Cow genome map

Conread name: Pig1-35E01

Conread position: 40-541
Cow position: chr23:3967314-3967812 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 349
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 72, 16

Conread position: 63-454
Cow position: chr23:34356860-34356454 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 268
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 33

Conread position: 66-285
Cow position: chr23:40737798-40738027 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 32, 14

Conread position: 66-333
Cow position: chr23:13202150-13202423 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 66

Conread position: 66-362
Cow position: chr23:2359092-2358801 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 30

Conread position: 66-439
Cow position: chr23:1583736-1583363 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 260
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 16, 79

Conread position: 66-535
Cow position: chr23:15286936-15287393 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 333
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 31, 14

Conread position: 66-539
Cow position: chr23:26986051-26986537 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 50

Conread position: 66-547
Cow position: chr23:3247811-3247317 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 176

Conread position: 66-549
Cow position: chr23:1429014-1428544 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 318
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 131, 29

Conread position: 66-551
Cow position: chr23:34416782-34416291 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 336
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 14, 169

Conread position: 67-251
Cow position: chr23:23104274-23104462 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 31, 13

Conread position: 67-299
Cow position: chr23:22238604-22238844 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 30, 25

Conread position: 67-546
Cow position: chr23:187401-186901 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 171

Conread position: 67-551
Cow position: chr23:26841639-26841174 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 338
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 31, 106

Conread position: 68-268
Cow position: chr23:7155484-7155685 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 99

Conread position: 68-296
Cow position: chr23:4844824-4844587 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 44, 20

Conread position: 68-335
Cow position: chr23:19565662-19565385 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 98

Conread position: 68-357
Cow position: chr23:3293902-3293606 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 29, 12

Conread position: 68-454
Cow position: chr23:3281897-3282294 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 289
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 21

Conread position: 68-551
Cow position: chr23:1883605-1883118 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 20

Conread position: 68-551
Cow position: chr23:39778610-39778138 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 12

Conread position: 69-268
Cow position: chr23:9131750-9131953 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 11

Conread position: 69-268
Cow position: chr23:24718587-24718794 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 9, 109

Conread position: 69-288
Cow position: chr23:1194280-1194503 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 31, 107

Conread position: 69-338
Cow position: chr23:35965362-35965076 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 8, 25

Conread position: 69-344
Cow position: chr23:18748861-18749138 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 28, 96

Conread position: 69-346
Cow position: chr23:5881307-5881593 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 8, 102

Conread position: 69-361
Cow position: chr23:11081472-11081165 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 24

Conread position: 69-382
Cow position: chr23:11212715-11212395 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 43, 19

Conread position: 69-396
Cow position: chr23:9226488-9226149 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 228
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 24

Conread position: 69-429
Cow position: chr23:18286398-18286039 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 252
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 105

Conread position: 69-450
Cow position: chr23:39049225-39049604 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 266
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 29

Conread position: 69-478
Cow position: chr23:4646722-4646308 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 103

Conread position: 69-495
Cow position: chr23:16689852-16690284 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 295
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 28, 11

Conread position: 69-504
Cow position: chr23:24704498-24704048 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 309
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 72

Conread position: 69-517
Cow position: chr23:1536530-1536083 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 293
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 26

Conread position: 69-520
Cow position: chr23:8063745-8063305 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 312
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 14, 98

Conread position: 69-539
Cow position: chr23:8293726-8293238 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 333
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 17, 168

Conread position: 69-551
Cow position: chr23:534442-533955 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 104

Conread position: 69-551
Cow position: chr23:20744371-20744864 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 10

Conread position: 69-551
Cow position: chr23:21788554-21789046 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 328
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 28, 156

Conread position: 70-350
Cow position: chr23:11225069-11224779 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 190
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 201

Conread position: 70-350
Cow position: chr23:20539596-20539304 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 24, 83

Conread position: 70-395
Cow position: chr23:1438491-1438173 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 27, 10

Conread position: 70-409
Cow position: chr23:12363405-12363756 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 107

Conread position: 70-510
Cow position: chr23:18901856-18902287 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 18

Conread position: 70-520
Cow position: chr23:1877683-1878119 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 107

Conread position: 70-527
Cow position: chr23:8698639-8698189 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 167

Conread position: 70-551
Cow position: chr23:29626640-29626139 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 218

Conread position: 71-281
Cow position: chr23:27849206-27848992 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 26, 158

Conread position: 71-355
Cow position: chr23:19872486-19872758 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 12, 123

Conread position: 71-462
Cow position: chr23:5426652-5426240 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 167

Conread position: 71-551
Cow position: chr23:40778476-40777988 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 155

Conread position: 72-345
Cow position: chr23:1863675-1863398 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 16, 72

Conread position: 72-442
Cow position: chr23:16744755-16744376 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 270
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 103

Conread position: 72-481
Cow position: chr23:30585439-30585870 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 288
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 37, 160

Conread position: 72-498
Cow position: chr23:29801647-29801207 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 277
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 25, 161

Conread position: 73-506
Cow position: chr23:2281977-2282407 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 75-374
Cow position: chr23:1222032-1222342 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 49

Conread position: 75-466
Cow position: chr23:5451531-5451128 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 161

Conread position: 77-307
Cow position: chr23:20093035-20093272 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 155

Conread position: 78-266
Cow position: chr23:6179342-6179536 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 148

Conread position: 78-346
Cow position: chr23:33629128-33628851 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 58

Conread position: 80-288
Cow position: chr23:17597626-17597415 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 17, 93

Conread position: 80-288
Cow position: chr23:40500892-40501109 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 112

Conread position: 80-338
Cow position: chr23:1981469-1981721 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 17, 33

Conread position: 80-342
Cow position: chr23:26825260-26825007 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 126, 13

Conread position: 80-376
Cow position: chr23:3244711-3245020 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 116

Conread position: 80-376
Cow position: chr23:22573702-22574021 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 98

Conread position: 80-422
Cow position: chr23:34611292-34611621 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 17, 72

Conread position: 80-454
Cow position: chr23:4726996-4726607 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 270
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 175

Conread position: 80-514
Cow position: chr23:1884969-1885418 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 300
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 17, 152

Conread position: 80-520
Cow position: chr23:4968327-4968767 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 33

Conread position: 80-520
Cow position: chr23:16880966-16881405 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 70

Conread position: 80-540
Cow position: chr23:26949395-26948926 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 321
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 18, 63

Conread position: 80-551
Cow position: chr23:4578830-4579312 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 106

Conread position: 80-551
Cow position: chr23:10853249-10852777 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 325
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 31, 16

Conread position: 80-551
Cow position: chr23:25864490-25864957 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 197

Conread position: 81-336
Cow position: chr23:24966258-24966529 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 153

Conread position: 81-551
Cow position: chr23:24509887-24509428 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 122

Conread position: 82-342
Cow position: chr23:16961488-16961225 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 16, 112

Conread position: 82-377
Cow position: chr23:24685442-24685146 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 15, 81

Conread position: 82-404
Cow position: chr23:5732739-5732417 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 15, 82

Conread position: 82-491
Cow position: chr23:2501655-2502067 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 62

Conread position: 83-551
Cow position: chr23:1290507-1290025 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 101

Conread position: 84-395
Cow position: chr23:5795676-5795354 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 13, 94

Conread position: 84-405
Cow position: chr23:35938528-35938208 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 55, 77

Conread position: 84-543
Cow position: chr23:9599686-9599229 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 85-551
Cow position: chr23:14739641-14739175 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 23

Conread position: 86-549
Cow position: chr23:7845486-7845013 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 77

Conread position: 86-553
Cow position: chr23:14838563-14839012 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 316
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 11, 31

Conread position: 89-439
Cow position: chr23:7361290-7360950 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 238
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 7, 39

Conread position: 90-538
Cow position: chr23:21452539-21452995 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 82

Conread position: 92-406
Cow position: chr23:5436809-5437133 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 215
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 5, 142

Conread position: 96-268
Cow position: chr23:36022605-36022777 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 73

Conread position: 96-338
Cow position: chr23:22587065-22586822 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 129

Conread position: 99-358
Cow position: chr23:17486643-17486913 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 75

Conread position: 99-520
Cow position: chr23:26632984-26632552 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 64

Conread position: 99-551
Cow position: chr23:18802083-18802548 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 316
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 137

Conread position: 99-551
Cow position: chr23:31494051-31493604 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 137

Conread position: 101-295
Cow position: chr23:4501923-4501734 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 63

Conread position: 108-361
Cow position: chr23:1403651-1403894 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 61, 32

Conread position: 110-475
Cow position: chr23:20248524-20248902 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 242
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 122

Conread position: 110-542
Cow position: chr23:29345607-29346025 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 292
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 77, 48

Conread position: 114-509
Cow position: chr23:6367763-6367369 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 48

Conread position: 124-548
Cow position: chr23:2799730-2799296 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 19

Conread position: 125-361
Cow position: chr23:8917525-8917764 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 35, 45

Conread position: 125-551
Cow position: chr23:33601385-33601795 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 285
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 90

Conread position: 128-444
Cow position: chr23:5540297-5539991 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 70, 39

Conread position: 130-485
Cow position: chr23:21765066-21764705 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 29

Conread position: 130-506
Cow position: chr23:39775875-39775498 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 265
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 9, 35

Conread position: 132-551
Cow position: chr23:1923693-1924108 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 36

Conread position: 133-343
Cow position: chr23:40637404-40637184 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 43, 88

Conread position: 137-383
Cow position: chr23:16076025-16076271 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 61, 30

Conread position: 137-512
Cow position: chr23:1397897-1398276 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 270
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 33

Conread position: 138-331
Cow position: chr23:35368906-35369105 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 49

Conread position: 139-342
Cow position: chr23:4470361-4470572 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 23

Conread position: 139-354
Cow position: chr23:21439863-21440084 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 59, 28

Conread position: 139-362
Cow position: chr23:24926954-24926721 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 81

Conread position: 139-423
Cow position: chr23:21502493-21502789 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 61, 32

Conread position: 139-462
Cow position: chr23:36018290-36017955 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 88

Conread position: 139-506
Cow position: chr23:33717401-33717777 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 89

Conread position: 139-541
Cow position: chr23:11380112-11380525 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 284
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 21, 29

Conread position: 139-543
Cow position: chr23:1701028-1700652 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 287
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 59, 26

Conread position: 139-550
Cow position: chr23:30662498-30662898 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 85

Conread position: 140-462
Cow position: chr23:2487852-2488172 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 88

Conread position: 140-506
Cow position: chr23:25378781-25378422 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 27

Conread position: 141-520
Cow position: chr23:29034450-29034065 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 30

Conread position: 142-482
Cow position: chr23:1776505-1776840 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 60

Conread position: 142-551
Cow position: chr23:9268716-9268315 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 85

Conread position: 144-551
Cow position: chr23:29458965-29459369 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 23

Conread position: 146-506
Cow position: chr23:5707124-5706767 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 14

Conread position: 146-541
Cow position: chr23:17404970-17404583 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 274
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 52, 26

Conread position: 147-440
Cow position: chr23:1767960-1767661 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 40, 80

Conread position: 147-542
Cow position: chr23:11045617-11045214 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 20

Conread position: 149-551
Cow position: chr23:24867435-24867027 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 150-469
Cow position: chr23:40844778-40844456 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 214
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 35

Conread position: 152-439
Cow position: chr23:4959447-4959732 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 77

Conread position: 153-338
Cow position: chr23:348824-349017 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 43, 18

Conread position: 153-541
Cow position: chr23:6592582-6592958 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 267
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 74

Conread position: 154-483
Cow position: chr23:1742476-1742147 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 8

Conread position: 161-551
Cow position: chr23:11473387-11473785 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 30

Conread position: 162-434
Cow position: chr23:19774885-19774611 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 67

Conread position: 162-512
Cow position: chr23:27544943-27544590 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 10

Conread position: 162-512
Cow position: chr23:40891479-40891122 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 73

Conread position: 162-520
Cow position: chr23:37223957-37224314 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 23, 50

Conread position: 163-376
Cow position: chr23:1876827-1876606 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 64

Conread position: 172-333
Cow position: chr23:5400768-5400604 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 50

Conread position: 172-551
Cow position: chr23:10014633-10014270 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 263
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 52

Conread position: 172-551
Cow position: chr23:11845382-11845012 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 22, 58

Conread position: 172-551
Cow position: chr23:40781433-40781053 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 12

Conread position: 185-520
Cow position: chr23:33940069-33940404 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 224
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 144, 31

Conread position: 193-551
Cow position: chr23:16563919-16563567 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 29

Conread position: 196-542
Cow position: chr23:4562963-4562615 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 231
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 105, 15

Conread position: 198-549
Cow position: chr23:36309497-36309154 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 5, 27

Conread position: 202-429
Cow position: chr23:1921155-1921385 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 96, 20

Conread position: 202-551
Cow position: chr23:19001997-19002343 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 46

Conread position: 203-520
Cow position: chr23:39806940-39806625 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 19

Conread position: 203-551
Cow position: chr23:18322356-18322694 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 19

Conread position: 207-551
Cow position: chr23:2316854-2316531 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 180, 14

Conread position: 210-551
Cow position: chr23:9594769-9595104 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 12, 31

Conread position: 213-492
Cow position: chr23:1490103-1489837 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 217-520
Cow position: chr23:4608322-4608630 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 37, 54

Conread position: 221-549
Cow position: chr23:1647673-1647346 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 200

Conread position: 237-551
Cow position: chr23:1670941-1670642 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 52, 34

Conread position: 253-535
Cow position: chr23:15056619-15056900 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 10

Conread position: 266-520
Cow position: chr23:2259589-2259845 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 23, 7

Conread position: 271-520
Cow position: chr23:1991426-1991675 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 90

Conread position: 274-531
Cow position: chr23:809167-808907 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 161

Conread position: 275-550
Cow position: chr23:14191549-14191278 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 10

Conread position: 275-551
Cow position: chr23:29824082-29824339 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 185, 23

Conread position: 275-551
Cow position: chr23:41285914-41285654 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 10

Conread position: 277-435
Cow position: chr23:18107344-18107508 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 279-511
Cow position: chr23:35254246-35254476 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 21

Conread position: 285-484
Cow position: chr23:22399386-22399190 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 171, 40

Conread position: 285-551
Cow position: chr23:1605663-1605404 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 175, 112

Conread position: 288-506
Cow position: chr23:11081062-11080848 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 12, 74

Conread position: 288-551
Cow position: chr23:4437806-4437544 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 237

Conread position: 291-552
Cow position: chr23:25408813-25408562 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 94

Conread position: 295-538
Cow position: chr23:3727419-3727663 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 83, 229

Conread position: 296-520
Cow position: chr23:38248871-38248652 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 15, 97

Conread position: 296-551
Cow position: chr23:20752991-20752738 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 12, 119

Conread position: 298-505
Cow position: chr23:36075844-36076053 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 119

Conread position: 300-542
Cow position: chr23:21343278-21343512 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 14, 75

Conread position: 300-551
Cow position: chr23:33232937-33233180 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 112

Conread position: 302-525
Cow position: chr23:614933-615165 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 181

Conread position: 302-551
Cow position: chr23:406203-406433 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 158, 56

Conread position: 302-551
Cow position: chr23:10415058-10415303 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 64, 53

Conread position: 303-551
Cow position: chr23:1690756-1690513 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 153, 27

Conread position: 305-506
Cow position: chr23:25189311-25189109 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 130

Conread position: 305-520
Cow position: chr23:38854770-38854982 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 155, 79

Conread position: 305-542
Cow position: chr23:3208654-3208883 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 307-551
Cow position: chr23:2371338-2371105 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 56

Conread position: 308-551
Cow position: chr23:360952-361186 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 195, 103

Conread position: 312-529
Cow position: chr23:792072-792285 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 152, 47

Conread position: 327-520
Cow position: chr23:3140808-3140616 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 133, 32

Conread position: 336-551
Cow position: chr23:14895866-14896080 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 124, 6

Show alignments to all cow chromosomes.