Cow genome map

Conread name: Pig1-35E01

Conread position: 38-551
Cow position: chr27:31231366-31230859 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 17

Conread position: 59-520
Cow position: chr27:15669040-15668561 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 172

Conread position: 63-323
Cow position: chr27:11982910-11982638 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 162

Conread position: 63-323
Cow position: chr27:31210289-31210558 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 23

Conread position: 63-335
Cow position: chr27:20897282-20897001 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 104

Conread position: 63-406
Cow position: chr27:23510713-23511083 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 34, 227

Conread position: 63-551
Cow position: chr27:8962502-8962036 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 64-551
Cow position: chr27:15870901-15871395 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 323
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 25

Conread position: 65-312
Cow position: chr27:31169366-31169116 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 163

Conread position: 65-440
Cow position: chr27:14343695-14343339 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 263
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 32, 108

Conread position: 65-549
Cow position: chr27:30890042-30890517 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 21

Conread position: 66-302
Cow position: chr27:7343687-7343444 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 34, 123

Conread position: 66-419
Cow position: chr27:23594060-23594422 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 254
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 31, 110

Conread position: 66-507
Cow position: chr27:20628798-20629224 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 317
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 10, 172

Conread position: 66-551
Cow position: chr27:23128208-23128690 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 323
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 14

Conread position: 66-551
Cow position: chr27:28922154-28921663 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 169

Conread position: 67-332
Cow position: chr27:12459034-12459304 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 20

Conread position: 67-551
Cow position: chr27:22220291-22220787 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 170

Conread position: 68-294
Cow position: chr27:6106447-6106676 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 14, 99

Conread position: 68-544
Cow position: chr27:1353322-1353809 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 339
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 29, 168

Conread position: 68-551
Cow position: chr27:26441286-26440825 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 327
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 32, 79

Conread position: 69-268
Cow position: chr27:11133831-11134037 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 104

Conread position: 69-290
Cow position: chr27:24223700-24223926 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 11

Conread position: 69-346
Cow position: chr27:23560284-23559997 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 11

Conread position: 69-357
Cow position: chr27:23484959-23485257 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 113

Conread position: 69-417
Cow position: chr27:22386630-22386974 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 9, 74

Conread position: 69-425
Cow position: chr27:26226543-26226178 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 43, 104

Conread position: 69-440
Cow position: chr27:16103554-16103931 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 111

Conread position: 69-454
Cow position: chr27:17331236-17331640 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 21, 33

Conread position: 69-474
Cow position: chr27:16780602-16781024 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 298
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 12, 38

Conread position: 69-478
Cow position: chr27:4944763-4944365 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 289
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 74

Conread position: 69-506
Cow position: chr27:28002058-28001627 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 294
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 28, 17

Conread position: 69-536
Cow position: chr27:19387765-19388241 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 78

Conread position: 69-540
Cow position: chr27:22180022-22179575 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 326
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 28, 63

Conread position: 69-549
Cow position: chr27:22035627-22035142 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 97

Conread position: 69-550
Cow position: chr27:7935411-7934931 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 324
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 29

Conread position: 69-551
Cow position: chr27:6550205-6550684 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 27

Conread position: 69-551
Cow position: chr27:15453957-15454446 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 107

Conread position: 69-551
Cow position: chr27:16284234-16284706 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 69-551
Cow position: chr27:26224512-26224036 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 315
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 66

Conread position: 69-552
Cow position: chr27:17472558-17473047 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 332
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 28, 105

Conread position: 70-306
Cow position: chr27:31556839-31557063 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 91

Conread position: 70-328
Cow position: chr27:19508757-19509030 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 27, 158

Conread position: 70-511
Cow position: chr27:27554933-27554490 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 293
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 42, 10

Conread position: 70-520
Cow position: chr27:17397706-17397243 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 105

Conread position: 70-550
Cow position: chr27:14670635-14670150 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 101

Conread position: 71-278
Cow position: chr27:19576577-19576363 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 97

Conread position: 71-329
Cow position: chr27:26617160-26617416 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 10, 101

Conread position: 71-417
Cow position: chr27:29504884-29504543 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 76

Conread position: 71-496
Cow position: chr27:13251777-13252191 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 281
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 94, 27

Conread position: 71-551
Cow position: chr27:7212984-7212489 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 358
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 178

Conread position: 73-339
Cow position: chr27:12709990-12710268 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 27, 113

Conread position: 75-533
Cow position: chr27:22547638-22547188 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 103

Conread position: 77-512
Cow position: chr27:22330906-22330472 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 282
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 66

Conread position: 77-549
Cow position: chr27:21669359-21668894 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 86

Conread position: 77-551
Cow position: chr27:26424827-26424356 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 97

Conread position: 78-481
Cow position: chr27:26425976-26426375 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 276
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 19, 45

Conread position: 80-263
Cow position: chr27:27529059-27528874 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 37

Conread position: 80-345
Cow position: chr27:19932821-19933097 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 156

Conread position: 80-477
Cow position: chr27:27460823-27460410 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 198

Conread position: 80-497
Cow position: chr27:22513926-22513493 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 297
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 156

Conread position: 80-503
Cow position: chr27:18031315-18030868 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 292
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 147

Conread position: 80-517
Cow position: chr27:27245607-27245149 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 312
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 17, 163

Conread position: 80-520
Cow position: chr27:20283399-20283837 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 305
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 17, 70

Conread position: 80-537
Cow position: chr27:2957172-2957627 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 313
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 17, 147

Conread position: 80-542
Cow position: chr27:13639232-13638768 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 325
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 17, 156

Conread position: 80-551
Cow position: chr27:7412149-7412616 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 87

Conread position: 80-551
Cow position: chr27:10979615-10980097 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 155

Conread position: 80-551
Cow position: chr27:26434058-26433579 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 158

Conread position: 80-551
Cow position: chr27:26643458-26643906 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 55

Conread position: 80-551
Cow position: chr27:28190436-28189984 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 311
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 17, 73

Conread position: 81-308
Cow position: chr27:6319679-6319910 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 84

Conread position: 81-353
Cow position: chr27:4720370-4720072 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 145

Conread position: 81-520
Cow position: chr27:30914763-30915207 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 299
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 154

Conread position: 81-551
Cow position: chr27:7959076-7958602 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 323
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 14, 113

Conread position: 81-551
Cow position: chr27:29494142-29493681 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 322
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 16, 58

Conread position: 82-267
Cow position: chr27:2949559-2949377 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 76

Conread position: 82-302
Cow position: chr27:15003222-15002994 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 151

Conread position: 82-387
Cow position: chr27:591011-590693 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 10, 19

Conread position: 82-496
Cow position: chr27:8353252-8353658 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 63

Conread position: 82-516
Cow position: chr27:16478565-16478146 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 307
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 15, 85

Conread position: 82-532
Cow position: chr27:31219031-31219455 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 305
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 20

Conread position: 82-549
Cow position: chr27:27389270-27388797 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 154

Conread position: 82-551
Cow position: chr27:22171059-22171532 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 85

Conread position: 82-551
Cow position: chr27:23452220-23452713 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 90

Conread position: 83-520
Cow position: chr27:18558116-18558570 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 309
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 152

Conread position: 83-551
Cow position: chr27:19717656-19718152 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 161

Conread position: 85-541
Cow position: chr27:27632833-27632386 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 52

Conread position: 86-356
Cow position: chr27:29593867-29593585 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 141

Conread position: 86-486
Cow position: chr27:15409263-15408872 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 287
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 11, 6

Conread position: 96-399
Cow position: chr27:15378709-15378392 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 137

Conread position: 96-423
Cow position: chr27:27695003-27694662 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 16, 83

Conread position: 96-519
Cow position: chr27:19685938-19685509 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 25

Conread position: 96-541
Cow position: chr27:19660700-19661166 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 134

Conread position: 99-454
Cow position: chr27:23890708-23891075 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 13, 132

Conread position: 99-462
Cow position: chr27:22735819-22735456 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 241
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 135

Conread position: 99-513
Cow position: chr27:18739149-18739586 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 289
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 135

Conread position: 99-534
Cow position: chr27:26238799-26239245 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 133

Conread position: 103-520
Cow position: chr27:12596564-12596962 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 280
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 94, 36

Conread position: 104-551
Cow position: chr27:11536324-11535864 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 315
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 50, 126

Conread position: 108-356
Cow position: chr27:23108115-23107858 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 151

Conread position: 108-454
Cow position: chr27:26490118-26489764 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 230
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 69, 54

Conread position: 108-551
Cow position: chr27:2930804-2930363 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 297
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 123

Conread position: 108-551
Cow position: chr27:6541422-6541858 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 297
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 100, 60

Conread position: 108-551
Cow position: chr27:24331501-24331959 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 317
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 29, 127

Conread position: 115-411
Cow position: chr27:20481562-20481279 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 252, 52

Conread position: 117-542
Cow position: chr27:23483027-23483447 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 36

Conread position: 124-551
Cow position: chr27:26807756-26807330 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 270
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 152, 98

Conread position: 125-551
Cow position: chr27:6454014-6454446 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 295
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 38, 24

Conread position: 130-551
Cow position: chr27:29831889-29831455 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 301
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 99

Conread position: 137-350
Cow position: chr27:20517483-20517696 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 151, 34

Conread position: 137-377
Cow position: chr27:31018008-31017770 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 32

Conread position: 137-547
Cow position: chr27:27641191-27640758 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 42

Conread position: 139-318
Cow position: chr27:30489589-30489414 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 59, 33

Conread position: 139-454
Cow position: chr27:16589883-16589575 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 29

Conread position: 139-505
Cow position: chr27:22454955-22454590 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 55, 38

Conread position: 139-526
Cow position: chr27:30988619-30989007 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 90

Conread position: 139-545
Cow position: chr27:20795610-20796011 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 70

Conread position: 139-551
Cow position: chr27:22723873-22723473 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 288
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 40, 28

Conread position: 140-549
Cow position: chr27:27039016-27038611 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 283
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 9, 23

Conread position: 143-441
Cow position: chr27:22569609-22569898 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 61, 5

Conread position: 143-542
Cow position: chr27:4835782-4835382 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 34

Conread position: 144-295
Cow position: chr27:788970-788820 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 24

Conread position: 144-424
Cow position: chr27:31148588-31148871 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 80

Conread position: 145-376
Cow position: chr27:26407332-26407102 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 26

Conread position: 145-520
Cow position: chr27:23882540-23882168 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 265
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 54, 17

Conread position: 148-517
Cow position: chr27:4819885-4819509 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 257
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 234

Conread position: 149-546
Cow position: chr27:4672843-4673249 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 13

Conread position: 153-551
Cow position: chr27:21393671-21393271 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 282
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 8

Conread position: 157-543
Cow position: chr27:24321025-24321413 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 86

Conread position: 162-520
Cow position: chr27:12246496-12246866 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 257
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 25, 74

Conread position: 162-541
Cow position: chr27:20549869-20549469 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 280
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 36, 113

Conread position: 163-331
Cow position: chr27:237114-237288 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 109

Conread position: 163-551
Cow position: chr27:4829964-4829577 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 286
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 21

Conread position: 168-551
Cow position: chr27:1122880-1123254 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 59

Conread position: 170-505
Cow position: chr27:26150868-26151210 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 250
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 28, 59

Conread position: 172-494
Cow position: chr27:3758-4067 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 125, 28

Conread position: 172-534
Cow position: chr27:20553584-20553933 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 25, 55

Conread position: 189-427
Cow position: chr27:28245675-28245915 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 35

Conread position: 191-506
Cow position: chr27:11296146-11296449 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 100, 26

Conread position: 196-375
Cow position: chr27:8405941-8405763 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 100, 26

Conread position: 196-427
Cow position: chr27:16625781-16626010 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 26

Conread position: 196-520
Cow position: chr27:1498197-1498520 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 25

Conread position: 196-551
Cow position: chr27:23472140-23472489 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 26

Conread position: 196-551
Cow position: chr27:24014858-24014508 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 26

Conread position: 200-488
Cow position: chr27:6159865-6160155 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 70, 22

Conread position: 201-485
Cow position: chr27:27613734-27613468 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 255, 18

Conread position: 201-520
Cow position: chr27:30550876-30551202 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 45, 72

Conread position: 201-542
Cow position: chr27:4812997-4812651 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 23

Conread position: 203-538
Cow position: chr27:12429295-12429628 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 22

Conread position: 203-551
Cow position: chr27:9090902-9090568 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 19

Conread position: 206-480
Cow position: chr27:23662702-23662439 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 158, 16

Conread position: 207-551
Cow position: chr27:11081093-11081429 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 233
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 17

Conread position: 207-551
Cow position: chr27:26413362-26413022 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 82, 15

Conread position: 208-550
Cow position: chr27:22426939-22426598 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 233
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 16

Conread position: 214-454
Cow position: chr27:20789482-20789242 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 84, 56

Conread position: 219-373
Cow position: chr27:24306731-24306888 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 20

Conread position: 219-537
Cow position: chr27:30354442-30354126 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 91, 50

Conread position: 219-551
Cow position: chr27:21351119-21350782 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 17

Conread position: 219-551
Cow position: chr27:23576636-23576306 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 87, 53

Conread position: 235-517
Cow position: chr27:2683227-2682940 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 36

Conread position: 244-541
Cow position: chr27:6522971-6523269 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 70, 26

Conread position: 245-461
Cow position: chr27:154291-154513 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 25

Conread position: 247-537
Cow position: chr27:27259544-27259827 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 23

Conread position: 259-551
Cow position: chr27:30560861-30561149 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 19, 11

Conread position: 269-516
Cow position: chr27:27003313-27003079 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 233, 12

Conread position: 274-538
Cow position: chr27:27040558-27040829 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 165

Conread position: 276-505
Cow position: chr27:20591945-20592174 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 112, 26

Conread position: 283-533
Cow position: chr27:27528384-27528146 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 82

Conread position: 285-520
Cow position: chr27:16871939-16871713 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 175, 10

Conread position: 286-551
Cow position: chr27:30856412-30856158 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 70

Conread position: 288-542
Cow position: chr27:22498534-22498779 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 168, 16

Conread position: 289-517
Cow position: chr27:29250855-29251083 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 171, 11

Conread position: 291-535
Cow position: chr27:8430460-8430222 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 159, 73

Conread position: 292-520
Cow position: chr27:28164425-28164205 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 164, 32

Conread position: 292-522
Cow position: chr27:27055553-27055786 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 164, 0

Conread position: 296-517
Cow position: chr27:27053277-27053500 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 70

Conread position: 300-503
Cow position: chr27:911097-910896 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 13

Conread position: 301-551
Cow position: chr27:26935920-26935685 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 159, 15

Conread position: 303-547
Cow position: chr27:27737936-27737704 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 85

Conread position: 305-496
Cow position: chr27:27550750-27550566 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 151, 75

Conread position: 305-519
Cow position: chr27:29399807-29400022 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 84, 110

Conread position: 305-520
Cow position: chr27:28038349-28038131 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 151, 0

Conread position: 312-506
Cow position: chr27:22771750-22771949 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 335-520
Cow position: chr27:1884063-1884244 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 149, 19

Show alignments to all cow chromosomes.