Cow genome map


           Conread name:
           Pig1-35E01
        

               Conread position:
               3-333
               

               Cow position:
               chr25:35338913-35339250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 176
               

               Conread position:
               52-520
               

               Cow position:
               chr25:33457954-33457454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               336
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               15, 55
               

               Conread position:
               55-488
               

               Cow position:
               chr25:12899989-12899536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 25
               

               Conread position:
               62-518
               

               Cow position:
               chr25:30278978-30279458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 172
               

               Conread position:
               63-384
               

               Cow position:
               chr25:11432730-11433070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 85
               

               Conread position:
               65-517
               

               Cow position:
               chr25:19679563-19679093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               66-313
               

               Cow position:
               chr25:13826644-13826396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               31, 81
               

               Conread position:
               66-353
               

               Cow position:
               chr25:13621149-13621445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               66-413
               

               Cow position:
               chr25:12609556-12609199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               66-462
               

               Cow position:
               chr25:26089613-26090005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               12, 102
               

               Conread position:
               66-551
               

               Cow position:
               chr25:11436613-11437081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 30
               

               Conread position:
               66-551
               

               Cow position:
               chr25:15273877-15273411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 130
               

               Conread position:
               67-352
               

               Cow position:
               chr25:7673515-7673205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               67-376
               

               Cow position:
               chr25:1823881-1824204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               67-405
               

               Cow position:
               chr25:6292779-6292429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               68-261
               

               Cow position:
               chr25:15349699-15349895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               68-288
               

               Cow position:
               chr25:28667839-28668067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 101
               

               Conread position:
               68-453
               

               Cow position:
               chr25:7750660-7750268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 108
               

               Conread position:
               68-551
               

               Cow position:
               chr25:17975190-17975646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               69-268
               

               Cow position:
               chr25:8347868-8347655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               28, 110
               

               Conread position:
               69-310
               

               Cow position:
               chr25:28597394-28597650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 164
               

               Conread position:
               69-354
               

               Cow position:
               chr25:12305486-12305189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               69-406
               

               Cow position:
               chr25:12509811-12510150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               29, 74
               

               Conread position:
               69-431
               

               Cow position:
               chr25:30462110-30462463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 121
               

               Conread position:
               69-448
               

               Cow position:
               chr25:20523027-20523411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               14, 107
               

               Conread position:
               69-496
               

               Cow position:
               chr25:20785377-20785811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 208
               

               Conread position:
               69-518
               

               Cow position:
               chr25:35348117-35347655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 167
               

               Conread position:
               69-551
               

               Cow position:
               chr25:3992991-3992511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 165
               

               Conread position:
               70-254
               

               Cow position:
               chr25:22565757-22565941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 43
               

               Conread position:
               70-310
               

               Cow position:
               chr25:7551159-7551397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               12, 102
               

               Conread position:
               70-533
               

               Cow position:
               chr25:12778352-12778795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 69
               

               Conread position:
               70-541
               

               Cow position:
               chr25:14833458-14833922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               316
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               13, 105
               

               Conread position:
               70-551
               

               Cow position:
               chr25:8120987-8120498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 19
               

               Conread position:
               70-553
               

               Cow position:
               chr25:21191686-21191206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 65
               

               Conread position:
               71-541
               

               Cow position:
               chr25:8511889-8512360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               315
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               71-551
               

               Cow position:
               chr25:7641247-7641732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 73
               

               Conread position:
               71-551
               

               Cow position:
               chr25:26524170-26523700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               342
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               26, 167
               

               Conread position:
               72-248
               

               Cow position:
               chr25:18934428-18934612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 101
               

               Conread position:
               72-260
               

               Cow position:
               chr25:1802817-1802622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               72-551
               

               Cow position:
               chr25:22315410-22314922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               73-551
               

               Cow position:
               chr25:30319242-30319728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 163
               

               Conread position:
               74-450
               

               Cow position:
               chr25:13272774-13272390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               75-280
               

               Cow position:
               chr25:14419898-14419693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               75-311
               

               Cow position:
               chr25:22348254-22348502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               22, 112
               

               Conread position:
               75-352
               

               Cow position:
               chr25:13768162-13767884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               75-400
               

               Cow position:
               chr25:9843385-9843043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               23, 162
               

               Conread position:
               75-430
               

               Cow position:
               chr25:26679431-26679065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 158
               

               Conread position:
               75-551
               

               Cow position:
               chr25:21192737-21193222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 93
               

               Conread position:
               76-432
               

               Cow position:
               chr25:21893537-21893173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               21, 88
               

               Conread position:
               77-309
               

               Cow position:
               chr25:18810533-18810307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               77-431
               

               Cow position:
               chr25:41150762-41151124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 159
               

               Conread position:
               77-462
               

               Cow position:
               chr25:32453228-32453589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               77-474
               

               Cow position:
               chr25:8157310-8157715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               78-285
               

               Cow position:
               chr25:9573934-9574143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 99
               

               Conread position:
               78-307
               

               Cow position:
               chr25:22298834-22298602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 96
               

               Conread position:
               80-284
               

               Cow position:
               chr25:20203107-20202901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               17, 63
               

               Conread position:
               80-285
               

               Cow position:
               chr25:36872856-36873069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 96
               

               Conread position:
               80-334
               

               Cow position:
               chr25:1840520-1840254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               17, 95
               

               Conread position:
               80-387
               

               Cow position:
               chr25:33557465-33557154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               17, 87
               

               Conread position:
               80-400
               

               Cow position:
               chr25:18201730-18202059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               17, 112
               

               Conread position:
               80-417
               

               Cow position:
               chr25:21668447-21668096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               17, 151
               

               Conread position:
               80-520
               

               Cow position:
               chr25:33550711-33550254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 200
               

               Conread position:
               80-525
               

               Cow position:
               chr25:24669253-24669687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 95
               

               Conread position:
               80-551
               

               Cow position:
               chr25:1838442-1837961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 148
               

               Conread position:
               80-551
               

               Cow position:
               chr25:18720929-18721387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               81-517
               

               Cow position:
               chr25:38135951-38135498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               81-541
               

               Cow position:
               chr25:20008333-20007871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 96
               

               Conread position:
               81-551
               

               Cow position:
               chr25:5834045-5834532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               328
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               29, 294
               

               Conread position:
               82-462
               

               Cow position:
               chr25:14720929-14720561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 82
               

               Conread position:
               82-518
               

               Cow position:
               chr25:32191848-32191421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               82-539
               

               Cow position:
               chr25:19130051-19129581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 108
               

               Conread position:
               83-268
               

               Cow position:
               chr25:31657084-31657274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               14, 83
               

               Conread position:
               83-542
               

               Cow position:
               chr25:9989906-9990361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 157
               

               Conread position:
               84-525
               

               Cow position:
               chr25:16318955-16319389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 55
               

               Conread position:
               86-333
               

               Cow position:
               chr25:11276740-11276486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               53, 38
               

               Conread position:
               86-387
               

               Cow position:
               chr25:11051715-11051410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               86-545
               

               Cow position:
               chr25:14513299-14512843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               322
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               11, 88
               

               Conread position:
               88-297
               

               Cow position:
               chr25:36873146-36873358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               9, 77
               

               Conread position:
               89-308
               

               Cow position:
               chr25:18288582-18288805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 7
               

               Conread position:
               89-354
               

               Cow position:
               chr25:7799740-7799466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               50, 136
               

               Conread position:
               96-440
               

               Cow position:
               chr25:23244822-23245182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 74
               

               Conread position:
               96-520
               

               Cow position:
               chr25:11661648-11662071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 56
               

               Conread position:
               96-551
               

               Cow position:
               chr25:20023212-20023678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 79
               

               Conread position:
               99-309
               

               Cow position:
               chr25:9107354-9107560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               98, 61
               

               Conread position:
               99-373
               

               Cow position:
               chr25:13443228-13443519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               13, 78
               

               Conread position:
               99-402
               

               Cow position:
               chr25:19363881-19364193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               99-454
               

               Cow position:
               chr25:17190575-17190927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 42
               

               Conread position:
               99-462
               

               Cow position:
               chr25:11543086-11542721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               12, 98
               

               Conread position:
               99-485
               

               Cow position:
               chr25:2624973-2624588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               99-520
               

               Cow position:
               chr25:23828951-23829369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               306
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 74
               

               Conread position:
               99-547
               

               Cow position:
               chr25:36082046-36081600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               99-551
               

               Cow position:
               chr25:26087697-26087236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 81
               

               Conread position:
               100-536
               

               Cow position:
               chr25:20402531-20402983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               310
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               12, 131
               

               Conread position:
               104-376
               

               Cow position:
               chr25:36872534-36872253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               34, 131
               

               Conread position:
               108-312
               

               Cow position:
               chr25:26306036-26306245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               57, 116
               

               Conread position:
               117-484
               

               Cow position:
               chr25:12319198-12319553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               74, 12
               

               Conread position:
               123-400
               

               Cow position:
               chr25:14157777-14157489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               32, 107
               

               Conread position:
               133-344
               

               Cow position:
               chr25:23505191-23504970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 36
               

               Conread position:
               137-363
               

               Cow position:
               chr25:36120633-36120406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               32, 46
               

               Conread position:
               137-551
               

               Cow position:
               chr25:6463900-6464308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               161, 19
               

               Conread position:
               137-551
               

               Cow position:
               chr25:41107890-41107479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               49, 89
               

               Conread position:
               138-517
               

               Cow position:
               chr25:12293613-12294000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               138-533
               

               Cow position:
               chr25:17566723-17566326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               278
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               139-345
               

               Cow position:
               chr25:40931406-40931197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               58, 29
               

               Conread position:
               139-496
               

               Cow position:
               chr25:34170081-34169727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 29
               

               Conread position:
               139-520
               

               Cow position:
               chr25:15254211-15254583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 90
               

               Conread position:
               139-540
               

               Cow position:
               chr25:20461236-20460855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               284
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               55, 28
               

               Conread position:
               141-550
               

               Cow position:
               chr25:6473956-6474378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               296
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               141-551
               

               Cow position:
               chr25:26238994-26238591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 28
               

               Conread position:
               145-497
               

               Cow position:
               chr25:10217922-10218279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               252
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               40, 15
               

               Conread position:
               146-539
               

               Cow position:
               chr25:21894758-21895150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               63, 10
               

               Conread position:
               148-551
               

               Cow position:
               chr25:6682937-6683340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 14
               

               Conread position:
               151-505
               

               Cow position:
               chr25:12840597-12840954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               26, 11
               

               Conread position:
               152-516
               

               Cow position:
               chr25:4547596-4547968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 75
               

               Conread position:
               152-542
               

               Cow position:
               chr25:21267107-21266736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               92, 25
               

               Conread position:
               156-462
               

               Cow position:
               chr25:20133199-20133506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               34, 22
               

               Conread position:
               157-454
               

               Cow position:
               chr25:4681343-4681050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 66
               

               Conread position:
               163-362
               

               Cow position:
               chr25:4948073-4947868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               35, 64
               

               Conread position:
               172-535
               

               Cow position:
               chr25:36036677-36037043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 50
               

               Conread position:
               179-365
               

               Cow position:
               chr25:14809368-14809182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               179-406
               

               Cow position:
               chr25:24052055-24051824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               132, 22
               

               Conread position:
               187-549
               

               Cow position:
               chr25:6227117-6226764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               113, 35
               

               Conread position:
               191-475
               

               Cow position:
               chr25:5921022-5920731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               107, 31
               

               Conread position:
               194-452
               

               Cow position:
               chr25:18894653-18894904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 29
               

               Conread position:
               196-551
               

               Cow position:
               chr25:25051305-25051663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 26
               

               Conread position:
               202-549
               

               Cow position:
               chr25:20076564-20076217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               88, 21
               

               Conread position:
               207-454
               

               Cow position:
               chr25:37562760-37562524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               180, 15
               

               Conread position:
               207-551
               

               Cow position:
               chr25:14118153-14117830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               99, 11
               

               Conread position:
               209-380
               

               Cow position:
               chr25:26642647-26642470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               214-384
               

               Cow position:
               chr25:7449857-7449691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               94, 56
               

               Conread position:
               214-520
               

               Cow position:
               chr25:18487725-18487422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               75, 55
               

               Conread position:
               221-520
               

               Cow position:
               chr25:5836907-5837218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               223
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               50, 150
               

               Conread position:
               232-506
               

               Cow position:
               chr25:8560908-8560632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               38, 182
               

               Conread position:
               240-551
               

               Cow position:
               chr25:7801172-7800857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 28
               

               Conread position:
               242-552
               

               Cow position:
               chr25:1735291-1735590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               67, 28
               

               Conread position:
               253-496
               

               Cow position:
               chr25:36033456-36033209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               39, 17
               

               Conread position:
               263-503
               

               Cow position:
               chr25:11054912-11054686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               35, 7
               

               Conread position:
               269-551
               

               Cow position:
               chr25:40388461-40388735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               23, 83
               

               Conread position:
               270-542
               

               Cow position:
               chr25:12824021-12824285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 143
               

               Conread position:
               273-546
               

               Cow position:
               chr25:40151391-40151125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 55
               

               Conread position:
               274-550
               

               Cow position:
               chr25:15411770-15412054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               275-463
               

               Cow position:
               chr25:23323197-23323010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               88, 95
               

               Conread position:
               275-487
               

               Cow position:
               chr25:11978710-11978917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               275-539
               

               Cow position:
               chr25:35625187-35625438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 68
               

               Conread position:
               277-516
               

               Cow position:
               chr25:38972826-38972585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               28, 45
               

               Conread position:
               278-551
               

               Cow position:
               chr25:15694968-15694704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               8, 14
               

               Conread position:
               290-551
               

               Cow position:
               chr25:9847766-9847505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               98, 117
               

               Conread position:
               291-520
               

               Cow position:
               chr25:16001548-16001773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               169, 123
               

               Conread position:
               292-497
               

               Cow position:
               chr25:12239174-12239376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               70, 8
               

               Conread position:
               294-525
               

               Cow position:
               chr25:4002774-4002539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               95, 126
               

               Conread position:
               296-506
               

               Cow position:
               chr25:20395163-20394966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               160, 72
               

               Conread position:
               296-551
               

               Cow position:
               chr25:26654880-26654628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               82, 6
               

               Conread position:
               300-519
               

               Cow position:
               chr25:26757404-26757188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               157, 64
               

               Conread position:
               301-551
               

               Cow position:
               chr25:40957021-40957265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               64, 128
               

               Conread position:
               302-506
               

               Cow position:
               chr25:7329512-7329307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               158, 44
               

               Conread position:
               302-545
               

               Cow position:
               chr25:5791836-5792081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               75, 22
               

               Conread position:
               303-551
               

               Cow position:
               chr25:8347473-8347230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               114, 86
               

               Conread position:
               304-506
               

               Cow position:
               chr25:2136317-2136114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               93, 145
               

               Conread position:
               305-503
               

               Cow position:
               chr25:14570334-14570135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 59
               

               Conread position:
               305-550
               

               Cow position:
               chr25:10365790-10366030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               74, 30
               

               Conread position:
               305-551
               

               Cow position:
               chr25:12204432-12204191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               77, 113
               

               Conread position:
               306-506
               

               Cow position:
               chr25:36026970-36026770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               72, 121
               

               Conread position:
               314-542
               

               Cow position:
               chr25:12756611-12756839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 57
               

               Conread position:
               316-539
               

               Cow position:
               chr25:17712488-17712261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               88, 68
               

               Conread position:
               325-551
               

               Cow position:
               chr25:12195385-12195604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               183, 89
               

               Conread position:
               327-542
               

               Cow position:
               chr25:6003051-6003261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               129, 36
               

               Conread position:
               336-551
               

               Cow position:
               chr25:2111008-2110804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               114, 94
               
Show alignments to all cow chromosomes.