Cow genome map

Conread name: Pig1-35E01

Conread position: 13-515
Cow position: chr28:5074247-5074742 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 46

Conread position: 21-344
Cow position: chr28:7618899-7619222 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 233
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 76, 22

Conread position: 50-268
Cow position: chr28:9109443-9109226 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 12

Conread position: 50-454
Cow position: chr28:4881015-4881420 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 282
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 14, 29

Conread position: 50-515
Cow position: chr28:9636222-9636696 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 36

Conread position: 59-294
Cow position: chr28:29850595-29850830 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 136

Conread position: 60-496
Cow position: chr28:18625452-18625003 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 301
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 77, 49

Conread position: 60-551
Cow position: chr28:10588811-10589300 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 348
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 20

Conread position: 61-549
Cow position: chr28:26615078-26614626 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 334
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 98

Conread position: 61-551
Cow position: chr28:2960589-2961093 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 178

Conread position: 62-356
Cow position: chr28:5138775-5139078 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 35, 113

Conread position: 62-387
Cow position: chr28:25129110-25128771 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 27, 111

Conread position: 62-454
Cow position: chr28:13289933-13290310 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 280
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 28, 36

Conread position: 62-476
Cow position: chr28:27313505-27313948 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 288
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 35, 173

Conread position: 63-272
Cow position: chr28:8936373-8936154 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 106

Conread position: 65-551
Cow position: chr28:11584990-11585479 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 93

Conread position: 66-406
Cow position: chr28:8140702-8140351 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 46, 34

Conread position: 66-551
Cow position: chr28:7697759-7698252 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 167

Conread position: 66-551
Cow position: chr28:12964802-12964306 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 161

Conread position: 66-551
Cow position: chr28:22332749-22332279 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 167

Conread position: 67-304
Cow position: chr28:11987382-11987149 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 72

Conread position: 67-304
Cow position: chr28:12055620-12055387 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 72

Conread position: 67-545
Cow position: chr28:16204113-16204601 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 29

Conread position: 68-549
Cow position: chr28:21845166-21844687 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 21

Conread position: 68-551
Cow position: chr28:21103601-21104118 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 172

Conread position: 69-262
Cow position: chr28:3678576-3678377 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 28, 70

Conread position: 69-315
Cow position: chr28:5255089-5254839 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 17, 104

Conread position: 69-357
Cow position: chr28:7927381-7927092 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 33

Conread position: 69-420
Cow position: chr28:10863582-10863927 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 45

Conread position: 69-441
Cow position: chr28:29988891-29989279 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 112

Conread position: 69-453
Cow position: chr28:4159182-4158781 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 286
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 14, 173

Conread position: 69-462
Cow position: chr28:11828742-11829126 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 166

Conread position: 69-488
Cow position: chr28:12598550-12598134 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 273
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 35, 20

Conread position: 69-503
Cow position: chr28:4884036-4884494 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 300

Conread position: 69-545
Cow position: chr28:33884620-33884144 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 124

Conread position: 69-550
Cow position: chr28:11426331-11426815 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 74

Conread position: 69-551
Cow position: chr28:10615737-10616221 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 332
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 70, 11

Conread position: 69-551
Cow position: chr28:20124999-20124515 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 160

Conread position: 69-551
Cow position: chr28:24966604-24966117 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 104

Conread position: 70-288
Cow position: chr28:24646798-24646584 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 22

Conread position: 70-336
Cow position: chr28:133862-134132 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 94

Conread position: 70-337
Cow position: chr28:7131875-7132138 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 95

Conread position: 70-462
Cow position: chr28:26982520-26982930 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 105

Conread position: 70-480
Cow position: chr28:4089848-4090248 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 10

Conread position: 70-503
Cow position: chr28:8347947-8347508 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 70-506
Cow position: chr28:11884314-11884752 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 90

Conread position: 70-551
Cow position: chr28:4071174-4070690 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 75

Conread position: 70-551
Cow position: chr28:4282272-4282763 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 160

Conread position: 71-311
Cow position: chr28:6975447-6975209 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 25

Conread position: 71-329
Cow position: chr28:7557512-7557777 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 168

Conread position: 71-357
Cow position: chr28:7350865-7350575 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 103

Conread position: 71-453
Cow position: chr28:4643555-4643939 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 262
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 161

Conread position: 71-520
Cow position: chr28:21502597-21502151 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 301
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 70

Conread position: 72-296
Cow position: chr28:17740039-17739808 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 104

Conread position: 72-400
Cow position: chr28:11079514-11079181 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 100

Conread position: 72-551
Cow position: chr28:5204399-5203931 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 41

Conread position: 73-283
Cow position: chr28:30902334-30902122 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 71

Conread position: 73-551
Cow position: chr28:16918960-16919435 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 72

Conread position: 74-552
Cow position: chr28:5684912-5684432 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 90

Conread position: 75-374
Cow position: chr28:3011056-3011372 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 22, 161

Conread position: 75-502
Cow position: chr28:4016734-4016304 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 65

Conread position: 75-506
Cow position: chr28:26340545-26340107 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 290
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 22, 159

Conread position: 75-540
Cow position: chr28:29416514-29416979 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 119

Conread position: 75-551
Cow position: chr28:13474510-13474037 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 75-551
Cow position: chr28:21868668-21868180 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 98

Conread position: 76-539
Cow position: chr28:19025799-19026262 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 50

Conread position: 77-338
Cow position: chr28:4823810-4823543 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 71

Conread position: 77-512
Cow position: chr28:12951625-12951198 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 301
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 114

Conread position: 77-540
Cow position: chr28:3492578-3493044 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 102

Conread position: 78-412
Cow position: chr28:7008773-7009112 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 224
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 87

Conread position: 80-338
Cow position: chr28:3410783-3411055 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 105

Conread position: 80-340
Cow position: chr28:10978044-10977777 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 107

Conread position: 80-341
Cow position: chr28:4013289-4013020 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 97

Conread position: 80-363
Cow position: chr28:4182207-4181915 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 17, 152

Conread position: 80-463
Cow position: chr28:4834636-4835030 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 50

Conread position: 80-486
Cow position: chr28:5436880-5437301 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 151

Conread position: 80-516
Cow position: chr28:26220457-26220021 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 45

Conread position: 80-527
Cow position: chr28:11422613-11423055 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 35

Conread position: 80-550
Cow position: chr28:25057162-25056701 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 89

Conread position: 80-551
Cow position: chr28:8787745-8787279 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 95

Conread position: 80-551
Cow position: chr28:14998268-14997793 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 16

Conread position: 81-351
Cow position: chr28:3741073-3740804 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 31, 61

Conread position: 81-520
Cow position: chr28:5236390-5236844 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 306
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 17, 155

Conread position: 81-542
Cow position: chr28:23460349-23459876 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 115

Conread position: 82-288
Cow position: chr28:5805866-5805662 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 82

Conread position: 82-387
Cow position: chr28:5577736-5577413 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 94

Conread position: 82-454
Cow position: chr28:657262-657623 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 253
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 78

Conread position: 82-474
Cow position: chr28:4809974-4809596 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 27

Conread position: 82-504
Cow position: chr28:10053128-10053566 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 299
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 15, 75

Conread position: 82-551
Cow position: chr28:12430808-12430338 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 82-551
Cow position: chr28:23616609-23616131 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 317
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 15, 143

Conread position: 83-506
Cow position: chr28:3746400-3745972 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 67

Conread position: 83-537
Cow position: chr28:24343555-24343109 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 296
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 9

Conread position: 83-551
Cow position: chr28:23007539-23007999 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 317
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 15, 88

Conread position: 84-520
Cow position: chr28:9740660-9740227 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 111

Conread position: 84-527
Cow position: chr28:9285175-9285630 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 64

Conread position: 84-551
Cow position: chr28:3023714-3024183 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 139

Conread position: 84-551
Cow position: chr28:24672470-24672002 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 317
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 196

Conread position: 96-429
Cow position: chr28:24082459-24082116 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 78

Conread position: 96-551
Cow position: chr28:3914894-3914439 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 99-336
Cow position: chr28:26531095-26531343 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 40, 71

Conread position: 99-525
Cow position: chr28:16346352-16346775 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 61

Conread position: 99-551
Cow position: chr28:21363926-21363487 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 308
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 40, 127

Conread position: 101-518
Cow position: chr28:22346206-22345777 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 133

Conread position: 105-551
Cow position: chr28:16210924-16211368 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 78

Conread position: 108-333
Cow position: chr28:3445306-3445541 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 122

Conread position: 108-475
Cow position: chr28:4138493-4138868 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 252
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 82

Conread position: 108-512
Cow position: chr28:34430249-34430663 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 277
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 84

Conread position: 108-516
Cow position: chr28:4913918-4914342 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 281
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 50, 107

Conread position: 115-518
Cow position: chr28:11686851-11687275 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 289
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 38, 191

Conread position: 116-551
Cow position: chr28:30303042-30303464 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 52

Conread position: 124-520
Cow position: chr28:16386361-16386750 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 258
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 56, 103

Conread position: 124-551
Cow position: chr28:15043714-15044127 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 290
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 176, 16

Conread position: 130-520
Cow position: chr28:25596775-25596388 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 281
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 68, 32

Conread position: 131-520
Cow position: chr28:10172268-10172658 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 41

Conread position: 133-542
Cow position: chr28:10745356-10744947 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 278
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 165, 25

Conread position: 133-551
Cow position: chr28:26743772-26743351 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 35

Conread position: 135-551
Cow position: chr28:7548916-7549333 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 21

Conread position: 137-551
Cow position: chr28:6971206-6971610 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 34

Conread position: 138-551
Cow position: chr28:4188694-4188255 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 313
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 31

Conread position: 139-361
Cow position: chr28:27161187-27161414 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 48, 23

Conread position: 139-449
Cow position: chr28:2752352-2752671 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 48, 79

Conread position: 139-541
Cow position: chr28:8021960-8022372 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 84

Conread position: 139-551
Cow position: chr28:19222008-19222416 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 89

Conread position: 140-520
Cow position: chr28:19079706-19080092 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 268
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 85

Conread position: 140-551
Cow position: chr28:25763164-25762758 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 278
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 91

Conread position: 141-509
Cow position: chr28:2131786-2132153 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 21

Conread position: 142-520
Cow position: chr28:14649482-14649103 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 100

Conread position: 145-551
Cow position: chr28:23410189-23410596 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 291
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 42, 17

Conread position: 146-535
Cow position: chr28:33052169-33051765 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 25

Conread position: 146-551
Cow position: chr28:21355364-21354953 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 286
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 27, 77

Conread position: 147-551
Cow position: chr28:12619707-12619291 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 7

Conread position: 149-356
Cow position: chr28:12070361-12070154 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 49, 23

Conread position: 153-551
Cow position: chr28:11752011-11752416 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 74

Conread position: 155-505
Cow position: chr28:33163339-33163696 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 12, 71

Conread position: 155-549
Cow position: chr28:28164213-28163827 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 288
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 76

Conread position: 157-425
Cow position: chr28:18186678-18186403 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 16

Conread position: 159-551
Cow position: chr28:5128605-5128998 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 70

Conread position: 162-514
Cow position: chr28:13865956-13865607 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 247
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 15

Conread position: 162-551
Cow position: chr28:7865448-7865057 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 113

Conread position: 163-370
Cow position: chr28:16245947-16246158 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 64

Conread position: 169-520
Cow position: chr28:23621646-23621304 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 27, 42

Conread position: 172-535
Cow position: chr28:2862977-2862606 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 57

Conread position: 177-433
Cow position: chr28:2873022-2872760 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 7

Conread position: 187-486
Cow position: chr28:25283283-25282995 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 202
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 35

Conread position: 189-551
Cow position: chr28:21598163-21598524 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 37

Conread position: 191-551
Cow position: chr28:14151307-14150963 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 273, 33

Conread position: 194-444
Cow position: chr28:3169107-3169361 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 28

Conread position: 195-539
Cow position: chr28:26922287-26922623 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 110, 27

Conread position: 196-439
Cow position: chr28:32365924-32365681 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 101, 26

Conread position: 196-492
Cow position: chr28:24018064-24017788 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 170, 26

Conread position: 196-530
Cow position: chr28:8408814-8408486 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 94, 26

Conread position: 196-548
Cow position: chr28:21672873-21672531 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 101, 26

Conread position: 196-551
Cow position: chr28:4536539-4536199 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 48, 26

Conread position: 196-551
Cow position: chr28:18591350-18590999 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 22

Conread position: 198-518
Cow position: chr28:10529411-10529725 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 215
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 74, 16

Conread position: 201-520
Cow position: chr28:13607973-13607641 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 41, 23

Conread position: 202-376
Cow position: chr28:12363083-12363262 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 20

Conread position: 202-506
Cow position: chr28:14508295-14508595 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 203
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 67

Conread position: 202-551
Cow position: chr28:13267863-13267509 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 20

Conread position: 219-495
Cow position: chr28:2737747-2738030 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 51

Conread position: 219-550
Cow position: chr28:4588156-4587826 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 20

Conread position: 219-551
Cow position: chr28:10533876-10534200 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 86

Conread position: 221-551
Cow position: chr28:7751244-7751572 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 19

Conread position: 221-551
Cow position: chr28:34442701-34443035 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 84, 59

Conread position: 223-551
Cow position: chr28:3000553-3000882 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 237, 73

Conread position: 224-506
Cow position: chr28:23776095-23775816 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 184
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 62, 73

Conread position: 242-551
Cow position: chr28:5904768-5904465 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 63, 28

Conread position: 249-428
Cow position: chr28:7607947-7608133 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 21

Conread position: 250-551
Cow position: chr28:15063311-15063610 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 20

Conread position: 256-520
Cow position: chr28:24646561-24646296 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 14

Conread position: 263-520
Cow position: chr28:2905590-2905336 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 14

Conread position: 274-421
Cow position: chr28:10202479-10202335 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 64

Conread position: 275-551
Cow position: chr28:5805507-5805254 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 275-551
Cow position: chr28:23480254-23480532 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 149

Conread position: 277-454
Cow position: chr28:26264803-26264628 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 36

Conread position: 278-513
Cow position: chr28:5658545-5658317 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 0

Conread position: 284-551
Cow position: chr28:19515394-19515663 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 229

Conread position: 285-520
Cow position: chr28:27428731-27428508 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 224, 13

Conread position: 287-551
Cow position: chr28:2814521-2814770 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 183, 13

Conread position: 291-551
Cow position: chr28:25411862-25411602 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 176
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 232

Conread position: 294-541
Cow position: chr28:11451483-11451728 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 95, 33

Conread position: 296-506
Cow position: chr28:7980442-7980648 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 160, 39

Conread position: 296-520
Cow position: chr28:13901988-13902203 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 65

Conread position: 296-551
Cow position: chr28:26784486-26784739 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 82, 134

Conread position: 300-506
Cow position: chr28:6051710-6051503 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 45

Conread position: 302-497
Cow position: chr28:9108419-9108221 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 146, 0

Conread position: 305-454
Cow position: chr28:118082-118231 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 98

Conread position: 305-551
Cow position: chr28:15008131-15007890 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 31, 26

Conread position: 305-552
Cow position: chr28:23840171-23839936 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 155, 72

Conread position: 309-542
Cow position: chr28:12048738-12048961 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 311-517
Cow position: chr28:8681878-8682092 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 95, 155

Conread position: 312-542
Cow position: chr28:16243796-16244021 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 50

Conread position: 316-532
Cow position: chr28:13241869-13242076 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 82

Conread position: 316-551
Cow position: chr28:17738115-17738350 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 62, 204

Conread position: 319-541
Cow position: chr28:4888795-4889017 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 204

Conread position: 337-551
Cow position: chr28:16441321-16441116 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 94

Show alignments to all cow chromosomes.