               

               
Cow position:
               
chr14:26191142-26190860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
110, 31
               

               
Conread position:
               
196-551
               

               
Cow position:
               
chr14:39778719-39779073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
197-520
               

               
Cow position:
               
chr14:23107291-23107619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
73, 34
               

               
Conread position:
               
198-541
               

               
Cow position:
               
chr14:48412914-48412565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 5
               

               
Conread position:
               
198-551
               

               
Cow position:
               
chr14:11508267-11507923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
5, 25
               

               
Conread position:
               
201-482
               

               
Cow position:
               
chr14:20385013-20384730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
201-516
               

               
Cow position:
               
chr14:40033967-40034259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
259, 18
               

               
Conread position:
               
201-541
               

               
Cow position:
               
chr14:14187304-14187643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
201-551
               

               
Cow position:
               
chr14:27791516-27791850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 15
               

               
Conread position:
               
201-551
               

               
Cow position:
               
chr14:39775078-39774733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 17
               

               
Conread position:
               
202-490
               

               
Cow position:
               
chr14:33309530-33309248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
202-506
               

               
Cow position:
               
chr14:37884437-37884133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
206-542
               

               
Cow position:
               
chr14:3564261-3564592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
101, 16
               

               
Conread position:
               
207-551
               

               
Cow position:
               
chr14:47584683-47584329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
214-551
               

               
Cow position:
               
chr14:43249571-43249904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
173, 55
               

               
Conread position:
               
216-551
               

               
Cow position:
               
chr14:33462155-33462478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 5
               

               
Conread position:
               
223-548
               

               
Cow position:
               
chr14:44742389-44742070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
233-483
               

               
Cow position:
               
chr14:6175586-6175838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
242-520
               

               
Cow position:
               
chr14:38296271-38295983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
47, 163
               

               
Conread position:
               
250-520
               

               
Cow position:
               
chr14:11820101-11819831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
254-551
               

               
Cow position:
               
chr14:1728040-1727744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 39
               

               
Conread position:
               
257-549
               

               
Cow position:
               
chr14:5365907-5366190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
273-551
               

               
Cow position:
               
chr14:35544470-35544195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
6, 70
               

               
Conread position:
               
274-551
               

               
Cow position:
               
chr14:28090933-28090655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 253
               

               
Conread position:
               
275-509
               

               
Cow position:
               
chr14:24785988-24786214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
278-551
               

               
Cow position:
               
chr14:41756310-41756578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
21, 25
               

               
Conread position:
               
282-551
               

               
Cow position:
               
chr14:19633234-19633500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
178, 228
               

               
Conread position:
               
285-534
               

               
Cow position:
               
chr14:36151462-36151699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
285-551
               

               
Cow position:
               
chr14:19221941-19222199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
93, 6
               

               
Conread position:
               
286-551
               

               
Cow position:
               
chr14:20069456-20069202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
171, 14
               

               
Conread position:
               
289-551
               

               
Cow position:
               
chr14:46735365-46735637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
291-518
               

               
Cow position:
               
chr14:26410568-26410791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
291-551
               

               
Cow position:
               
chr14:34355631-34355382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
5, 122
               

               
Conread position:
               
292-551
               

               
Cow position:
               
chr14:44025959-44026218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
92, 230
               

               
Conread position:
               
294-520
               

               
Cow position:
               
chr14:25362410-25362640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
294-551
               

               
Cow position:
               
chr14:26880740-26880486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 155
               

               
Conread position:
               
295-538
               

               
Cow position:
               
chr14:8080038-8080261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 113
               

               
Conread position:
               
297-516
               

               
Cow position:
               
chr14:12614023-12613814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
81, 5
               

               
Conread position:
               
299-551
               

               
Cow position:
               
chr14:8495224-8495473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
161, 133
               

               
Conread position:
               
300-534
               

               
Cow position:
               
chr14:23527013-23527239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
161, 64
               

               
Conread position:
               
300-542
               

               
Cow position:
               
chr14:44878716-44878475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
300-549
               

               
Cow position:
               
chr14:40253293-40253541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 101
               

               
Conread position:
               
304-520
               

               
Cow position:
               
chr14:24797497-24797287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
154, 102
               

               
Conread position:
               
304-537
               

               
Cow position:
               
chr14:23729649-23729421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 63
               

               
Conread position:
               
304-542
               

               
Cow position:
               
chr14:35700503-35700747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
304-550
               

               
Cow position:
               
chr14:46965636-46965879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
156, 126
               

               
Conread position:
               
305-520
               

               
Cow position:
               
chr14:50027298-50027507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 112
               

               
Conread position:
               
306-551
               

               
Cow position:
               
chr14:44383125-44382880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 186
               

               
Conread position:
               
307-496
               

               
Cow position:
               
chr14:15514094-15514287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
6, 65
               

               
Conread position:
               
308-541
               

               
Cow position:
               
chr14:14280494-14280727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
312-551
               

               
Cow position:
               
chr14:39807373-39807139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
152, 52
               

               
Conread position:
               
316-551
               

               
Cow position:
               
chr14:39518784-39519015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
327-551
               

               
Cow position:
               
chr14:11641470-11641256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
133, 77
               

               
Conread position:
               
327-551
               

               
Cow position:
               
chr14:24581025-24581255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
133, 10
               

               
Conread position:
               
335-551
               

               
Cow position:
               
chr14:25695488-25695700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
54, 93
               
Show alignments to all cow chromosomes.