• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Pig1-35E01
        

               
Conread position:
               
44-303
               

               
Cow position:
               
chr17:17035228-17034961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 132
               

               
Conread position:
               
44-412
               

               
Cow position:
               
chr17:21325621-21325231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
49-518
               

               
Cow position:
               
chr17:27429829-27429371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
49-551
               

               
Cow position:
               
chr17:32989747-32989257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 127
               

               
Conread position:
               
49-551
               

               
Cow position:
               
chr17:32993352-32993849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 128
               

               
Conread position:
               
62-551
               

               
Cow position:
               
chr17:14004073-14003593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
63-518
               

               
Cow position:
               
chr17:1035339-1035811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
63-551
               

               
Cow position:
               
chr17:24974202-24973714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 103
               

               
Conread position:
               
64-333
               

               
Cow position:
               
chr17:18766731-18767016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
65-256
               

               
Cow position:
               
chr17:20881561-20881751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
132, 22
               

               
Conread position:
               
65-506
               

               
Cow position:
               
chr17:24490801-24490327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
31, 170
               

               
Conread position:
               
65-551
               

               
Cow position:
               
chr17:18860483-18860954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
66-376
               

               
Cow position:
               
chr17:9824923-9824603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 105
               

               
Conread position:
               
66-376
               

               
Cow position:
               
chr17:36864884-36864565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
66-497
               

               
Cow position:
               
chr17:36791382-36790954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
66-520
               

               
Cow position:
               
chr17:12325514-12325955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
66-542
               

               
Cow position:
               
chr17:5422825-5423298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
66-542
               

               
Cow position:
               
chr17:6424010-6423534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 126
               

               
Conread position:
               
66-551
               

               
Cow position:
               
chr17:5224635-5224167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
66-551
               

               
Cow position:
               
chr17:26818216-26818688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
67-333
               

               
Cow position:
               
chr17:12959351-12959082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
67-343
               

               
Cow position:
               
chr17:32332835-32333125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 166
               

               
Conread position:
               
67-376
               

               
Cow position:
               
chr17:40639202-40638884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 165
               

               
Conread position:
               
68-312
               

               
Cow position:
               
chr17:42150642-42150395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 162
               

               
Conread position:
               
68-479
               

               
Cow position:
               
chr17:12306151-12306563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
68-537
               

               
Cow position:
               
chr17:9854236-9853758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
29, 172
               

               
Conread position:
               
68-551
               

               
Cow position:
               
chr17:29292136-29292605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
69-263
               

               
Cow position:
               
chr17:22081270-22081465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
69-267
               

               
Cow position:
               
chr17:24895331-24895120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
14, 164
               

               
Conread position:
               
69-296
               

               
Cow position:
               
chr17:7959431-7959199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
69-338
               

               
Cow position:
               
chr17:17044081-17044361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
69-338
               

               
Cow position:
               
chr17:21471933-21472203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 153
               

               
Conread position:
               
69-340
               

               
Cow position:
               
chr17:8815440-8815160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 75
               

               
Conread position:
               
69-343
               

               
Cow position:
               
chr17:9950401-9950697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 164
               

               
Conread position:
               
69-357
               

               
Cow position:
               
chr17:21039809-21039517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
69-435
               

               
Cow position:
               
chr17:20874655-20874266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 169
               

               
Conread position:
               
69-454
               

               
Cow position:
               
chr17:24928735-24928339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
27, 170
               

               
Conread position:
               
69-487
               

               
Cow position:
               
chr17:10458681-10459111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
69-494
               

               
Cow position:
               
chr17:3577782-3577356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
69-506
               

               
Cow position:
               
chr17:24824499-24824058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 166
               

               
Conread position:
               
69-542
               

               
Cow position:
               
chr17:15102635-15103115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 166
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr17:5280396-5280878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
8, 164
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr17:10528477-10528977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
28, 161
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr17:16371514-16371014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr17:20780778-20780274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 239
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr17:21959427-21959915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 173
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr17:32138159-32138636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 178
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr17:38615219-38614720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 171
               

               
Conread position:
               
70-327
               

               
Cow position:
               
chr17:9932059-9932319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
28, 93
               

               
Conread position:
               
70-337
               

               
Cow position:
               
chr17:29995183-29995465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
27, 163
               

               
Conread position:
               
70-375
               

               
Cow position:
               
chr17:34790812-34791131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
11, 108
               

               
Conread position:
               
70-426
               

               
Cow position:
               
chr17:25616497-25616145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
70-548
               

               
Cow position:
               
chr17:32418864-32419352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
70-550
               

               
Cow position:
               
chr17:11397919-11397435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
70-551
               

               
Cow position:
               
chr17:11664326-11664824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
70-551
               

               
Cow position:
               
chr17:29084420-29083970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
71-268
               

               
Cow position:
               
chr17:21718746-21718951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
71-286
               

               
Cow position:
               
chr17:30501561-30501786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
7, 209
               

               
Conread position:
               
71-497
               

               
Cow position:
               
chr17:8836699-8837134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
7, 159
               

               
Conread position:
               
71-505
               

               
Cow position:
               
chr17:4601311-4601741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
71-520
               

               
Cow position:
               
chr17:30713597-30713144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 164
               

               
Conread position:
               
71-521
               

               
Cow position:
               
chr17:23246437-23246002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
71-538
               

               
Cow position:
               
chr17:20157859-20157394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 179
               

               
Conread position:
               
72-267
               

               
Cow position:
               
chr17:10016527-10016326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr17:25473029-25473300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
12, 102
               

               
Conread position:
               
72-353
               

               
Cow position:
               
chr17:25800634-25800925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
72-355
               

               
Cow position:
               
chr17:33154908-33155200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
72-535
               

               
Cow position:
               
chr17:33271419-33271899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
72-551
               

               
Cow position:
               
chr17:11101567-11102030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
73-309
               

               
Cow position:
               
chr17:37340781-37341031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
73-427
               

               
Cow position:
               
chr17:1040977-1040629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
73-551
               

               
Cow position:
               
chr17:21003582-21004067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 157
               

               
Conread position:
               
74-520
               

               
Cow position:
               
chr17:25128105-25128558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 99
               

               
Conread position:
               
75-406
               

               
Cow position:
               
chr17:25513871-25514219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 155
               

               
Conread position:
               
75-520
               

               
Cow position:
               
chr17:32471544-32472000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
75-543
               

               
Cow position:
               
chr17:21243562-21244022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
77-513
               

               
Cow position:
               
chr17:22564423-22563981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
78-357
               

               
Cow position:
               
chr17:18934501-18934210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
78-369
               

               
Cow position:
               
chr17:39606664-39606373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
78-431
               

               
Cow position:
               
chr17:20884769-20884402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
19, 156
               

               
Conread position:
               
80-332
               

               
Cow position:
               
chr17:33164578-33164839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
17, 151
               

               
Conread position:
               
80-339
               

               
Cow position:
               
chr17:25511484-25511213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
80-342
               

               
Cow position:
               
chr17:40412821-40412554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
80-377
               

               
Cow position:
               
chr17:24751154-24750850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
80-378
               

               
Cow position:
               
chr17:3153326-3153639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
17, 147
               

               
Conread position:
               
80-410
               

               
Cow position:
               
chr17:35573989-35573663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
80-441
               

               
Cow position:
               
chr17:6318626-6318988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
80-541
               

               
Cow position:
               
chr17:7810504-7810969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 141
               

               
Conread position:
               
80-541
               

               
Cow position:
               
chr17:11831876-11832366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
80-541
               

               
Cow position:
               
chr17:36275579-36275131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
8, 156
               

               
Conread position:
               
80-550
               

               
Cow position:
               
chr17:18490775-18490298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 116
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr17:11215651-11216119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 147
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr17:13243812-13244262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr17:20022272-20022753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 152
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr17:33288416-33288890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 88
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr17:33933506-33933982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
81-264
               

               
Cow position:
               
chr17:21677132-21676940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 147
               

               
Conread position:
               
81-287
               

               
Cow position:
               
chr17:946597-946385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
81-367
               

               
Cow position:
               
chr17:22051350-22051650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
81-429
               

               
Cow position:
               
chr17:32349304-32348955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
81-462
               

               
Cow position:
               
chr17:1562550-1562922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
81-496
               

               
Cow position:
               
chr17:908980-908562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 93
               

               
Conread position:
               
81-506
               

               
Cow position:
               
chr17:20071862-20072269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 147
               

               
Conread position:
               
81-541
               

               
Cow position:
               
chr17:24587864-24587392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
81-551
               

               
Cow position:
               
chr17:31480789-31481278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 157
               

               
Conread position:
               
82-309
               

               
Cow position:
               
chr17:40276976-40276746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
82-310
               

               
Cow position:
               
chr17:21466018-21466257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 150
               

               
Conread position:
               
82-354
               

               
Cow position:
               
chr17:35051860-35051563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
15, 97
               

               
Conread position:
               
82-429
               

               
Cow position:
               
chr17:3467991-3467648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
16, 92
               

               
Conread position:
               
82-463
               

               
Cow position:
               
chr17:4105752-4106135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
82-463
               

               
Cow position:
               
chr17:4121487-4121871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
82-513
               

               
Cow position:
               
chr17:25612327-25611892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
82-514
               

               
Cow position:
               
chr17:12447162-12447601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
82-551
               

               
Cow position:
               
chr17:14049970-14050428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
83-375
               

               
Cow position:
               
chr17:1025595-1025885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
83-484
               

               
Cow position:
               
chr17:1634255-1634654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
83-551
               

               
Cow position:
               
chr17:44146734-44147208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
85-551
               

               
Cow position:
               
chr17:21114718-21115184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
86-384
               

               
Cow position:
               
chr17:12510749-12511049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
86-466
               

               
Cow position:
               
chr17:31037141-31037534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 146
               

               
Conread position:
               
86-502
               

               
Cow position:
               
chr17:12536240-12536658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
86-550
               

               
Cow position:
               
chr17:25901444-25900964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 154
               

               
Conread position:
               
86-551
               

               
Cow position:
               
chr17:20992802-20993276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 94
               

               
Conread position:
               
86-551
               

               
Cow position:
               
chr17:29714978-29715422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
87-331
               

               
Cow position:
               
chr17:45296639-45296394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
87-421
               

               
Cow position:
               
chr17:21757910-21758257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
89-551
               

               
Cow position:
               
chr17:43717107-43717544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
8, 85
               

               
Conread position:
               
91-542
               

               
Cow position:
               
chr17:9697454-9697928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 5
               

               
Conread position:
               
92-506
               

               
Cow position:
               
chr17:26000349-25999922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
5, 144
               

               
Conread position:
               
96-366
               

               
Cow position:
               
chr17:5372307-5372585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
96-496
               

               
Cow position:
               
chr17:1063393-1063005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
43, 76
               

               
Conread position:
               
96-503
               

               
Cow position:
               
chr17:24773901-24773492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
96-543
               

               
Cow position:
               
chr17:39771627-39771168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 105
               

               
Conread position:
               
96-551
               

               
Cow position:
               
chr17:23100997-23101446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
96-551
               

               
Cow position:
               
chr17:28284811-28285262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
96-551
               

               
Cow position:
               
chr17:36330742-36331202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
99-409
               

               
Cow position:
               
chr17:11912283-11912596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
100-418
               

               
Cow position:
               
chr17:40852189-40851875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
100-522
               

               
Cow position:
               
chr17:10447134-10446705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 135
               

               
Conread position:
               
104-489
               

               
Cow position:
               
chr17:24149402-24149000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
8, 128
               

               
Conread position:
               
107-405
               

               
Cow position:
               
chr17:23516730-23517037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
108-333
               

               
Cow position:
               
chr17:26575012-26575254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 172
               

               
Conread position:
               
108-461
               

               
Cow position:
               
chr17:6329322-6328961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
82, 117
               

               
Conread position:
               
108-551
               

               
Cow position:
               
chr17:5000391-5000810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 53
               

               
Conread position:
               
108-551
               

               
Cow position:
               
chr17:40421868-40421433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
116-550
               

               
Cow position:
               
chr17:30665474-30665039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
118-550
               

               
Cow position:
               
chr17:18108886-18109321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
124-551
               

               
Cow position:
               
chr17:18495325-18495743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 105
               

               
Conread position:
               
131-434
               

               
Cow position:
               
chr17:6848979-6848681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
137-487
               

               
Cow position:
               
chr17:12591355-12590988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
137-489
               

               
Cow position:
               
chr17:32273509-32273861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
137-492
               

               
Cow position:
               
chr17:29157594-29157238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
137-516
               

               
Cow position:
               
chr17:4225325-4225696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
137-542
               

               
Cow position:
               
chr17:35126883-35126487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 25
               

               
Conread position:
               
137-551
               

               
Cow position:
               
chr17:40288823-40289239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
138-344
               

               
Cow position:
               
chr17:11306387-11306186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
139-376
               

               
Cow position:
               
chr17:27202868-27203109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
48, 88
               

               
Conread position:
               
139-409
               

               
Cow position:
               
chr17:15340576-15340851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
48, 31
               

               
Conread position:
               
139-520
               

               
Cow position:
               
chr17:40331940-40331560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
140-356
               

               
Cow position:
               
chr17:37816018-37816236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
140-376
               

               
Cow position:
               
chr17:34751230-34751471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 27
               

               
Conread position:
               
140-551
               

               
Cow position:
               
chr17:18592618-18592203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
140-551
               

               
Cow position:
               
chr17:24554174-24553768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 88
               

               
Conread position:
               
141-548
               

               
Cow position:
               
chr17:8079486-8079084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
141-551
               

               
Cow position:
               
chr17:21335519-21335934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
142-364
               

               
Cow position:
               
chr17:22016916-22017141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
156, 20
               

               
Conread position:
               
142-551
               

               
Cow position:
               
chr17:8544476-8544073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
142-552
               

               
Cow position:
               
chr17:1410064-1410478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
143-424
               

               
Cow position:
               
chr17:35338745-35339029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
143-445
               

               
Cow position:
               
chr17:40673542-40673251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
143-504
               

               
Cow position:
               
chr17:24822033-24821677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
146-332
               

               
Cow position:
               
chr17:18847989-18848183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 8
               

               
Conread position:
               
146-551
               

               
Cow position:
               
chr17:1060876-1061298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
147-520
               

               
Cow position:
               
chr17:17406303-17405929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
147-551
               

               
Cow position:
               
chr17:26765191-26764778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
148-493
               

               
Cow position:
               
chr17:265837-265475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
149-551
               

               
Cow position:
               
chr17:20126765-20126385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
157-387
               

               
Cow position:
               
chr17:40406604-40406367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 70
               

               
Conread position:
               
157-520
               

               
Cow position:
               
chr17:24580137-24580508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
162-477
               

               
Cow position:
               
chr17:979012-979318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
163-485
               

               
Cow position:
               
chr17:20990036-20990367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 44
               

               
Conread position:
               
165-434
               

               
Cow position:
               
chr17:33657917-33658190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
177-539
               

               
Cow position:
               
chr17:8279573-8279936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
179-392
               

               
Cow position:
               
chr17:11368712-11368932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
179-550
               

               
Cow position:
               
chr17:3503719-3503343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
179-551
               

               
Cow position:
               
chr17:30539132-30539485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
190-375
               

               
Cow position:
               
chr17:21478799-21478987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
201-520
               

               
Cow position:
               
chr17:3782154-3781835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
201-520
               

               
Cow position:
               
chr17:11156383-11156702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
201-539
               

               
Cow position:
               
chr17:28540139-28539812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
202-526
               

               
Cow position:
               
chr17:38647171-38646852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
202-529
               

               
Cow position:
               
chr17:41891951-41892287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
207-551
               

               
Cow position:
               
chr17:25541712-25542048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
211-480
               

               
Cow position:
               
chr17:21917770-21918042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
56, 96
               

               
Conread position:
               
214-464
               

               
Cow position:
               
chr17:31701531-31701285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 57
               

               
Conread position:
               
216-520
               

               
Cow position:
               
chr17:20870000-20870302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
221-551
               

               
Cow position:
               
chr17:5688268-5688584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
228-512
               

               
Cow position:
               
chr17:12059007-12059291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
228-542
               

               
Cow position:
               
chr17:15333624-15333937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
238-520
               

               
Cow position:
               
chr17:20835657-20835384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
218, 32
               

               
Conread position:
               
240-413
               

               
Cow position:
               
chr17:32009366-32009540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 125
               

               
Conread position:
               
241-551
               

               
Cow position:
               
chr17:3306931-3306632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
243-478
               

               
Cow position:
               
chr17:10510586-10510828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
245-541
               

               
Cow position:
               
chr17:8690372-8690666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
250-492
               

               
Cow position:
               
chr17:34207751-34208000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
253-506
               

               
Cow position:
               
chr17:21207080-21207329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 17
               

               
Conread position:
               
268-551
               

               
Cow position:
               
chr17:41029998-41029716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
269-551
               

               
Cow position:
               
chr17:12216037-12216315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 22
               

               
Conread position:
               
274-520
               

               
Cow position:
               
chr17:33122133-33121879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
274-551
               

               
Cow position:
               
chr17:10473875-10473599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 166
               

               
Conread position:
               
274-551
               

               
Cow position:
               
chr17:41393674-41393948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 177
               

               
Conread position:
               
274-551
               

               
Cow position:
               
chr17:42347183-42347457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
278-542
               

               
Cow position:
               
chr17:4824526-4824274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
58, 10
               

               
Conread position:
               
285-506
               

               
Cow position:
               
chr17:26881311-26881531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
289-552
               

               
Cow position:
               
chr17:15363539-15363803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
291-551
               

               
Cow position:
               
chr17:14211945-14212204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
67, 74
               

               
Conread position:
               
295-547
               

               
Cow position:
               
chr17:6858372-6858624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
93, 118
               

               
Conread position:
               
296-504
               

               
Cow position:
               
chr17:4436218-4436423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
160, 104
               

               
Conread position:
               
297-543
               

               
Cow position:
               
chr17:13672057-13672304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
145, 207
               

               
Conread position:
               
298-541
               

               
Cow position:
               
chr17:31231918-31232156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
90, 122
               

               
Conread position:
               
300-551
               

               
Cow position:
               
chr17:23337006-23337250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
160, 85
               

               
Conread position:
               
301-551
               

               
Cow position:
               
chr17:41399962-41400205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
302-531
               

               
Cow position:
               
chr17:19455303-19455523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
156, 60
               

               
Conread position:
               
302-540
               

               
Cow position:
               
chr17:27306167-27305936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
158, 96
               

               
Conread position:
               
303-496
               

               
Cow position:
               
chr17:28847659-28847852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
303-551
               

               
Cow position:
               
chr17:26183230-26182986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
85, 116
               

               
Conread position:
               
304-506
               

               
Cow position:
               
chr17:32950280-32950078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 104
               

               
Conread position:
               
304-519
               

               
Cow position:
               
chr17:21017803-21017586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 73
               

               
Conread position:
               
305-506
               

               
Cow position:
               
chr17:21312805-21312999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
155, 108
               

               
Conread position:
               
305-506
               

               
Cow position:
               
chr17:35311432-35311227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
305-539
               

               
Cow position:
               
chr17:15133154-15132942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
305-542
               

               
Cow position:
               
chr17:11056365-11056602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 138
               

               
Conread position:
               
305-551
               

               
Cow position:
               
chr17:1295564-1295807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
72, 136
               

               
Conread position:
               
305-551
               

               
Cow position:
               
chr17:24550182-24549934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
73, 202
               

               
Conread position:
               
311-550
               

               
Cow position:
               
chr17:21031782-21031553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 117
               

               
Conread position:
               
311-551
               

               
Cow position:
               
chr17:27667188-27667430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
15, 213
               

               
Conread position:
               
314-533
               

               
Cow position:
               
chr17:29040469-29040684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
318-547
               

               
Cow position:
               
chr17:31490-31261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 205
               

               
Conread position:
               
320-552
               

               
Cow position:
               
chr17:25168309-25168076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
58, 188
               

               
Conread position:
               
326-549
               

               
Cow position:
               
chr17:3498679-3498898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 87
               

               
Conread position:
               
327-520
               

               
Cow position:
               
chr17:1327987-1328179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
133, 37
               

               
Conread position:
               
336-541
               

               
Cow position:
               
chr17:1358825-1359023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
5, 76
               
Show alignments to all cow chromosomes.